Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d020013_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:7:85541796:85550393:-1 gene:Zm00001d020013 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger (C3HC4-type RING finger) family protein
Sequence	ATGCCCTACTTCCTGATCTCCCACTCCGCACTGAATGCGCCTGATGGAGAGCAGCAAAAG ATGGAGGAACCCACCAGCACCAGAGTGGCTGACAAGAATCTATGTGCAATATGTTTGGAA CTCCTCAGCACGAGCATCAGCAGCGATGTTGACAGTGGTGAGGCGGCAGCAATCTACACA GCGCAGTGCTCCCACTCATTCCACTTCCTATGCATCGCCTCCAACATCCGGCATGGCAAC GTCAGCTGCCCTATCTGCCGTGCACAATGGTCTGAGCTACCACGTGACCTGAAGGTTCCA CCATTGCTGCACAACCAGTCAGACCCAATCCTTCGCATCCTGGACGACAACATTGCGTCA TCCCGTGTGAACCGAAGGTCCTCCATCCGTGCTGCTCGCTACAACGATGATGACCCGGTA GAGCCTTTCACCTTGGCTGAGCATGTGGATCCATGTCTCCGCTTTGTCCTCATCCCGGCA CCGGTGTCAGCTCACCATCACGTCCTCGGGCATTACCCCTGTGGACGCATGTTGCCACTG CAACAGCCATGCCAGTACAGCGGCTCCTCCATGCTTTCACCACCGCAGATTGCTTCGCCA AGTGGTCAAAGGCGAGCCTACCTCTCTGTCAGTCTTGCTCCACAGCCAGCCATGGACCTG GTCCTGGTTGCCAGCCCTAACGGACCACATCTGAGGCTCTTGAAGCAGGCAATGGCGCTT GTTGTCTTCTCCATGAGGGCAATTGACCGGTTAGCCATCGTCACGAATGCCACCACTGCA ACCCGTGCTTTCCCCTTGCGCCGGATGACGTCCCATGCAAAAAGAATGGCGCTGCAGGTT ATCGAACACCTTTGCTGTGTTGGTGGGACTGATCCAGTAGGGGCTCTGCACAAGGGCCTC AAGATATTGGAGGACCGGGCGCATCGGAACCCGAGCAACTGCATCCTTCACTTGTCTGAT CATCCAGTCCGCAACTGTGTTGGTGGTGTGGACATGAACCACTCCAGCATCCCAGTCCAC CAGTTCCATGTCGGGCTCGGGTTCGGTGTGCGGAGTGGATTTATCATGCATGAGTTTGAG GAGCTCCTCGCGCGGTTGCTTGGCGGCGTGATAGGCGACACCCAGCTGAGGATAGGGGAG CATGGCGGAATGGTCAGGCTTGGAGAGCTGAGGGGTGGTGAGGAGCGGAGGATACCGCTC GACCTTGCGGCAGATTGTGGCTTCATACTCGTTGGTTACAGTTACCTGGAGGGTGGAAGA GAGGAGCAGCTGAGGACAGGTGAGATCGCCGTCGGGTTCGAAGAGAAAGGTGACAACGGG TACTGTGGAATGAGAGAGATGGGGCTGAGCATTGGCGGCGAGAGGAGGAGCTGCTGCGCC GAGAGGCGGGACTACCATGACCCGTTCATGGCACGGCGATGGGCGAAGCATTTCAACGTG TACAGGGCCTGA

Peptide Sequence

PEP ID	Zm00001d020013_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:7:85541796:85550393:-1 gene:Zm00001d020013 transcript:Zm00001d020013_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger (C3HC4-type RING finger) family protein
Sequence	MPYFLISHSALNAPDGEQQKMEEPTSTRVADKNLCAICLELLSTSISSDVDSGEAAAIYT AQCSHSFHFLCIASNIRHGNVSCPICRAQWSELPRDLKVPPLLHNQSDPILRILDDNIAS SRVNRRSSIRAARYNDDDPVEPFTLAEHVDPCLRFVLIPAPVSAHHHVLGHYPCGRMLPL QQPCQYSGSSMLSPPQIASPSGQRRAYLSVSLAPQPAMDLVLVASPNGPHLRLLKQAMAL VVFSMRAIDRLAIVTNATTATRAFPLRRMTSHAKRMALQVIEHLCCVGGTDPVGALHKGL KILEDRAHRNPSNCILHLSDHPVRNCVGGVDMNHSSIPVHQFHVGLGFGVRSGFIMHEFE ELLARLLGGVIGDTQLRIGEHGGMVRLGELRGGEERRIPLDLAADCGFILVGYSYLEGGR EEQLRTGEIAVGFEEKGDNGYCGMREMGLSIGGERRSCCAERRDYHDPFMARRWAKHFNV YRA

Transcript Sequence

Transcript ID	Zm00001d020013_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:85541796:85550393:-1 gene:Zm00001d020013 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger (C3HC4-type RING finger) family protein
Sequence	ACATCGAAAGCACAAGTTCCTTCGCCTCCTTGCTTCTTTTACATTTCATCTCATCCAAAT GCCCTACTTCCTGATCTCCCACTCCGCACTGAATGCGCCTGATGGAGAGCAGCAAAAGAT GGAGGAACCCACCAGCACCAGAGTGGCTGACAAGAATCTATGTGCAATATGTTTGGAACT CCTCAGCACGAGCATCAGCAGCGATGTTGACAGTGGTGAGGCGGCAGCAATCTACACAGC GCAGTGCTCCCACTCATTCCACTTCCTATGCATCGCCTCCAACATCCGGCATGGCAACGT CAGCTGCCCTATCTGCCGTGCACAATGGTCTGAGCTACCACGTGACCTGAAGGTTCCACC ATTGCTGCACAACCAGTCAGACCCAATCCTTCGCATCCTGGACGACAACATTGCGTCATC CCGTGTGAACCGAAGGTCCTCCATCCGTGCTGCTCGCTACAACGATGATGACCCGGTAGA GCCTTTCACCTTGGCTGAGCATGTGGATCCATGTCTCCGCTTTGTCCTCATCCCGGCACC GGTGTCAGCTCACCATCACGTCCTCGGGCATTACCCCTGTGGACGCATGTTGCCACTGCA ACAGCCATGCCAGTACAGCGGCTCCTCCATGCTTTCACCACCGCAGATTGCTTCGCCAAG TGGTCAAAGGCGAGCCTACCTCTCTGTCAGTCTTGCTCCACAGCCAGCCATGGACCTGGT CCTGGTTGCCAGCCCTAACGGACCACATCTGAGGCTCTTGAAGCAGGCAATGGCGCTTGT TGTCTTCTCCATGAGGGCAATTGACCGGTTAGCCATCGTCACGAATGCCACCACTGCAAC CCGTGCTTTCCCCTTGCGCCGGATGACGTCCCATGCAAAAAGAATGGCGCTGCAGGTTAT CGAACACCTTTGCTGTGTTGGTGGGACTGATCCAGTAGGGGCTCTGCACAAGGGCCTCAA GATATTGGAGGACCGGGCGCATCGGAACCCGAGCAACTGCATCCTTCACTTGTCTGATCA TCCAGTCCGCAACTGTGTTGGTGGTGTGGACATGAACCACTCCAGCATCCCAGTCCACCA GTTCCATGTCGGGCTCGGGTTCGGTGTGCGGAGTGGATTTATCATGCATGAGTTTGAGGA GCTCCTCGCGCGGTTGCTTGGCGGCGTGATAGGCGACACCCAGCTGAGGATAGGGGAGCA TGGCGGAATGGTCAGGCTTGGAGAGCTGAGGGGTGGTGAGGAGCGGAGGATACCGCTCGA CCTTGCGGCAGATTGTGGCTTCATACTCGTTGGTTACAGTTACCTGGAGGGTGGAAGAGA GGAGCAGCTGAGGACAGGTGAGATCGCCGTCGGGTTCGAAGAGAAAGGTGACAACGGGTA CTGTGGAATGAGAGAGATGGGGCTGAGCATTGGCGGCGAGAGGAGGAGCTGCTGCGCCGA GAGGCGGGACTACCATGACCCGTTCATGGCACGGCGATGGGCGAAGCATTTCAACGTGTA CAGGGCCTGAGTAGAAGAGCTTGATCGTCAGCTGCTGCGAAATATGAGTCTTGTTGGTTT CTTTTCTCTCTTTTTTTCCCCATTCCTGCAAGCATCTAGGTTTGGTGTCTGCTTTTTGGC TTCTTTTGTTGTGGATCTGAATCCCTGTAAGATCTCTCTCTCTTTCTCTTTTTGCATGAA ATGTGTGGGTTCTGTCTGACAAAATCTGCTTGTGTTGTGTGAATCTGAACGTGAACAGAT CATACTGGAGAAAAAAAAGCAGCAAAACTAGAAATATTATTTGATTGAGCTTGCAAATTT GGAAGCCAGGGAGT