Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019920_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:7:75833180:75839365:-1 gene:Zm00001d019920 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SMG7
Sequence

ATGATGACCGTTCCCATGGATAGTGCTAGCGCAGCCCCGTCCTCTGCGCGGGACTTTGCT
GAGCGTCTCCTTACTAGGAATAATGAACTTGAAGATCAGCTTCGCAAGTCCGCACAATCC
AAAGTCCCATCAGATCCCAGCATATGGCTTCAGATGCGTGACAACTTTGAGAAGATTATT
CTCATAGATCATGACCTATCTGAACAGAAAGAGGTAGAGTATCTCCTATGGAAGTTGCAT
TACAAAAGAATTGAGGACTTCAGGAGGAGCATTAGTGCTGCAAGCTCAGCTGCATCTCAG
AGTGGGAAGAGCAACGCTAATCCAGATCGAGTCAAGAGAATTAAATTAACCTTCAAAAGC
TTCCTTTCAGAAGCAACTGGCTTCTATCACGACTTGATGTTAAAGATCAAATCAAATTTG
GGCCTTCCACTCAGTTACTTTCCAGAGGGCATCGACAATGCAAACAACTCTGCGCGAGAT
GACAAGACAACAGTGCAGTTGAAGAAAGGTTTGATTTCATGCCATCGCTGCCTGATATAT
TTGGGAGATCTTGCTCGTTACAAGAGCTCGCAAGGTGATGGTGATTCTGCTAGCCGTGAA
TACGCAGCGGCATCTAGTTACTACATGGAGGCTGCTTCTATCTATCCTTCCAGTGGCAAC
CCTCATCATCAGCTTGCTATACTAGCATCTTACTCAGGCAACGAGGTGGTAGCTGTTTAT
AGGTACTTCCGAAGCTTAGCTGCAGATACTCCTTTTACCACTGCACGTGACAACTTGATT
ATTCTTTTTGAAAAGAATCGCCAAAGCTATAGACAGCTGCCAGACAACAACAAAGTTCCC
AGCGCTAAGGCATTACCCCCACGGCTATCTGGGAGGGGACAAGGACGGGGAGAAGTAAAG
TTTCAGCCAAAAGATGTTAACGCAGAAGCAGCTGAAAGGGAACAGGAGTGCAATGTTCGT
GATACATTGAAGGCCTTCTATATACGATTTGTCAGGCTCACTGGAATTCTTTTCACGAGG
ACCAGTTTGGAAACATTTGGGGAGCTGTTTTCTTCAGTTAGCAATGATTTGCAGATTCTT
CTTTCTTCCGGTCTTGAGGAGGACCTTAATTTCGGTTCTGATGCTGCAGAAAATGCATTA
GCTGCTGTTAGGCTTACTATCATCCTTATATTCACAGTGCACAATGTAAATAAAGAACCT
GATAGCCAGTCATATTCTGAACTTGTGCAACGCAGAGTACTGCTCCAAAGTGCGTTTACG
GCTGCTTTTGATTTTGTTGGACGAATTCTCAGAAGGTGTTCAGAACTTGGTGATATCACA
TCAAGCTTCTATCTGCCAGCCATTCTGGTCTACATCGAATGGCTGGCGTCCCATCCAGAG
TTGGCTATTGACTCAGAGATGGAGGAACAGCATGCAAATGCCAGATCTTTCTTCTGGAAC
CAATGTATCTCATTTATGAATAAGTTGATCCTTACCAACCTTGCTTCTATGGAGGACAAT
GACGATGAGGCTTGCTTTTCTAATATGAGCATTTATGAGGAGGGTGAAACTGGGAACAGG
CTTGCCATTTGGGAAGATCTTGAATTGAGAGGTTTTTTGCCCTTGGTTCCTGCACATACC
ATTTTGGATTTCTCAAGCAAACACACATTTGGAAATGTTGGAAGCACCAAGGAGAAGAAA
GCACGGGTTCAACGAATTTTTGCTGCAGGAAAGTCACTGCTGAACTTTGTTCAGATTGAT
CAGTTGAGGATATATTTTGATCCATCTTTGAAAAAGTTTGTCTTGGCCAAGAACTCTCCT
GTTTCTAGAACTAACACCCCTCTTCATGAATCTCCTGATGCACTTAAAACAAATGGGACT
GAAATGGATCACAAGGCTGCTAGAAGATTTGATTCAGTTTCTTCTAATGTGGGCTCACTG
CAGTCTAAAGTGCAGTTTTGTCCTGATGGTGATGATGAAGAAGAAATTGTTTTCAAGCCA
ACAGCTTATGAGAAGTTTTCAAAAGTTTCTTCAGATCTGTCAGTTAATGGATACGTCCAT
CCTGTACCAGTGTCTGCTGCTGGTGGGCCAACCAATGCTAGTTTAGTGCCTGTTCAGAAC
ACTGCATCAATGTCTGCAACTGGTTTGCCATCCAATGGTGGGTCACTTCCAAGTACTGCA
TCTCTATCAGCTGCTGGTAATTACAACACTGATCAGTCGCTTCCCAGGTCGTCTGTTGGT
TGGACTGATTGGGCTGTCAATAGTGAGCAAAATGTTACTCCTAGCATTGCTCCAAGATTT
GAACTCATGCAGTCTGTTGAGGAGCCTGTTTCCAGCTGGACAAGCAGTGGGGCACAGCAT
GTTGGTCCTCAGCACAAGCACACAGGTTTAACTTTCCCAGATGTTGTCTCTGAACCATGT
GTATCTGCATCAATGGTTCAATGTTTTAGTAGCTCCGATTATTCGAAATTTCTCAGAGAA
CAAGAAATATTCTTAATGAATGGACTGAAGACTGTCAACATAACTGGAAATGGCTATCTA
GAGCAGAGATTGCAGCCTGGATTGAGTGGTTTACAGTCTATGGGTTATTCATCTCAGATA
CCTATTCAACCTGGTGGTACCACTGCAAACCTGATGCATAATCATGTCAAAATTACTGGA
GAGACTGTCCCCTCTACACTTGATTCAGTTGTACCTTCAATAGCACCATCAGGTGGCATG
CCAATCAAACTTACAGAAGCACCACTAACTGCTTCGAAGAAGAACCCTGTTAGTCGTCCA
TCAAAGCCTGTTGGACCACCTCCAGGATTTAATCATGTAACCCCAAAGCGTCAAGATGAT
TCTATTCCGGTTGAAAAACTGCAGAACCCACAGGTCGATGATTACAGCTGGCTAGATAGC
TATCAGCAATCGATTGATCATGTTCACAGCTTAAGAACTATTTATCCTGGTGTCAGTGAT
ACTAGCACTGCATTTGCCACTCCATTCTCTTTCCCTGGGAGGATACACACACAAGGGACC
AATGAAAAG

Peptide Sequence

PEP ID

Zm00001d019920_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:7:75833180:75839365:-1 gene:Zm00001d019920 transcript:Zm00001d019920_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SMG7
Sequence

MMTVPMDSASAAPSSARDFAERLLTRNNELEDQLRKSAQSKVPSDPSIWLQMRDNFEKII
LIDHDLSEQKEVEYLLWKLHYKRIEDFRRSISAASSAASQSGKSNANPDRVKRIKLTFKS
FLSEATGFYHDLMLKIKSNLGLPLSYFPEGIDNANNSARDDKTTVQLKKGLISCHRCLIY
LGDLARYKSSQGDGDSASREYAAASSYYMEAASIYPSSGNPHHQLAILASYSGNEVVAVY
RYFRSLAADTPFTTARDNLIILFEKNRQSYRQLPDNNKVPSAKALPPRLSGRGQGRGEVK
FQPKDVNAEAAEREQECNVRDTLKAFYIRFVRLTGILFTRTSLETFGELFSSVSNDLQIL
LSSGLEEDLNFGSDAAENALAAVRLTIILIFTVHNVNKEPDSQSYSELVQRRVLLQSAFT
AAFDFVGRILRRCSELGDITSSFYLPAILVYIEWLASHPELAIDSEMEEQHANARSFFWN
QCISFMNKLILTNLASMEDNDDEACFSNMSIYEEGETGNRLAIWEDLELRGFLPLVPAHT
ILDFSSKHTFGNVGSTKEKKARVQRIFAAGKSLLNFVQIDQLRIYFDPSLKKFVLAKNSP
VSRTNTPLHESPDALKTNGTEMDHKAARRFDSVSSNVGSLQSKVQFCPDGDDEEEIVFKP
TAYEKFSKVSSDLSVNGYVHPVPVSAAGGPTNASLVPVQNTASMSATGLPSNGGSLPSTA
SLSAAGNYNTDQSLPRSSVGWTDWAVNSEQNVTPSIAPRFELMQSVEEPVSSWTSSGAQH
VGPQHKHTGLTFPDVVSEPCVSASMVQCFSSSDYSKFLREQEIFLMNGLKTVNITGNGYL
EQRLQPGLSGLQSMGYSSQIPIQPGGTTANLMHNHVKITGETVPSTLDSVVPSIAPSGGM
PIKLTEAPLTASKKNPVSRPSKPVGPPPGFNHVTPKRQDDSIPVEKLQNPQVDDYSWLDS
YQQSIDHVHSLRTIYPGVSDTSTAFATPFSFPGRIHTQGTNEK

Transcript Sequence

Transcript ID

Zm00001d019920_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:75833180:75839365:-1 gene:Zm00001d019920 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SMG7
Sequence

AGTCCAATCCCAACACGGCGACGACGCCAGCGGAAATCGCATCGCCCTCTTCCTCTTTCC
CTCGCTGTGCAATCTCCCCCAAACTCCCCTCTCGAACCCTCGCTCTCGTCGCCAGAGCAA
GCAAAGCGCAGTTGCTGAAACCCGTGCGCTGTTGATGGATGATGACCGTTCCCATGGATA
GTGCTAGCGCAGCCCCGTCCTCTGCGCGGGACTTTGCTGAGCGTCTCCTTACTAGGAATA
ATGAACTTGAAGATCAGCTTCGCAAGTCCGCACAATCCAAAGTCCCATCAGATCCCAGCA
TATGGCTTCAGATGCGTGACAACTTTGAGAAGATTATTCTCATAGATCATGACCTATCTG
AACAGAAAGAGGTAGAGTATCTCCTATGGAAGTTGCATTACAAAAGAATTGAGGACTTCA
GGAGGAGCATTAGTGCTGCAAGCTCAGCTGCATCTCAGAGTGGGAAGAGCAACGCTAATC
CAGATCGAGTCAAGAGAATTAAATTAACCTTCAAAAGCTTCCTTTCAGAAGCAACTGGCT
TCTATCACGACTTGATGTTAAAGATCAAATCAAATTTGGGCCTTCCACTCAGTTACTTTC
CAGAGGGCATCGACAATGCAAACAACTCTGCGCGAGATGACAAGACAACAGTGCAGTTGA
AGAAAGGTTTGATTTCATGCCATCGCTGCCTGATATATTTGGGAGATCTTGCTCGTTACA
AGAGCTCGCAAGGTGATGGTGATTCTGCTAGCCGTGAATACGCAGCGGCATCTAGTTACT
ACATGGAGGCTGCTTCTATCTATCCTTCCAGTGGCAACCCTCATCATCAGCTTGCTATAC
TAGCATCTTACTCAGGCAACGAGGTGGTAGCTGTTTATAGGTACTTCCGAAGCTTAGCTG
CAGATACTCCTTTTACCACTGCACGTGACAACTTGATTATTCTTTTTGAAAAGAATCGCC
AAAGCTATAGACAGCTGCCAGACAACAACAAAGTTCCCAGCGCTAAGGCATTACCCCCAC
GGCTATCTGGGAGGGGACAAGGACGGGGAGAAGTAAAGTTTCAGCCAAAAGATGTTAACG
CAGAAGCAGCTGAAAGGGAACAGGAGTGCAATGTTCGTGATACATTGAAGGCCTTCTATA
TACGATTTGTCAGGCTCACTGGAATTCTTTTCACGAGGACCAGTTTGGAAACATTTGGGG
AGCTGTTTTCTTCAGTTAGCAATGATTTGCAGATTCTTCTTTCTTCCGGTCTTGAGGAGG
ACCTTAATTTCGGTTCTGATGCTGCAGAAAATGCATTAGCTGCTGTTAGGCTTACTATCA
TCCTTATATTCACAGTGCACAATGTAAATAAAGAACCTGATAGCCAGTCATATTCTGAAC
TTGTGCAACGCAGAGTACTGCTCCAAAGTGCGTTTACGGCTGCTTTTGATTTTGTTGGAC
GAATTCTCAGAAGGTGTTCAGAACTTGGTGATATCACATCAAGCTTCTATCTGCCAGCCA
TTCTGGTCTACATCGAATGGCTGGCGTCCCATCCAGAGTTGGCTATTGACTCAGAGATGG
AGGAACAGCATGCAAATGCCAGATCTTTCTTCTGGAACCAATGTATCTCATTTATGAATA
AGTTGATCCTTACCAACCTTGCTTCTATGGAGGACAATGACGATGAGGCTTGCTTTTCTA
ATATGAGCATTTATGAGGAGGGTGAAACTGGGAACAGGCTTGCCATTTGGGAAGATCTTG
AATTGAGAGGTTTTTTGCCCTTGGTTCCTGCACATACCATTTTGGATTTCTCAAGCAAAC
ACACATTTGGAAATGTTGGAAGCACCAAGGAGAAGAAAGCACGGGTTCAACGAATTTTTG
CTGCAGGAAAGTCACTGCTGAACTTTGTTCAGATTGATCAGTTGAGGATATATTTTGATC
CATCTTTGAAAAAGTTTGTCTTGGCCAAGAACTCTCCTGTTTCTAGAACTAACACCCCTC
TTCATGAATCTCCTGATGCACTTAAAACAAATGGGACTGAAATGGATCACAAGGCTGCTA
GAAGATTTGATTCAGTTTCTTCTAATGTGGGCTCACTGCAGTCTAAAGTGCAGTTTTGTC
CTGATGGTGATGATGAAGAAGAAATTGTTTTCAAGCCAACAGCTTATGAGAAGTTTTCAA
AAGTTTCTTCAGATCTGTCAGTTAATGGATACGTCCATCCTGTACCAGTGTCTGCTGCTG
GTGGGCCAACCAATGCTAGTTTAGTGCCTGTTCAGAACACTGCATCAATGTCTGCAACTG
GTTTGCCATCCAATGGTGGGTCACTTCCAAGTACTGCATCTCTATCAGCTGCTGGTAATT
ACAACACTGATCAGTCGCTTCCCAGGTCGTCTGTTGGTTGGACTGATTGGGCTGTCAATA
GTGAGCAAAATGTTACTCCTAGCATTGCTCCAAGATTTGAACTCATGCAGTCTGTTGAGG
AGCCTGTTTCCAGCTGGACAAGCAGTGGGGCACAGCATGTTGGTCCTCAGCACAAGCACA
CAGGTTTAACTTTCCCAGATGTTGTCTCTGAACCATGTGTATCTGCATCAATGGTTCAAT
GTTTTAGTAGCTCCGATTATTCGAAATTTCTCAGAGAACAAGAAATATTCTTAATGAATG
GACTGAAGACTGTCAACATAACTGGAAATGGCTATCTAGAGCAGAGATTGCAGCCTGGAT
TGAGTGGTTTACAGTCTATGGGTTATTCATCTCAGATACCTATTCAACCTGGTGGTACCA
CTGCAAACCTGATGCATAATCATGTCAAAATTACTGGAGAGACTGTCCCCTCTACACTTG
ATTCAGTTGTACCTTCAATAGCACCATCAGGTGGCATGCCAATCAAACTTACAGAAGCAC
CACTAACTGCTTCGAAGAAGAACCCTGTTAGTCGTCCATCAAAGCCTGTTGGACCACCTC
CAGGATTTAATCATGTAACCCCAAAGCGTCAAGATGATTCTATTCCGGTTGAAAAACTGC
AGAACCCACAGGTCGATGATTACAGCTGGCTAGATAGCTATCAGCAATCGATTGATCATG
TTCACAGCTTAAGAACTATTTATCCTGGTGTCAGTGATACTAGCACTGCATTTGCCACTC
CATTCTCTTTCCCTGGGAGGATACACACACAAGGGACCAATGAAAAG