Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019789_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:7:61633462:61644384:-1 gene:Zm00001d019789 gene_biotype:protein_coding transcript_biotype:protein_coding description:homolog of histone chaperone HIRA
Sequence	ATGATTGCGGAGAAGCCAAACTGGATTCGTCACGAGGGCCTACAGATCTTCTCCATCGAC ATCCAGCCCGGCGGCCTCCGCTTCGCCACTGGCGGCGGCGACCAGAAGGTTCGAATATGG AGCATGAAATCTGTGGACAAGAATAATAATCACAATGATTCCAGCCAAGGGTTGCTAGCT ACAATGCGTGACCATTTTGGATCGGTAAACTGTGTGAGATGGGCAAGGCATGGCCGCTAT CTGGCTTCTGGATCAGATGATCAGGTTATCCTAATTCATGAGAGAAAAGCTGGTTCTGGA ACATCTGAGTTTGGTAGTGGGGAACCTCCAGATGTGGAAAATTGGAAGGTTATTATGACC TTAAGAGGGCATACTGCGGACGTGGTAGATCTTAACTGGTCCCCTGATGATTCAACATTG GCTAGTGGTAGCTTGGATAATACTGTTCACATATGGAACATAACCAATGGTATGTGCACT GCCGTCTTGAGAGGGCATTCCAGCTTGGTCAAGGGTGTTACCTGGGATCCTATTGGCTCT TTCATCGCAAGCCAATCAGATGATAAGACCGTTATAATATGGCGTACAAGTGACTGGAGT CTTGCTCACAAGACAGAAGGCCATTGGGAAAAATCTCTTGGTTCAACATTTTTTAGGCGA CTTGCGTGGTCACCTTGTGGCCACTTCATTACTACGACTCATGGCTTCCAGAAACCTAGG CATTCAGCCCCTGTGCTTGAAAGAGGCGAGTGGTCTGCTACATTTGACTTTCTAGGACAT AACGCACCTATCGTGGTGGTTAAGTTTAATAACTCAATGTTCCGTAAGAGTTTCTCCAAT GGTCAAGACACAAAAGCTGCACCAGCTGGATGGGCCAATGGGACATCAAAGATATCATCA AAAGAACAGCAACCATATAATGTTATTGCTATTGGAAGTCAGGACAGAACAATTACTGTT TGGACAACAGCGAGTGCACGGCCATTGTTCGTTGCTAAGCATTTTTTCTCTCAAAGCGTG GTTGATTTATCTTGGAGCCCTGATGGTTATTCACTTTTTGCATGCTCCTTGGATGGATCT GTTGCCAACTTCCACTTTGAAGCAAAGGAGCTTGGATACAAGTTAAGTGATTCTGATCTG GATGAATTGAAGAGGAGCAGATATGGTGATGTTAGAGGACGGCAATCAAATCTGGCTGAA AGCCCTGCACAGTTACTGCTAGAAGAAGCATCAGCAAAGCAATCGGCTAGCAAAAAAGGG ACTCCGATTGTCCAGCAATTTCAAGCACCCCAAAAACTTTCTGCAGATGTGCTTAACCCA GCTCCTGTTGTGCAAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAGAAGAAATCA TCAGATCCTGCTGCTGATGGTATGAATAAAGTTACTCGGTTATCTAGTCCAGTGAAGCAG AGAGAATACCGGCGTCCTGATGGCAGGAAAAGAATAATCCCAGAGGCTGTTGGATTTCCA TCCAACCAGGATAACATACCCAGCCGTTCTCAGAACCACGTTATAGATTTTTCATCCTTA GATCAGCGAATGAATGGGATAAGACCATCTTATTGTAGTAGCAGTAACTGTAACAACTCT GGAGTTAAGGACTGCTCTGGTGTCACAGCAAGGGCTAACATTACAGAAAGTCTTGTTATT CAAAAAGCTTCAACCAATGCTAGCAGTGATGGAAGGCTGACTGTAGAACGCACTGGATCT GTTGTTCCAGGCTCTTTGAACTGCCCTGCACTTTCTATACATGTATTAGATAAGAAAGAC AATGAGGATTCCTTGCCAGTCTGCCTTGAGGCAAATCCTGTAGAACACGCTGCAGGTGAT ATGAATGGTGTCGGTGGTGCCTTTTCAACAAAAGGAACAGAAATAAGGTGTACAAGAGGA ACAGAAACTCTTTGGTTGGATCGTATATCTGCAAAGGTTACTGCCTTGGCAGGCAATACA AATTTCTGGGCTGTTGGCTGTGAAGATGGTTACCTGCAGGTTTACACAAAATGTGGAAGA CGAGCCATGCCGGCAATGATGATGGGATCTGCAGCTGTTTTTATAGACTGTGATGACTGC TGGAAATTGCTTCTTGTCACAAGAAGAGGTTTAATGTATATATGGGACCTCCATAACAGG ACCTGCATTTTGCAGGACTCATTGGCTGCTTTGGTTGCATCTCCAGATGAGTCATCAGCA AATCATGCAGGTGCAGTAAAGGTTATATCTGCTAAATTCTCAAGATGTGGTTTTCCCTTA GTTGTCCTTGCCAGCCGTCATGCTTTTCTTTTTGACATGAGCATGAAGTGCTGGTTAAGG ATTGCTGATGATTGTTTTCCGGCATCAAATTTTGCCAGCTCATTTATTTTTCCCCAAGCT GGAGAGCTAGGCAAGTTGCAGATTGATGTAGGCAAGTTTATGGCTAGAAAGCCTATATGG AGCAGGGTTACAGATGATGGTTTGCAGACACGTGCCCATTTAGAGACCCAGTTGGCAGCT TCTTTGGCTTTGAAGTCACCACAGGAGTACCGCCAATGCCTCCTATCCTACATACGGTTT CTGGCAAGAGAAGCAGATGAATCCCGTCTACGTGAGGTTTGTGAGAGCTTCCTAGGTCCT CCCATGGGCATGCTTGGATCTGAGTCATCTACGGATCCCAAAAGTCCAGCGTGGGATTCT GATGTTCTCGGGATGAAGAAGCACCAACTCCTCAGGGAAGACATACTTCCATCGATGGCA TCTAACCGGAAAGTCCAGCGTCTGCTCAACGAGTTTATGGATCTCCTATCAGAGTATGAA GCTGCTAAGAGCAAAGTTGACCCAATGGATATCACACCGGCGCTACCACAACAAGCACCA GAAGCCAATGCCAACGTGGTCACCTCGTAG

Peptide Sequence

PEP ID	Zm00001d019789_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:7:61633462:61644384:-1 gene:Zm00001d019789 transcript:Zm00001d019789_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:homolog of histone chaperone HIRA
Sequence	MIAEKPNWIRHEGLQIFSIDIQPGGLRFATGGGDQKVRIWSMKSVDKNNNHNDSSQGLLA TMRDHFGSVNCVRWARHGRYLASGSDDQVILIHERKAGSGTSEFGSGEPPDVENWKVIMT LRGHTADVVDLNWSPDDSTLASGSLDNTVHIWNITNGMCTAVLRGHSSLVKGVTWDPIGS FIASQSDDKTVIIWRTSDWSLAHKTEGHWEKSLGSTFFRRLAWSPCGHFITTTHGFQKPR HSAPVLERGEWSATFDFLGHNAPIVVVKFNNSMFRKSFSNGQDTKAAPAGWANGTSKISS KEQQPYNVIAIGSQDRTITVWTTASARPLFVAKHFFSQSVVDLSWSPDGYSLFACSLDGS VANFHFEAKELGYKLSDSDLDELKRSRYGDVRGRQSNLAESPAQLLLEEASAKQSASKKG TPIVQQFQAPQKLSADVLNPAPVVQNQKAPEALPEDEKKSSDPAADGMNKVTRLSSPVKQ REYRRPDGRKRIIPEAVGFPSNQDNIPSRSQNHVIDFSSLDQRMNGIRPSYCSSSNCNNS GVKDCSGVTARANITESLVIQKASTNASSDGRLTVERTGSVVPGSLNCPALSIHVLDKKD NEDSLPVCLEANPVEHAAGDMNGVGGAFSTKGTEIRCTRGTETLWLDRISAKVTALAGNT NFWAVGCEDGYLQVYTKCGRRAMPAMMMGSAAVFIDCDDCWKLLLVTRRGLMYIWDLHNR TCILQDSLAALVASPDESSANHAGAVKVISAKFSRCGFPLVVLASRHAFLFDMSMKCWLR IADDCFPASNFASSFIFPQAGELGKLQIDVGKFMARKPIWSRVTDDGLQTRAHLETQLAA SLALKSPQEYRQCLLSYIRFLAREADESRLREVCESFLGPPMGMLGSESSTDPKSPAWDS DVLGMKKHQLLREDILPSMASNRKVQRLLNEFMDLLSEYEAAKSKVDPMDITPALPQQAP EANANVVTS

Transcript Sequence

Transcript ID	Zm00001d019789_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:61633462:61644384:-1 gene:Zm00001d019789 gene_biotype:protein_coding transcript_biotype:protein_coding description:homolog of histone chaperone HIRA
Sequence	AATTTTCATTCGAATTCGTTTTCGTTTTTCGTTCTTTTTTGTTTTTCCCCATTCTCACAC GAACAAGACGAACACGTTCGTCCCCATCGCCGTGTTCTTCGCGCCGCCGCTGCCCACCGA TCGAATCCGCCCGCCGCCTCCCAGGTTTGGGGCATATGGCCTCGTGGGTTTGGGAGTGTG ATCGACGGGCAGTGTAATTTAATAATTAGCTAGGATGTCAAGAGATGATCACGTTGAAAT CTAAGTCTTGAAGAGATGATTGCGGAGAAGCCAAACTGGATTCGTCACGAGGGCCTACAG ATCTTCTCCATCGACATCCAGCCCGGCGGCCTCCGCTTCGCCACTGGCGGCGGCGACCAG AAGGTTCGAATATGGAGCATGAAATCTGTGGACAAGAATAATAATCACAATGATTCCAGC CAAGGGTTGCTAGCTACAATGCGTGACCATTTTGGATCGGTAAACTGTGTGAGATGGGCA AGGCATGGCCGCTATCTGGCTTCTGGATCAGATGATCAGGTTATCCTAATTCATGAGAGA AAAGCTGGTTCTGGAACATCTGAGTTTGGTAGTGGGGAACCTCCAGATGTGGAAAATTGG AAGGTTATTATGACCTTAAGAGGGCATACTGCGGACGTGGTAGATCTTAACTGGTCCCCT GATGATTCAACATTGGCTAGTGGTAGCTTGGATAATACTGTTCACATATGGAACATAACC AATGGTATGTGCACTGCCGTCTTGAGAGGGCATTCCAGCTTGGTCAAGGGTGTTACCTGG GATCCTATTGGCTCTTTCATCGCAAGCCAATCAGATGATAAGACCGTTATAATATGGCGT ACAAGTGACTGGAGTCTTGCTCACAAGACAGAAGGCCATTGGGAAAAATCTCTTGGTTCA ACATTTTTTAGGCGACTTGCGTGGTCACCTTGTGGCCACTTCATTACTACGACTCATGGC TTCCAGAAACCTAGGCATTCAGCCCCTGTGCTTGAAAGAGGCGAGTGGTCTGCTACATTT GACTTTCTAGGACATAACGCACCTATCGTGGTGGTTAAGTTTAATAACTCAATGTTCCGT AAGAGTTTCTCCAATGGTCAAGACACAAAAGCTGCACCAGCTGGATGGGCCAATGGGACA TCAAAGATATCATCAAAAGAACAGCAACCATATAATGTTATTGCTATTGGAAGTCAGGAC AGAACAATTACTGTTTGGACAACAGCGAGTGCACGGCCATTGTTCGTTGCTAAGCATTTT TTCTCTCAAAGCGTGGTTGATTTATCTTGGAGCCCTGATGGTTATTCACTTTTTGCATGC TCCTTGGATGGATCTGTTGCCAACTTCCACTTTGAAGCAAAGGAGCTTGGATACAAGTTA AGTGATTCTGATCTGGATGAATTGAAGAGGAGCAGATATGGTGATGTTAGAGGACGGCAA TCAAATCTGGCTGAAAGCCCTGCACAGTTACTGCTAGAAGAAGCATCAGCAAAGCAATCG GCTAGCAAAAAAGGGACTCCGATTGTCCAGCAATTTCAAGCACCCCAAAAACTTTCTGCA GATGTGCTTAACCCAGCTCCTGTTGTGCAAAATCAGAAAGCTCCTGAAGCTTTACCTGAA GATGAGAAGAAATCATCAGATCCTGCTGCTGATGGTATGAATAAAGTTACTCGGTTATCT AGTCCAGTGAAGCAGAGAGAATACCGGCGTCCTGATGGCAGGAAAAGAATAATCCCAGAG GCTGTTGGATTTCCATCCAACCAGGATAACATACCCAGCCGTTCTCAGAACCACGTTATA GATTTTTCATCCTTAGATCAGCGAATGAATGGGATAAGACCATCTTATTGTAGTAGCAGT AACTGTAACAACTCTGGAGTTAAGGACTGCTCTGGTGTCACAGCAAGGGCTAACATTACA GAAAGTCTTGTTATTCAAAAAGCTTCAACCAATGCTAGCAGTGATGGAAGGCTGACTGTA GAACGCACTGGATCTGTTGTTCCAGGCTCTTTGAACTGCCCTGCACTTTCTATACATGTA TTAGATAAGAAAGACAATGAGGATTCCTTGCCAGTCTGCCTTGAGGCAAATCCTGTAGAA CACGCTGCAGGTGATATGAATGGTGTCGGTGGTGCCTTTTCAACAAAAGGAACAGAAATA AGGTGTACAAGAGGAACAGAAACTCTTTGGTTGGATCGTATATCTGCAAAGGTTACTGCC TTGGCAGGCAATACAAATTTCTGGGCTGTTGGCTGTGAAGATGGTTACCTGCAGGTTTAC ACAAAATGTGGAAGACGAGCCATGCCGGCAATGATGATGGGATCTGCAGCTGTTTTTATA GACTGTGATGACTGCTGGAAATTGCTTCTTGTCACAAGAAGAGGTTTAATGTATATATGG GACCTCCATAACAGGACCTGCATTTTGCAGGACTCATTGGCTGCTTTGGTTGCATCTCCA GATGAGTCATCAGCAAATCATGCAGGTGCAGTAAAGGTTATATCTGCTAAATTCTCAAGA TGTGGTTTTCCCTTAGTTGTCCTTGCCAGCCGTCATGCTTTTCTTTTTGACATGAGCATG AAGTGCTGGTTAAGGATTGCTGATGATTGTTTTCCGGCATCAAATTTTGCCAGCTCATTT ATTTTTCCCCAAGCTGGAGAGCTAGGCAAGTTGCAGATTGATGTAGGCAAGTTTATGGCT AGAAAGCCTATATGGAGCAGGGTTACAGATGATGGTTTGCAGACACGTGCCCATTTAGAG ACCCAGTTGGCAGCTTCTTTGGCTTTGAAGTCACCACAGGAGTACCGCCAATGCCTCCTA TCCTACATACGGTTTCTGGCAAGAGAAGCAGATGAATCCCGTCTACGTGAGGTTTGTGAG AGCTTCCTAGGTCCTCCCATGGGCATGCTTGGATCTGAGTCATCTACGGATCCCAAAAGT CCAGCGTGGGATTCTGATGTTCTCGGGATGAAGAAGCACCAACTCCTCAGGGAAGACATA CTTCCATCGATGGCATCTAACCGGAAAGTCCAGCGTCTGCTCAACGAGTTTATGGATCTC CTATCAGAGTATGAAGCTGCTAAGAGCAAAGTTGACCCAATGGATATCACACCGGCGCTA CCACAACAAGCACCAGAAGCCAATGCCAACGTGGTCACCTCGTAGCTGCACCAGTTCCGT TGATAGTTCCGTTGCTGGCGACTTACTGACCTCTCGATTGTTTAGCGAGGGAGGCGACCT CAGGCAAACATTGATATTGAACCCGTTAGCTGTAACGCTGTGTAACAGTAGAAGAAAGAA GCTGAGGTCGCCAGGTAATTTATTGTTAAACTGTAGGAGGCCGGGTAAACTCATGCCCTT CTTGTTCCAAGCTACCGTATGCAGTGGTGGCCCACTGGCCGTGTGTATTTTGGCGAAAAC CTGCGTCGTCAAAAACTGGCATTGACATCTTTTAGAGGAACAGGAACAATGAGCATTTCG GCGGTGATGATTGAGCGGG