Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019719_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:53590581:53601030:-1 gene:Zm00001d019719 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 4 mitochondrial
Sequence	ATGGCGATCAGGATGCCGGCGCTCATCTTCCGCCGCCGGGCGGCCGCCGCAGCTCCAAAG CCGATACAACAGTACCTCGCTGGTCTATCCACCGCAGTGGAGCACGTTATTCCAGAAGAT AACGGTCACATTGCCGGTGGGGAGGAGAACAAGAAGCGGTGGGTGGAGCTTCCTCCCTTC GCACCACTCGACGCCAACGCCACCGCTCGAGCTATCTCTCGGGGAGATGGTGGGGAAGGA GCATGCTCCAATGCCACGGCTATCAGGTGGGTCCGACACTGCTGCCCACACGTACCAGCG TCGCTGGTCCAGAAGCTGTTCCGCCTCCGCAAGGTGAAGAAGAATCTGGTGACTGCTGAT ACCTCTTCAACAGACAGTATTACTCTGCAACTCCGGTTGAGAAGGGTTTCAGCAAAAGAT GAACTTGTGCCTGGTGATATTCTCTTTCTACCTGTTAACATTCAAGAATCTTCTGTTACC GAGAAGACCAAGAAATTTGGTAACAAGAATGAGATTGATTTTCTACGTGACCTTGAAATC TACAAGGATAGAGCCATCATTGTGCTCAACAAACCACCTGGAATGCCAGTACAAGGTGGT GTTGGCATAAAGAATAGCATTGATATACTGGCCCCGATGTTTGAGAACGGTTCTTCTGAA GTACCTCGACTGGTCCACAGGCTTGATAGGGATTGCAGTGGCGTCCTTGTTCTGGGAAGA ACTCAATTTAGCGCTTCCCTTATGCATGCTATATTTCGTGAGAAAACTGCTGATGCTTTA GGTGATGGTACTCAACAAGTACTGCAAAGAAAATATGTTGCACTTGTTATTGGAAGACCT AGGCATCCCAAGGGTTTATTGTCAGCACCACTTGCGAAGGTTGTATTACAAGATGGCAGG TCAGAGCGTCTGACTGTTTGCGCTGGTTCAAATACTGCTTCTGTTCAAGATGCTTTGACA GAGTACCGTGTGATTGAGTCTTTTCCTCAAGGGTACACTTGGTTAGAACTATTCCCTCGA ACTGGAAGGAAGCATCAGCTCCGAGTCCATTGTGCGGAGGTTCTGGGAACACCCATCGTT GGGGATTACAAGTATGGACGCCAAGCACACCAGAACTGGATGCCTCTCCCCATGCCACAA ACAATCGACAAGGAAATGCTGAAGAAGAGGAAGCTTCCCTTTGGTCTTACTTTGGGCGGT GGAAGCGTAGCTGAGCAGCAGCCTCAGCTGCATCTACACTGCAAGCAGATGATCCTTCCT GACATCTCAGCAGCTATGCAACAGCTGCGGTCTTCAGATGCTGACCACGATTTCTCTGAT CTGGAGAAGCTGAGCTTTGTCGCGCCATTGCCATTGCACATGCAGTTAAGCTGGAAGATT TTGTTGTCCGTAGGCAAGTAG

Peptide Sequence

PEP ID	Zm00001d019719_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:53590581:53601030:-1 gene:Zm00001d019719 transcript:Zm00001d019719_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 4 mitochondrial
Sequence	MAIRMPALIFRRRAAAAAPKPIQQYLAGLSTAVEHVIPEDNGHIAGGEENKKRWVELPPF APLDANATARAISRGDGGEGACSNATAIRWVRHCCPHVPASLVQKLFRLRKVKKNLVTAD TSSTDSITLQLRLRRVSAKDELVPGDILFLPVNIQESSVTEKTKKFGNKNEIDFLRDLEI YKDRAIIVLNKPPGMPVQGGVGIKNSIDILAPMFENGSSEVPRLVHRLDRDCSGVLVLGR TQFSASLMHAIFREKTADALGDGTQQVLQRKYVALVIGRPRHPKGLLSAPLAKVVLQDGR SERLTVCAGSNTASVQDALTEYRVIESFPQGYTWLELFPRTGRKHQLRVHCAEVLGTPIV GDYKYGRQAHQNWMPLPMPQTIDKEMLKKRKLPFGLTLGGGSVAEQQPQLHLHCKQMILP DISAAMQQLRSSDADHDFSDLEKLSFVAPLPLHMQLSWKILLSVGK

Transcript Sequence

Transcript ID	Zm00001d019719_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:53590581:53601030:-1 gene:Zm00001d019719 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 4 mitochondrial
Sequence	AGAGGCTCGATGGCGATCAGGATGCCGGCGCTCATCTTCCGCCGCCGGGCGGCCGCCGCA GCTCCAAAGCCGATACAACAGTACCTCGCTGGTCTATCCACCGCAGTGGAGCACGTTATT CCAGAAGATAACGGTCACATTGCCGGTGGGGAGGAGAACAAGAAGCGGTGGGTGGAGCTT CCTCCCTTCGCACCACTCGACGCCAACGCCACCGCTCGAGCTATCTCTCGGGGAGATGGT GGGGAAGGAGCATGCTCCAATGCCACGGCTATCAGGTGGGTCCGACACTGCTGCCCACAC GTACCAGCGTCGCTGGTCCAGAAGCTGTTCCGCCTCCGCAAGGTGAAGAAGAATCTGGTG ACTGCTGATACCTCTTCAACAGACAGTATTACTCTGCAACTCCGGTTGAGAAGGGTTTCA GCAAAAGATGAACTTGTGCCTGGTGATATTCTCTTTCTACCTGTTAACATTCAAGAATCT TCTGTTACCGAGAAGACCAAGAAATTTGGTAACAAGAATGAGATTGATTTTCTACGTGAC CTTGAAATCTACAAGGATAGAGCCATCATTGTGCTCAACAAACCACCTGGAATGCCAGTA CAAGGTGGTGTTGGCATAAAGAATAGCATTGATATACTGGCCCCGATGTTTGAGAACGGT TCTTCTGAAGTACCTCGACTGGTCCACAGGCTTGATAGGGATTGCAGTGGCGTCCTTGTT CTGGGAAGAACTCAATTTAGCGCTTCCCTTATGCATGCTATATTTCGTGAGAAAACTGCT GATGCTTTAGGTGATGGTACTCAACAAGTACTGCAAAGAAAATATGTTGCACTTGTTATT GGAAGACCTAGGCATCCCAAGGGTTTATTGTCAGCACCACTTGCGAAGGTTGTATTACAA GATGGCAGGTCAGAGCGTCTGACTGTTTGCGCTGGTTCAAATACTGCTTCTGTTCAAGAT GCTTTGACAGAGTACCGTGTGATTGAGTCTTTTCCTCAAGGGTACACTTGGTTAGAACTA TTCCCTCGAACTGGAAGGAAGCATCAGCTCCGAGTCCATTGTGCGGAGGTTCTGGGAACA CCCATCGTTGGGGATTACAAGTATGGACGCCAAGCACACCAGAACTGGATGCCTCTCCCC ATGCCACAAACAATCGACAAGGAAATGCTGAAGAAGAGGAAGCTTCCCTTTGGTCTTACT TTGGGCGGTGGAAGCGTAGCTGAGCAGCAGCCTCAGCTGCATCTACACTGCAAGCAGATG ATCCTTCCTGACATCTCAGCAGCTATGCAACAGCTGCGGTCTTCAGATGCTGACCACGAT TTCTCTGATCTGGAGAAGCTGAGCTTTGTCGCGCCATTGCCATTGCACATGCAGTTAAGC TGGAAGATTTTGTTGTCCGTAGGCAAGTAGTGTTGTCATTTCTTCTTTAGGCATGCTTGC TTGCTGTGCTGTAATAACTTTATAACTGCGAGGTTTGCGTTAAGACGTCGTAGAAAGCTT AATTTGGGCTGTTGGAGCAGCGGACCTCTAATGAGGTGAAAGATGACATCACACTCAGAA ACGATGTTGATAAATAGGTTATTGTTTTTTCTTTTC