Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019700_T015
CDS Infomation

cds chromosome:B73_RefGen_v4:7:51773480:51776578:1 gene:Zm00001d019700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LONGIFOLIA 2
Sequence

ATGCCAAAGCTATATAATGGAAACCATGATGACCAAGAGATGGCCAGTGCGAACATGAGA
CTGAACCGTAACACCAACAACATGTGGATGCCTGAAGAGAGCAACGCTGAAAGCTCTTTC
AAATCGCCTATTGTGATAATGAAACCTTCAAAATCTGCAAACCTTTACAGCAAAGTGGAT
TCTTCTGTCTTCCCATTAGGAGGTTCATCTGATCTCCCACAGCCACAAACAAGCAATAGC
ACTGATAGAAGGAAAGCTTCAACGATTAATAGAACCGCCAAAGGGCAATATGCGAAATTG
AGTCCAAGGGTGCCTACTTCTCAACCCCTTGTTTCTTGTGACAGGAGATCATATGGAAGG
AATGATGATAGCAGCAACAACCAAAAATCTAGTTCACTGCTGGTCACTGAGAGCTCAACC
AGAAGACAGCAGCTGCCAAGGAATAGTAGCGTAAGTATGCAAAAGAACAAAAATTCCACT
AGCCCAAAATTACTACAGAGAAAACTTGATCCAGAGCGGAGGGCTAGACCACCTATTCCT
TCTGCTGAGTCTAACAAAAGCGAAAGGCAATCTGGAGATAGGAACAATTCAGAAACAGTG
TCACCCCGAAGCAAATTCAGAAGGAAACTTGTGCGCCCACAAGGTGATGATGGCATGCCC
ATTGGATTGAACAACAGGACAAGGAGCCTGTATCAGCATGACAATGATATGTCCATAAGG
TCAGATGGCAGTATAAGTGTTGCTTCAGAGCTGGATATTATAAGCAATGACAGATCTACA
GGAGTTAATATTTCTAACTTTGAGCAAGGCATTGGAACTCCATCTGGAAGGAACCCACAG
AAAGTGAAAACCTCATACGATGCAAATATGGACGTGCCATCTGTAGACCCTTCAGCTGCT
ATTTCGGAACGGCCCAGTCCAGTTTCTGTGTTGGACTCTTCATTTGATCAGGAGGATTTG
TTCCCTACCAGCAGGACTCCAAATTCACTTGCTGTTGGTATGATAACCTTTTTACAATAT
GATGAGCGCGAAACATTAGAGGAACCCTGGAAACCATCTGTCGCTATACAGTCCAAGAAC
AATAAACTCGCAAATGTTGCGAGCTTGCTTGAGAAGCTCCAGCAGCTTAGCGTGAACAAG
GATGAGGATGCACCTCCGGTTGACCATATTGCTTTCTTGTGTGAGACAGAGAGCCCAGAC
CACCGCTACGTGTCTGAGATACTGCTGGCCTCCGGTCTTCTGATGAAAGACCTAGGTTCA
GGACAGACAGGTCTCCAGCTCCACTCCTCTGGCTACCCGATCAACCCTGACTTGTTCCAC
GTGTTGGAGCAAAGGAAGGCTGGATGGGTCAGTACACCTGATGGCATCCATCAGAGCAGA
AGCGGCACAAAATCTGATCCCAGGAGAGCGCACCGGAAGCTGATGTTTGACACTGTGAAT
GAGCTTCTCCTTCAGAAGTTTGAGAAGGAAACCGCCGTTTATGCGCTCAGTTCCTTCACC
AGAGCGAAGGATCCACCTGCAAAGACTTTTAGCGGGCAACAGCTGCCGAAGTTCATATCT
TCGGGAATTGAAGAACTGGATATGGAGCGATCGTCCATCAGCCAGAAGGACAGCAGCGTG
ATACCTGATGCAGAGATCCTGCGGAGGCTGCAGGGATGGACGAGCTTCAGCAAGGAGCTC
CCGGGGATGGTGCTGGAGATCGAAAGGTCGATATTCAAGGAGCTGGTGGACGAGGTGGTG
CATGGGGAGTCTGCTGACGGCCCGGAGATGAAGGCTGCTGGCAGACGGAGAAGGCGGCTC
TTTGCTTGA

Peptide Sequence

PEP ID

Zm00001d019700_P015
PEP Infomation

pep chromosome:B73_RefGen_v4:7:51773480:51776578:1 gene:Zm00001d019700 transcript:Zm00001d019700_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LONGIFOLIA 2
Sequence

MPKLYNGNHDDQEMASANMRLNRNTNNMWMPEESNAESSFKSPIVIMKPSKSANLYSKVD
SSVFPLGGSSDLPQPQTSNSTDRRKASTINRTAKGQYAKLSPRVPTSQPLVSCDRRSYGR
NDDSSNNQKSSSLLVTESSTRRQQLPRNSSVSMQKNKNSTSPKLLQRKLDPERRARPPIP
SAESNKSERQSGDRNNSETVSPRSKFRRKLVRPQGDDGMPIGLNNRTRSLYQHDNDMSIR
SDGSISVASELDIISNDRSTGVNISNFEQGIGTPSGRNPQKVKTSYDANMDVPSVDPSAA
ISERPSPVSVLDSSFDQEDLFPTSRTPNSLAVGMITFLQYDERETLEEPWKPSVAIQSKN
NKLANVASLLEKLQQLSVNKDEDAPPVDHIAFLCETESPDHRYVSEILLASGLLMKDLGS
GQTGLQLHSSGYPINPDLFHVLEQRKAGWVSTPDGIHQSRSGTKSDPRRAHRKLMFDTVN
ELLLQKFEKETAVYALSSFTRAKDPPAKTFSGQQLPKFISSGIEELDMERSSISQKDSSV
IPDAEILRRLQGWTSFSKELPGMVLEIERSIFKELVDEVVHGESADGPEMKAAGRRRRRL
FA

Transcript Sequence

Transcript ID

Zm00001d019700_T015
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:51773480:51776578:1 gene:Zm00001d019700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LONGIFOLIA 2
Sequence

AAGGACTATTAGAAAATAAGAAACGGGAGGAAGCATTTATGCCAAAGCTATATAATGGAA
ACCATGATGACCAAGAGATGGCCAGTGCGAACATGAGACTGAACCGTAACACCAACAACA
TGTGGATGCCTGAAGAGAGCAACGCTGAAAGCTCTTTCAAATCGCCTATTGTGATAATGA
AACCTTCAAAATCTGCAAACCTTTACAGCAAAGTGGATTCTTCTGTCTTCCCATTAGGAG
GTTCATCTGATCTCCCACAGCCACAAACAAGCAATAGCACTGATAGAAGGAAAGCTTCAA
CGATTAATAGAACCGCCAAAGGGCAATATGCGAAATTGAGTCCAAGGGTGCCTACTTCTC
AACCCCTTGTTTCTTGTGACAGGAGATCATATGGAAGGAATGATGATAGCAGCAACAACC
AAAAATCTAGTTCACTGCTGGTCACTGAGAGCTCAACCAGAAGACAGCAGCTGCCAAGGA
ATAGTAGCGTAAGTATGCAAAAGAACAAAAATTCCACTAGCCCAAAATTACTACAGAGAA
AACTTGATCCAGAGCGGAGGGCTAGACCACCTATTCCTTCTGCTGAGTCTAACAAAAGCG
AAAGGCAATCTGGAGATAGGAACAATTCAGAAACAGTGTCACCCCGAAGCAAATTCAGAA
GGAAACTTGTGCGCCCACAAGGTGATGATGGCATGCCCATTGGATTGAACAACAGGACAA
GGAGCCTGTATCAGCATGACAATGATATGTCCATAAGGTCAGATGGCAGTATAAGTGTTG
CTTCAGAGCTGGATATTATAAGCAATGACAGATCTACAGGAGTTAATATTTCTAACTTTG
AGCAAGGCATTGGAACTCCATCTGGAAGGAACCCACAGAAAGTGAAAACCTCATACGATG
CAAATATGGACGTGCCATCTGTAGACCCTTCAGCTGCTATTTCGGAACGGCCCAGTCCAG
TTTCTGTGTTGGACTCTTCATTTGATCAGGAGGATTTGTTCCCTACCAGCAGGACTCCAA
ATTCACTTGCTGTTGGTATGATAACCTTTTTACAATATGATGAGCGCGAAACATTAGAGG
AACCCTGGAAACCATCTGTCGCTATACAGTCCAAGAACAATAAACTCGCAAATGTTGCGA
GCTTGCTTGAGAAGCTCCAGCAGCTTAGCGTGAACAAGGATGAGGATGCACCTCCGGTTG
ACCATATTGCTTTCTTGTGTGAGACAGAGAGCCCAGACCACCGCTACGTGTCTGAGATAC
TGCTGGCCTCCGGTCTTCTGATGAAAGACCTAGGTTCAGGACAGACAGGTCTCCAGCTCC
ACTCCTCTGGCTACCCGATCAACCCTGACTTGTTCCACGTGTTGGAGCAAAGGAAGGCTG
GATGGGTCAGTACACCTGATGGCATCCATCAGAGCAGAAGCGGCACAAAATCTGATCCCA
GGAGAGCGCACCGGAAGCTGATGTTTGACACTGTGAATGAGCTTCTCCTTCAGAAGTTTG
AGAAGGAAACCGCCGTTTATGCGCTCAGTTCCTTCACCAGAGCGAAGGATCCACCTGCAA
AGACTTTTAGCGGGCAACAGCTGCCGAAGTTCATATCTTCGGGAATTGAAGAACTGGATA
TGGAGCGATCGTCCATCAGCCAGAAGGACAGCAGCGTGATACCTGATGCAGAGATCCTGC
GGAGGCTGCAGGGATGGACGAGCTTCAGCAAGGAGCTCCCGGGGATGGTGCTGGAGATCG
AAAGGTCGATATTCAAGGAGCTGGTGGACGAGGTGGTGCATGGGGAGTCTGCTGACGGCC
CGGAGATGAAGGCTGCTGGCAGACGGAGAAGGCGGCTCTTTGCTTGATACGGTTTGTTTG
ACCATCGCCATCCACCATTTGGATGGGCCTGATTTGTGAAGCTGTAACTTTGTTTGTCTT
GCCATGAGAGTGAGACCCTATTTCATCTCAAGAGAAGAGG