Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019666_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:49119150:49122541:1 gene:Zm00001d019666 gene_biotype:protein_coding transcript_biotype:protein_coding description:Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
Sequence

ATGGGGAAGACACCGAAGAAGAAGAAACTAAGTGAATCGGGATCGAGAGGCAGCCCGAGA
ACCAGCAGGTGCAACTCGAGGAGCAGCCAATGCAGCGGCGAGCAGATCAGCTCGCACCCA
GCGCCAGCGGTGGACGAGGACGACGCCGTCTTCATCGGGCTGGCCTCCGAGCTGAAGGAG
GAAGGCACGAGGCTATTCCAGACCAGGGACTACGAGGGGGCGGCGTTCAAGTTCGACAAG
GCGATCAAGCTGTTGCCGCAGGGCCACAACGACGTGGCCTTCCTCCACTGCAACATCGCG
GCATGCTACATGCACATGAACCCCGAGGAGTACCACCGTGCCATCGACGAGTGCAACTCG
GCGCTGGATGCGTCGCCGGCGTACACGAAGGCGCTGCTCAAGAGGGCTCGGTGTTTCGAG
GCACTGGATAGGCTAGATCTAGCTTGTAGGGACGCGGAGAAGGCTCTGAGCCTGGAGCCG
AACAACGTGACGGCGTCGGAGCTGTACGAGAGCATCAAGGAGGTGATGCAGATGGAGGAG
GACGTGTCGTCGCTGGAGAGACAGGTTGCGTCGTCGTCGGTCCACCACGAGCCTGCTGCT
GCCATCAGTAGTCTCGCCAAGGAGAGGATACAGAGGAGGGTGTCGCGGAAATTTAGGAAC
TCAATCGTGGAGGAGGAGGTGTGGGAGATGATTCAGGGGGAGGAAGTGGACGACGATCAT
GGGAATAACGACGATGGCCAAGAGGACCATGCTGGGAGTAACGAGGATGATGGCGACAAA
GAGAGACACAGCGGCAGTAGTAATGGGAAGCATAATAATTCAGAGACGCAGGAGAAGCCC
TGCAGCCTGCTGCAGCACAGGCACGGGCACCACCCTGAAGAGAAAGAGACGAAAATCTTC
AAGAACGCCGCCGAGCAGTACAGCAAGCAGTGTGGTGCCAGTGCCACGAACGAAGCTGCA
GGGCAGCACTCTCCGGGGAGGAGGCATGGCCAAGATGAGCATGAGAAGCATCTCAACGAG
ATCCTGGTGAAAGGCATCCAGATGCCTGCTGAGAAGGGAAAGCACACGGCGACGACGACG
GCACAGAATAATCAAGCCAGCGTCGTGGAGAGGCGTAATAAGAAGCATTTTGAGGTGGGC
AGCCATAGCAGGCATACGACGACGCAGGAAAGATACGAGAGATACGCCAACGCCAGCGCC
AGCCTGCCGGGGAAGCACTCCTTACTGGACGAAAAGTACATGCCGCCAGAACGGCAAATC
ACCATCAGGACATCGAACTACGGTGGTGCTAGAGAAAAGCATCCAAAACTATACGCCGGC
AGCAGCAGCAGGGAGAACCATGAGGCTGCCAGAGAGGTGGTGAAGAAGAAGTTCAAGTTC
GTTCACGGGGACGACATAAGGATCGTCCTAATCCCCGAGAACTGCAGCCTGTTGCAGGTG
ATGGACATCGCCCGGTACAAGTACAACCCGCACCTCAAGTCGTTCCTTCTCAAGTTCATG
GACAAGGAGGGGGACCTGGTGACCATCACCTCCACCGAAGATCTGAGGTGGGTGGAGGAC
CTCTACCCGCAGGTGCCCGTCCGGCTGCACATCAAGGAGGTGAGCCCCGAGCGGGAGATC
ACCAGGGACCTGGTGATGCCCCAGCAGCTGTCCTGTCTCCCTGAGCGAGAGCCGAACCTG
AACCACTACAGCGCCCACACTACCTCCGACGAGTACGAGTGCGGGAGCTCGAGGAGGGAC
GACGAGCGGAGTCACCCTCCTTGCGCCACCGACGAGTGGATGGTGCAGTTCGCTCGCCTG
TTCAAGAACCACGCCGGCTTCGACTCCGACGCGTGCGTGGACCTCCGCGACCTCGGCATC
CGGCTCTACTACGAGGCCATGGAGGACACCATCACGAGCGAGGAGGCGCAGGAGATATTC
CAGGCGGCGGAGGCCAAGTTCCAGGAGATGGCGGCGCTGGCGCTCTTCAACTGGGGCAAC
ATCCACATGTCCCGCGCCAGGAAGCGCCTGGTTCTATCCGAGGACACCTCCAGGGAGTCC
ATACTCGCCCAGGTGAAGGCCGCGTACGAGTGGGCCTGCACCGAGTACGTCAAGGCCGGC
AGGAAGTTCGAGGACTCCATAGACGTGAAGCCCGACTTCTACGAGGGCCTCATCGCGCTC
GGGCAGCAGCAGTTCGAGCAGGCCAAGCTCTCGTGGCGCTACGCCGACACGTGCAAGGTG
GACATGGGAACCGAGGTGCTGGAGCTCTTCAACCACGCTGAAGACAACATGGAGAAGGGG
ATGGAGATGTGGGAAGGGATCGAGTATCTGCGAGTCAAAGGGCTGTCCAAGTCGAGGAAG
GGGAAGGCGGCCGCGGTGGTGGACAAGCTGGTGGCCCTCAGTGAGCAGGGAAAAGATCTG
TCGCCGGATGAAGCCTTTGAGCAGGCATCCAACATGCGCTCGCAGCTCAACATCTCGTGG
GGCACCATTCTCTACGAACGCTCCGTTGTGGAATTCAAGCTGGGGCTTTCTAGCTGGGAG
GAAAGCCTTCAGGAGGCCATTGAGAAGTTTAAGACCGGAGGCGCTTCCGTAGCGGACATC
AGCGTCATGGTGAAGAACCACTGTGTCAACGGAAACAATCAAGAAGGATTAAGCTTCAAC
ATCGATGAGATAGTGCAGGCATGGAATGAAATGTACGATGCGAAAAAGTTAAAAAACGGT
AGCTCCTCTTTCCGGCTCGAACCTATATTTCGGAGGAGGCCTTCAAAGCTGCATAATATA
CTAGAGCACATGCACTGCACGTGA

Peptide Sequence

PEP ID

Zm00001d019666_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:49119150:49122541:1 gene:Zm00001d019666 transcript:Zm00001d019666_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
Sequence

MGKTPKKKKLSESGSRGSPRTSRCNSRSSQCSGEQISSHPAPAVDEDDAVFIGLASELKE
EGTRLFQTRDYEGAAFKFDKAIKLLPQGHNDVAFLHCNIAACYMHMNPEEYHRAIDECNS
ALDASPAYTKALLKRARCFEALDRLDLACRDAEKALSLEPNNVTASELYESIKEVMQMEE
DVSSLERQVASSSVHHEPAAAISSLAKERIQRRVSRKFRNSIVEEEVWEMIQGEEVDDDH
GNNDDGQEDHAGSNEDDGDKERHSGSSNGKHNNSETQEKPCSLLQHRHGHHPEEKETKIF
KNAAEQYSKQCGASATNEAAGQHSPGRRHGQDEHEKHLNEILVKGIQMPAEKGKHTATTT
AQNNQASVVERRNKKHFEVGSHSRHTTTQERYERYANASASLPGKHSLLDEKYMPPERQI
TIRTSNYGGAREKHPKLYAGSSSRENHEAAREVVKKKFKFVHGDDIRIVLIPENCSLLQV
MDIARYKYNPHLKSFLLKFMDKEGDLVTITSTEDLRWVEDLYPQVPVRLHIKEVSPEREI
TRDLVMPQQLSCLPEREPNLNHYSAHTTSDEYECGSSRRDDERSHPPCATDEWMVQFARL
FKNHAGFDSDACVDLRDLGIRLYYEAMEDTITSEEAQEIFQAAEAKFQEMAALALFNWGN
IHMSRARKRLVLSEDTSRESILAQVKAAYEWACTEYVKAGRKFEDSIDVKPDFYEGLIAL
GQQQFEQAKLSWRYADTCKVDMGTEVLELFNHAEDNMEKGMEMWEGIEYLRVKGLSKSRK
GKAAAVVDKLVALSEQGKDLSPDEAFEQASNMRSQLNISWGTILYERSVVEFKLGLSSWE
ESLQEAIEKFKTGGASVADISVMVKNHCVNGNNQEGLSFNIDEIVQAWNEMYDAKKLKNG
SSSFRLEPIFRRRPSKLHNILEHMHCT

Transcript Sequence

Transcript ID

Zm00001d019666_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:49119150:49122541:1 gene:Zm00001d019666 gene_biotype:protein_coding transcript_biotype:protein_coding description:Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
Sequence

ATGTTTCCTCGTGCGTCTGCATCGTCAGTTTCCTCATTCCTCTTGCAGACTAGTAGCTAG
TGTTCTTCTCGAATTTGGGACGTCTCCCAAATCCCAATGATTTCCGCTTTTTTTCCCTAC
AGCGAATTCTCGATGTAGGCATGTATCGGGGAAGAGGAAGGTGTGAATCCTTGTTGCCCA
GTTTCTCTTTCCCACATCTCGATTTCTTTGTTGTTCCTGCTGCGCTCGTGTTTTTATATG
TATCTATCTACAAAGAAGAATCGAAGAGATTCAGTACGTAGATCTTGATTGATTTCTGAA
AGAAGCCACAAGAGAAAGGAGGCGCCAAAAAACAAGTGGAAGCGAATTGGAATCTGCCAG
AATATAATTACATTAGATTTGAGGGTATGGGGAAGACACCGAAGAAGAAGAAACTAAGTG
AATCGGGATCGAGAGGCAGCCCGAGAACCAGCAGGTGCAACTCGAGGAGCAGCCAATGCA
GCGGCGAGCAGATCAGCTCGCACCCAGCGCCAGCGGTGGACGAGGACGACGCCGTCTTCA
TCGGGCTGGCCTCCGAGCTGAAGGAGGAAGGCACGAGGCTATTCCAGACCAGGGACTACG
AGGGGGCGGCGTTCAAGTTCGACAAGGCGATCAAGCTGTTGCCGCAGGGCCACAACGACG
TGGCCTTCCTCCACTGCAACATCGCGGCATGCTACATGCACATGAACCCCGAGGAGTACC
ACCGTGCCATCGACGAGTGCAACTCGGCGCTGGATGCGTCGCCGGCGTACACGAAGGCGC
TGCTCAAGAGGGCTCGGTGTTTCGAGGCACTGGATAGGCTAGATCTAGCTTGTAGGGACG
CGGAGAAGGCTCTGAGCCTGGAGCCGAACAACGTGACGGCGTCGGAGCTGTACGAGAGCA
TCAAGGAGGTGATGCAGATGGAGGAGGACGTGTCGTCGCTGGAGAGACAGGTTGCGTCGT
CGTCGGTCCACCACGAGCCTGCTGCTGCCATCAGTAGTCTCGCCAAGGAGAGGATACAGA
GGAGGGTGTCGCGGAAATTTAGGAACTCAATCGTGGAGGAGGAGGTGTGGGAGATGATTC
AGGGGGAGGAAGTGGACGACGATCATGGGAATAACGACGATGGCCAAGAGGACCATGCTG
GGAGTAACGAGGATGATGGCGACAAAGAGAGACACAGCGGCAGTAGTAATGGGAAGCATA
ATAATTCAGAGACGCAGGAGAAGCCCTGCAGCCTGCTGCAGCACAGGCACGGGCACCACC
CTGAAGAGAAAGAGACGAAAATCTTCAAGAACGCCGCCGAGCAGTACAGCAAGCAGTGTG
GTGCCAGTGCCACGAACGAAGCTGCAGGGCAGCACTCTCCGGGGAGGAGGCATGGCCAAG
ATGAGCATGAGAAGCATCTCAACGAGATCCTGGTGAAAGGCATCCAGATGCCTGCTGAGA
AGGGAAAGCACACGGCGACGACGACGGCACAGAATAATCAAGCCAGCGTCGTGGAGAGGC
GTAATAAGAAGCATTTTGAGGTGGGCAGCCATAGCAGGCATACGACGACGCAGGAAAGAT
ACGAGAGATACGCCAACGCCAGCGCCAGCCTGCCGGGGAAGCACTCCTTACTGGACGAAA
AGTACATGCCGCCAGAACGGCAAATCACCATCAGGACATCGAACTACGGTGGTGCTAGAG
AAAAGCATCCAAAACTATACGCCGGCAGCAGCAGCAGGGAGAACCATGAGGCTGCCAGAG
AGGTGGTGAAGAAGAAGTTCAAGTTCGTTCACGGGGACGACATAAGGATCGTCCTAATCC
CCGAGAACTGCAGCCTGTTGCAGGTGATGGACATCGCCCGGTACAAGTACAACCCGCACC
TCAAGTCGTTCCTTCTCAAGTTCATGGACAAGGAGGGGGACCTGGTGACCATCACCTCCA
CCGAAGATCTGAGGTGGGTGGAGGACCTCTACCCGCAGGTGCCCGTCCGGCTGCACATCA
AGGAGGTGAGCCCCGAGCGGGAGATCACCAGGGACCTGGTGATGCCCCAGCAGCTGTCCT
GTCTCCCTGAGCGAGAGCCGAACCTGAACCACTACAGCGCCCACACTACCTCCGACGAGT
ACGAGTGCGGGAGCTCGAGGAGGGACGACGAGCGGAGTCACCCTCCTTGCGCCACCGACG
AGTGGATGGTGCAGTTCGCTCGCCTGTTCAAGAACCACGCCGGCTTCGACTCCGACGCGT
GCGTGGACCTCCGCGACCTCGGCATCCGGCTCTACTACGAGGCCATGGAGGACACCATCA
CGAGCGAGGAGGCGCAGGAGATATTCCAGGCGGCGGAGGCCAAGTTCCAGGAGATGGCGG
CGCTGGCGCTCTTCAACTGGGGCAACATCCACATGTCCCGCGCCAGGAAGCGCCTGGTTC
TATCCGAGGACACCTCCAGGGAGTCCATACTCGCCCAGGTGAAGGCCGCGTACGAGTGGG
CCTGCACCGAGTACGTCAAGGCCGGCAGGAAGTTCGAGGACTCCATAGACGTGAAGCCCG
ACTTCTACGAGGGCCTCATCGCGCTCGGGCAGCAGCAGTTCGAGCAGGCCAAGCTCTCGT
GGCGCTACGCCGACACGTGCAAGGTGGACATGGGAACCGAGGTGCTGGAGCTCTTCAACC
ACGCTGAAGACAACATGGAGAAGGGGATGGAGATGTGGGAAGGGATCGAGTATCTGCGAG
TCAAAGGGCTGTCCAAGTCGAGGAAGGGGAAGGCGGCCGCGGTGGTGGACAAGCTGGTGG
CCCTCAGTGAGCAGGGAAAAGATCTGTCGCCGGATGAAGCCTTTGAGCAGGCATCCAACA
TGCGCTCGCAGCTCAACATCTCGTGGGGCACCATTCTCTACGAACGCTCCGTTGTGGAAT
TCAAGCTGGGGCTTTCTAGCTGGGAGGAAAGCCTTCAGGAGGCCATTGAGAAGTTTAAGA
CCGGAGGCGCTTCCGTAGCGGACATCAGCGTCATGGTGAAGAACCACTGTGTCAACGGAA
ACAATCAAGAAGGATTAAGCTTCAACATCGATGAGATAGTGCAGGCATGGAATGAAATGT
ACGATGCGAAAAAGTTAAAAAACGGTAGCTCCTCTTTCCGGCTCGAACCTATATTTCGGA
GGAGGCCTTCAAAGCTGCATAATATACTAGAGCACATGCACTGCACGTGATCTTGTTCCA
ATTAACCATTGGACTTGGACGCTGTACACTTGGATAACAATGTTGATGCTTATTTTATTG
TCGTTATATAGGTACGGTTAATCTATTCTCTCATCT