Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019600_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:7:45977293:45983340:1 gene:Zm00001d019600 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase
Sequence	ATGGCGTCGACCTCTCCGCGCCGCTCCTCTGGCGGGGACTCAGCTTCCCCGTCCGCACCC CTCATCCCCTCGCCGCCGACCTCCCCGGCATCCGGCCCCTCCGGTGGCCCGCTAGGGCGG CTCACGAGCCTCCGCGGCGCGGCGCGGTTCATCCGCCGCACGGGGAGCCGGCGCCTGATG AGGGAGCCCTCCGTGGCGGTGCGGGAGACGGCCGCCGAGCACCTCGAGGAGCGCCAGACC GACTGGGCCTACTCGAAGCCCGTCGTCGTGCTCGACATGCTCTGGAACCTCGCCTTCGTC GCCGTCGCCGCGGCCGTACTCGCCGCATCGGTGGGCGAGCGGCCCACCGTGCCGCTCCGT GTCTGGATCGTAGGCTACGTGCTCCAGTGCCTCCTCCACGTACTCAGCGTCACCGTCGAG TACAGGCGTCGACGCAGGAACGCGGACCAGGAGGGAGCGGGTGATGAGGATTTAAAGCTC AGTATTGTGAAGCACTTGGAGTCTGCAAACACGATGTTTTCCTTCATATGGTGGATTGTT GGGTTCTATTGGGTGTCTGCAGGTGGTAAAGCTTTATCACATGATGCTCCTCAGCTTTAT TGGCTGTCAATTGTTTTTCTGGCGTTTGATGTTTTCTTTGTGGTCTTCTGTGTTGCCTTG GCTTGTGTGATTGGAATCGCTGTTTGTTGCTGCCTTCCCTGCATTATTGCTATCTTATAT GCTGTAACTGATCAGCAGGAGGGAGCATCTGAAGATGACATAAACAACCTATCCAAATTC AAATTTCAGACAATGAGTGATGCAGACAAGCTAGCTGCTGGCATTGCAGCACCTGTGGGT GGAGTGATGACAGAGTGTGGTACCAATCCTCCTGTCGAACATATTCTCTCAGCTGAGGAT GCAGAGTGCTGTATCTGCCTATGCCCGTATGAAGATGGCGTGGAACTACGTGAGCTTCCT TGCAACCACCATTTTCACTGCAGCTGCATTGACAAGTGGCTTCACATAAATGCTACATGC CCATTGTGCAAGTTCGACATCATCAAGAGCAACCGTGACATAGAAGAGGTCTAG

Peptide Sequence

PEP ID	Zm00001d019600_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:7:45977293:45983340:1 gene:Zm00001d019600 transcript:Zm00001d019600_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase
Sequence	MASTSPRRSSGGDSASPSAPLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLM REPSVAVRETAAEHLEERQTDWAYSKPVVVLDMLWNLAFVAVAAAVLAASVGERPTVPLR VWIVGYVLQCLLHVLSVTVEYRRRRRNADQEGAGDEDLKLSIVKHLESANTMFSFIWWIV GFYWVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAILY AVTDQQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPVEHILSAED AECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDIIKSNRDIEEV

Transcript Sequence

Transcript ID	Zm00001d019600_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:45977293:45983340:1 gene:Zm00001d019600 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase
Sequence	CAGAAACAGTAAGGGTTTGACTGTTTGGCTAACGTCATGGCGTCGACCTCTCCGCGCCGC TCCTCTGGCGGGGACTCAGCTTCCCCGTCCGCACCCCTCATCCCCTCGCCGCCGACCTCC CCGGCATCCGGCCCCTCCGGTGGCCCGCTAGGGCGGCTCACGAGCCTCCGCGGCGCGGCG CGGTTCATCCGCCGCACGGGGAGCCGGCGCCTGATGAGGGAGCCCTCCGTGGCGGTGCGG GAGACGGCCGCCGAGCACCTCGAGGAGCGCCAGACCGACTGGGCCTACTCGAAGCCCGTC GTCGTGCTCGACATGCTCTGGAACCTCGCCTTCGTCGCCGTCGCCGCGGCCGTACTCGCC GCATCGGTGGGCGAGCGGCCCACCGTGCCGCTCCGTGTCTGGATCGTAGGCTACGTGCTC CAGTGCCTCCTCCACGTACTCAGCGTCACCGTCGAGTACAGGCGTCGACGCAGGAACGCG GACCAGGAGGGAGCGGGTGATGAGGATTTAAAGCTCAGTATTGTGAAGCACTTGGAGTCT GCAAACACGATGTTTTCCTTCATATGGTGGATTGTTGGGTTCTATTGGGTGTCTGCAGGT GGTAAAGCTTTATCACATGATGCTCCTCAGCTTTATTGGCTGTCAATTGTTTTTCTGGCG TTTGATGTTTTCTTTGTGGTCTTCTGTGTTGCCTTGGCTTGTGTGATTGGAATCGCTGTT TGTTGCTGCCTTCCCTGCATTATTGCTATCTTATATGCTGTAACTGATCAGCAGGAGGGA GCATCTGAAGATGACATAAACAACCTATCCAAATTCAAATTTCAGACAATGAGTGATGCA GACAAGCTAGCTGCTGGCATTGCAGCACCTGTGGGTGGAGTGATGACAGAGTGTGGTACC AATCCTCCTGTCGAACATATTCTCTCAGCTGAGGATGCAGAGTGCTGTATCTGCCTATGC CCGTATGAAGATGGCGTGGAACTACGTGAGCTTCCTTGCAACCACCATTTTCACTGCAGC TGCATTGACAAGTGGCTTCACATAAATGCTACATGCCCATTGTGCAAGTTCGACATCATC AAGAGCAACCGTGACATAGAAGAGGTCTAGGTCACTAAGGAAAAAACGCCGCAAAACTTT TCGTCATGTCTCTGCTGTGTTCTTCAGTACTACCGCTACCACATTTGCGATCCTGAGTTG TGATTACCGGTCCTTTAGGTGATGCACAAATGGTACTCGTGAATATTCTTTTTATTAGCA GTTTTCTGCAGGGCCTGTACATTCTCTTTCTGCTCGATCCGATTGCATTGCAGATTGATT TGTAAATGAGTACATGGTCACGTTGAACCTTGAAAGCAGTCAATCATTT