Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019589_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:44979369:44980975:1 gene:Zm00001d019589 gene_biotype:protein_coding transcript_biotype:protein_coding description:CAAX amino terminal protease family protein

Sequence

ATGCTCCTACATGCGTCATCCGCTGCTTACCATCCGCTTTTCCTCGTCCCCGCCAGAACC
GGAGACCGAGGAGGAGCCCCTCCTCGATTGCACGCCGCCAAACTCCAAACCCTCAACGGG
CTACAGCTACGCTCTTCCTTCTCCGCTCTCAGCTGCTCCTGCTCTCCCTCTCCTTCTCCC
GGCGATGGTGGGAAACGCAGCGCCCGCAGCCTGTTCGATGAGCTTTCCGTTCTTTCTCCA
GTCGTTCCATGGGAGGTGGATGATATATGGAGAATATATGCAGGTTATTTCTTCATCTTG
CATATCCCCCTGAGCTTTGGAGGGCTTGGTGTGATTGCCAAAGTAATGCAGCGCTCGTCA
CTTGACTCGATGACAACGGTAATTTCTACACTCATGCTTCAGTTAGCAGAGCTTGTTTTG
ACCTTAGTGCTACTCCAGTATTCTGCAAAGCCAGGGCAAGCTATCCAACCTTTCTTTTGT
GGGAAGGTTTTTACAGAACGGAATTGGGTCAAAGAGACTGTATTAGGCTTTGTAGTTTTG
ATAACCCTGGTATTGACCACATCCATCTTAGCTGACAAATTGGTAGGGTCTGAGGGCTGG
CTTACTGTCGAACTGGAACTTTAG

Peptide Sequence

PEP ID

Zm00001d019589_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:44979369:44980975:1 gene:Zm00001d019589 transcript:Zm00001d019589_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CAAX amino terminal protease family protein

Sequence

MLLHASSAAYHPLFLVPARTGDRGGAPPRLHAAKLQTLNGLQLRSSFSALSCSCSPSPSP
GDGGKRSARSLFDELSVLSPVVPWEVDDIWRIYAGYFFILHIPLSFGGLGVIAKVMQRSS
LDSMTTVISTLMLQLAELVLTLVLLQYSAKPGQAIQPFFCGKVFTERNWVKETVLGFVVL
ITLVLTTSILADKLVGSEGWLTVELEL

Transcript Sequence

Transcript ID

Zm00001d019589_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:44979369:44980975:1 gene:Zm00001d019589 gene_biotype:protein_coding transcript_biotype:protein_coding description:CAAX amino terminal protease family protein

Sequence

GGCGCTCGGCGACTGACGTCCGAGCCTCCGTGATCCTGATTTTCTATCTCCGTACCTCGT
GGCGGAATGCTCCTACATGCGTCATCCGCTGCTTACCATCCGCTTTTCCTCGTCCCCGCC
AGAACCGGAGACCGAGGAGGAGCCCCTCCTCGATTGCACGCCGCCAAACTCCAAACCCTC
AACGGGCTACAGCTACGCTCTTCCTTCTCCGCTCTCAGCTGCTCCTGCTCTCCCTCTCCT
TCTCCCGGCGATGGTGGGAAACGCAGCGCCCGCAGCCTGTTCGATGAGCTTTCCGTTCTT
TCTCCAGTCGTTCCATGGGAGGTGGATGATATATGGAGAATATATGCAGGTTATTTCTTC
ATCTTGCATATCCCCCTGAGCTTTGGAGGGCTTGGTGTGATTGCCAAAGTAATGCAGCGC
TCGTCACTTGACTCGATGACAACGGTAATTTCTACACTCATGCTTCAGTTAGCAGAGCTT
GTTTTGACCTTAGTGCTACTCCAGTATTCTGCAAAGCCAGGGCAAGCTATCCAACCTTTC
TTTTGTGGGAAGGTTTTTACAGAACGGAATTGGGTCAAAGAGACTGTATTAGGCTTTGTA
GTTTTGATAACCCTGGTATTGACCACATCCATCTTAGCTGACAAATTGGTAGGGTCTGAG
GGCTGGCTTACTGTCGAACTGGAACTTTAG