Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019552_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:7:42052619:42055686:-1 gene:Zm00001d019552 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-galactosidase

Sequence

ATGGCGCCCGAGATTCAGAGCCTGTGTCCGACTGATGCGCTCGTCGCCATCGGACTTGCA
AAGGCTGGCTACACGTATGTCAACTTAGATGACTGCTGGGCGGATTCCGAGAGAACCAAA
GAGGGATACATGGTCGCTAACCCCAAGACATTCCCATCCGGAATCAAGGCCCTGGCAGAT
TACGTTCACAGCAAGGGGCTTAAGCTTGGCATCTACTCTTCCGCTGGGACAAGAACTTGC
AGCAACAGGATGCCTGGATCTCTGGGCTACGAGGAGAGGGATGCTAAGATGTTTGCGTCA
TGGGGCGTTGACTACCTGAAGTATGACAACTGCTACAGAGACGGCACGCCTGAAACCGTG
AGGTTTGGGCGCATGTCCCGAGCGCTGGTGAACTCTGGCCGCCCAATCTTCTACTCGCTT
TGCGAATGGGGCTTCATGGAAGTTCCCAAATGGGGCGGCATGTACGGCAACAGCTGGAGG
ACCACCGGCGACATCAACGACACATGGTCAGGCATGCTGGACAACATCGACCTGAACGAC
GCCTACGCCCGGTACGCCAAGCCCGGCGGCTGGAACGACCCTGACATGCTGGAGGTCGGG
AACGGAGGCATGGCGTACAACGAGTACGTCGTGCACTTCAGCCTCTGGGCCATCGCCAAG
GCTCCCCTGGTCATCGGCTGCGACGTGACGAGAGTCTCCAATGAGACGCTCGGAATCCTC
TCCAACGCGGAGGTCATCGCGATCAGCCAAGATCGGCTGGGTGTCCAAGGACAGAAAGTG
AGCAAGTACGGCAACGATCTCGAGGTATGGGCAGGGCAGCTCTCGGGGCACAGGAAGGCG
GTGCTGCTGCTCAACCGGGGGGCCACGCGCTCCGCGTCCATCACCGCGGCATGGCCGGAC
GTGGGCATCCGCCGCGGCGTGGCCGTGGAGGCGAGGGACGTCTGGAAGCACGAGACGCTA
CCGGGCTGGTTCACCGGCAGCCTCACGGCGGTGGTCGGGCCGCACTCGTGCAAGCTCTTC
GTCCTCACGCCCGTTCCTAGCTGA

Peptide Sequence

PEP ID

Zm00001d019552_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:7:42052619:42055686:-1 gene:Zm00001d019552 transcript:Zm00001d019552_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-galactosidase

Sequence

MAPEIQSLCPTDALVAIGLAKAGYTYVNLDDCWADSERTKEGYMVANPKTFPSGIKALAD
YVHSKGLKLGIYSSAGTRTCSNRMPGSLGYEERDAKMFASWGVDYLKYDNCYRDGTPETV
RFGRMSRALVNSGRPIFYSLCEWGFMEVPKWGGMYGNSWRTTGDINDTWSGMLDNIDLND
AYARYAKPGGWNDPDMLEVGNGGMAYNEYVVHFSLWAIAKAPLVIGCDVTRVSNETLGIL
SNAEVIAISQDRLGVQGQKVSKYGNDLEVWAGQLSGHRKAVLLLNRGATRSASITAAWPD
VGIRRGVAVEARDVWKHETLPGWFTGSLTAVVGPHSCKLFVLTPVPS

Transcript Sequence

Transcript ID

Zm00001d019552_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:42052619:42055686:-1 gene:Zm00001d019552 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-galactosidase

Sequence

ACAGAGTACGCAGGCAGGACGCGACGCAGCGCCGAAGCAACAAGGATGGCGCCCGAGATT
CAGAGCCTGTGTCCGACTGATGCGCTCGTCGCCATCGGACTTGCAAAGGCTGGCTACACG
TATGTCAACTTAGATGACTGCTGGGCGGATTCCGAGAGAACCAAAGAGGGATACATGGTC
GCTAACCCCAAGACATTCCCATCCGGAATCAAGGCCCTGGCAGATTACGTTCACAGCAAG
GGGCTTAAGCTTGGCATCTACTCTTCCGCTGGGACAAGAACTTGCAGCAACAGGATGCCT
GGATCTCTGGGCTACGAGGAGAGGGATGCTAAGATGTTTGCGTCATGGGGCGTTGACTAC
CTGAAGTATGACAACTGCTACAGAGACGGCACGCCTGAAACCGTGAGGTTTGGGCGCATG
TCCCGAGCGCTGGTGAACTCTGGCCGCCCAATCTTCTACTCGCTTTGCGAATGGGGCTTC
ATGGAAGTTCCCAAATGGGGCGGCATGTACGGCAACAGCTGGAGGACCACCGGCGACATC
AACGACACATGGTCAGGCATGCTGGACAACATCGACCTGAACGACGCCTACGCCCGGTAC
GCCAAGCCCGGCGGCTGGAACGACCCTGACATGCTGGAGGTCGGGAACGGAGGCATGGCG
TACAACGAGTACGTCGTGCACTTCAGCCTCTGGGCCATCGCCAAGGCTCCCCTGGTCATC
GGCTGCGACGTGACGAGAGTCTCCAATGAGACGCTCGGAATCCTCTCCAACGCGGAGGTC
ATCGCGATCAGCCAAGATCGGCTGGGTGTCCAAGGACAGAAAGTGAGCAAGTACGGCAAC
GATCTCGAGGTATGGGCAGGGCAGCTCTCGGGGCACAGGAAGGCGGTGCTGCTGCTCAAC
CGGGGGGCCACGCGCTCCGCGTCCATCACCGCGGCATGGCCGGACGTGGGCATCCGCCGC
GGCGTGGCCGTGGAGGCGAGGGACGTCTGGAAGCACGAGACGCTACCGGGCTGGTTCACC
GGCAGCCTCACGGCGGTGGTCGGGCCGCACTCGTGCAAGCTCTTCGTCCTCACGCCCGTT
CCTAGCTGACGGCGCCGCTGGAGATCTGTCCATCCAATATCTGCCCGTGGATCCAGCTAG
AGTTATTAATTGTATGATTTCAGATACTGTAACTGCCTTGTGACTGCTCCGACAACAAGA
GCTCATCACCATCTGTCTAATGATTTGACATGGT