Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019507_T044
CDS Infomation

cds chromosome:B73_RefGen_v4:7:38302843:38305805:-1 gene:Zm00001d019507 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cellulose synthase7 description:Cellulose synthase-7

Sequence

ATGCTAACGTTTGAAGCATTATCTGAAACATCTGAATTTGCAAAGAAATGGGTTCCTTTC
TGCAAACGGTACAATATTGAACCTCGCGCTCCAGAGTGGTACTTCCAACAGAAGATAGAC
TACTTGAAAGACAAGGTGGCAGCAAACTTTGTTAGGGAGAGGAGAGCAATGAAGAGAGAG
TATGAGGAATTCAAGGTGAGAATCAATGCCTTAGTTGCCAAAGCCCAGAAAGTTCCTGAA
GAAGGATGGACAATGCAAGATGGAACCCCCTGGCCTGGAAACAATGTTCGTGATCATCCT
GGAATGATTCAGGTCTTCCTTGGCCAAAGCGGAGGCCTTGACTGTGAGGGAAATGAACTG
CCACGATTGGTTTATGTTTCTAGAGAGAAACGACCAGGCTATAACCATCATAAGAAAGCT
GGTGCTATGAATGCATTGGTCCGAGTCTCTGCTGTACTAACAAATGCTCCATATTTGTTA
AACTTGGATTGTGATCACTACATCAACAACAGCAAGGCTATAAAGGAAGCAATGTGTTTT
ATGATGGACCCTTTACTAGGAAAGAAGGTTTGCTATGTACAGTTCCCTCAAAGATTTGAT
GGGATTGATCGCCATGACCGATATGCTAACCGGAATGTTGTCTTTTTTGATATCAACATG
AAAGGTTTGGATGGTATTCAGGGTCCAATTTATGTTGGTACTGGATGTGTATTTAGAAGG
CAGGCATTATATGGTTATGATGCCCCCAAAACAAAGAAGCCACCATCAAGGACTTGCAAC
TGCTGGCCCAAGTGGTGCTTTTGCTGTTGCTGCTTTGGCAATAGGAAGCAAAAGAAGACT
ACCAAACCCAAAACAGAGAAGAAAAAGTTATTATTTTTCAAGAAAGAAGAGAACCAATCC
CCTGCATATGCTCTTGGTGAAATTGACGAAGCTGCTCCAGGAGCTGAGAATGAAAAGGCC
GGTATTGTAAATCAACAAAAATTAGAAAAGAAATTTGGCCAATCTTCTGTTTTTGTTACA
TCCACACTTCTCGAGAATGGTGGAACCTTGAAGAGTGCAAGTCCTGCTTCTCTTTTGAAA
GAAGCTATACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAGATT
GGCTGGATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGATGCATTGTCAT
GGTTGGCGGTCAATTTACTGCATACCTAAACGGGTTGCATTCAAAGGTTCTGCACCTCTG
AATCTTTCAGATCGTCTTCACCAGGTGCTTCGGTGGGCTCTTGGGTCTATTGAGATCTTC
TTCAGCAATCATTGCCCTCTTTGGTATGGGTATGGTGGCGGTCTGAAATTTTTGGAAAGA
TTTTCCTACATCAACTCCATCGTGTATCCTTGGACATCTATTCCCCTCTTGGCTTACTGT
ACATTGCCTGCCATCTGTTTATTGACAGGGAAATTTATCACTCCAGAGCTGAATAATGTT
GCCAGCCTGTGGTTCATGTCACTTTTTATCTGCATTTTTGCTACGAGCATCCTAGAAATG
AGATGGAGTGGTGTTGGAATTGATGACTGGTGGAGGAATGAGCAGTTCTGGGTCATTGGA
GGTGTGTCCTCACACCTCTTTGCTGTGTTCCAGGGACTTCTCAAGGTCATAGCTGGTGTT
GATACAAGCTTCACCGTGACATCAAAGGGTGGAGATGATGAGGAGTTCTCAGAGCTATAT
ACATTCAAATGGACTACCTTATTGATACCTCCTACCACCTTGCTTCTATTGAACTTCATT
GGTGTGGTCGCTGGCGTTTCAAATGCGATCAATAACGGATATGAGTCATGGGGCCCCCTC
TTTGGGAAGCTATTCTTTGCATTTTGGGTGATTGTCCATCTTTATCCCTTTCTCAAAGGT
TTGGTTGGAAGGCAAAACAGGACACCAACGATTGTCATCGTCTGGTCCATTCTGCTGGCT
TCAATCTTCTCGCTCCTTTGGGTTCGGATTGATCCTTTCCTTGCGAAGGATGATGGTCCG
CTTCTTGAGGAGTGTGGTTTGGATTGCAACTAG

Peptide Sequence

PEP ID

Zm00001d019507_P044
PEP Infomation

pep chromosome:B73_RefGen_v4:7:38302843:38305805:-1 gene:Zm00001d019507 transcript:Zm00001d019507_T044 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cellulose synthase7 description:Cellulose synthase-7

Sequence

MLTFEALSETSEFAKKWVPFCKRYNIEPRAPEWYFQQKIDYLKDKVAANFVRERRAMKRE
YEEFKVRINALVAKAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGGLDCEGNEL
PRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPYLLNLDCDHYINNSKAIKEAMCF
MMDPLLGKKVCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPIYVGTGCVFRR
QALYGYDAPKTKKPPSRTCNCWPKWCFCCCCFGNRKQKKTTKPKTEKKKLLFFKKEENQS
PAYALGEIDEAAPGAENEKAGIVNQQKLEKKFGQSSVFVTSTLLENGGTLKSASPASLLK
EAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRVAFKGSAPL
NLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKFLERFSYINSIVYPWTSIPLLAYC
TLPAICLLTGKFITPELNNVASLWFMSLFICIFATSILEMRWSGVGIDDWWRNEQFWVIG
GVSSHLFAVFQGLLKVIAGVDTSFTVTSKGGDDEEFSELYTFKWTTLLIPPTTLLLLNFI
GVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLA
SIFSLLWVRIDPFLAKDDGPLLEECGLDCN

Transcript Sequence

Transcript ID

Zm00001d019507_T044
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:38302843:38305805:-1 gene:Zm00001d019507 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cellulose synthase7 description:Cellulose synthase-7

Sequence

AGGTTCGACAAGGAAGGCCAGCCATCTCAACTTGCTCCAATTGATTTCTTTGTCAGTACG
GTTGATCCCTTAAAGGAACCTCCTTTGGTCACAACAAATACTGTTCTATCTATCCTTTCG
GTGGATTATCCTGTTGATAAGGTTTCTTGCTATGTTTCTGATGATGGTGCTGCAATGCTA
ACGTTTGAAGCATTATCTGAAACATCTGAATTTGCAAAGAAATGGGTTCCTTTCTGCAAA
CGGTACAATATTGAACCTCGCGCTCCAGAGTGGTACTTCCAACAGAAGATAGACTACTTG
AAAGACAAGGTGGCAGCAAACTTTGTTAGGGAGAGGAGAGCAATGAAGAGAGAGTATGAG
GAATTCAAGGTGAGAATCAATGCCTTAGTTGCCAAAGCCCAGAAAGTTCCTGAAGAAGGA
TGGACAATGCAAGATGGAACCCCCTGGCCTGGAAACAATGTTCGTGATCATCCTGGAATG
ATTCAGGTCTTCCTTGGCCAAAGCGGAGGCCTTGACTGTGAGGGAAATGAACTGCCACGA
TTGGTTTATGTTTCTAGAGAGAAACGACCAGGCTATAACCATCATAAGAAAGCTGGTGCT
ATGAATGCATTGGTCCGAGTCTCTGCTGTACTAACAAATGCTCCATATTTGTTAAACTTG
GATTGTGATCACTACATCAACAACAGCAAGGCTATAAAGGAAGCAATGTGTTTTATGATG
GACCCTTTACTAGGAAAGAAGGTTTGCTATGTACAGTTCCCTCAAAGATTTGATGGGATT
GATCGCCATGACCGATATGCTAACCGGAATGTTGTCTTTTTTGATATCAACATGAAAGGT
TTGGATGGTATTCAGGGTCCAATTTATGTTGGTACTGGATGTGTATTTAGAAGGCAGGCA
TTATATGGTTATGATGCCCCCAAAACAAAGAAGCCACCATCAAGGACTTGCAACTGCTGG
CCCAAGTGGTGCTTTTGCTGTTGCTGCTTTGGCAATAGGAAGCAAAAGAAGACTACCAAA
CCCAAAACAGAGAAGAAAAAGTTATTATTTTTCAAGAAAGAAGAGAACCAATCCCCTGCA
TATGCTCTTGGTGAAATTGACGAAGCTGCTCCAGGAGCTGAGAATGAAAAGGCCGGTATT
GTAAATCAACAAAAATTAGAAAAGAAATTTGGCCAATCTTCTGTTTTTGTTACATCCACA
CTTCTCGAGAATGGTGGAACCTTGAAGAGTGCAAGTCCTGCTTCTCTTTTGAAAGAAGCT
ATACATGTCATTAGTTGTGGTTATGAAGACAAGACAGACTGGGGAAAAGAGATTGGCTGG
ATCTATGGATCAGTTACAGAAGATATTCTAACTGGTTTCAAGATGCATTGTCATGGTTGG
CGGTCAATTTACTGCATACCTAAACGGGTTGCATTCAAAGGTTCTGCACCTCTGAATCTT
TCAGATCGTCTTCACCAGGTGCTTCGGTGGGCTCTTGGGTCTATTGAGATCTTCTTCAGC
AATCATTGCCCTCTTTGGTATGGGTATGGTGGCGGTCTGAAATTTTTGGAAAGATTTTCC
TACATCAACTCCATCGTGTATCCTTGGACATCTATTCCCCTCTTGGCTTACTGTACATTG
CCTGCCATCTGTTTATTGACAGGGAAATTTATCACTCCAGAGCTGAATAATGTTGCCAGC
CTGTGGTTCATGTCACTTTTTATCTGCATTTTTGCTACGAGCATCCTAGAAATGAGATGG
AGTGGTGTTGGAATTGATGACTGGTGGAGGAATGAGCAGTTCTGGGTCATTGGAGGTGTG
TCCTCACACCTCTTTGCTGTGTTCCAGGGACTTCTCAAGGTCATAGCTGGTGTTGATACA
AGCTTCACCGTGACATCAAAGGGTGGAGATGATGAGGAGTTCTCAGAGCTATATACATTC
AAATGGACTACCTTATTGATACCTCCTACCACCTTGCTTCTATTGAACTTCATTGGTGTG
GTCGCTGGCGTTTCAAATGCGATCAATAACGGATATGAGTCATGGGGCCCCCTCTTTGGG
AAGCTATTCTTTGCATTTTGGGTGATTGTCCATCTTTATCCCTTTCTCAAAGGTTTGGTT
GGAAGGCAAAACAGGACACCAACGATTGTCATCGTCTGGTCCATTCTGCTGGCTTCAATC
TTCTCGCTCCTTTGGGTTCGGATTGATCCTTTCCTTGCGAAGGATGATGGTCCGCTTCTT
GAGGAGTGTGGTTTGGATTGCAACTAGGATGTCAGTGCATCAGCTCCCCCAATCTGCATA
TGCTTGAAGTATATTTTCTGGTGTTTGTCCCCATATT