Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019467_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:7:35258316:35261869:-1 gene:Zm00001d019467 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spermidine synthase 2
Sequence	ATGATTACTCACCTGCCCCTTTGCTCCATCAAAGACCCCAAGAAGGTGTTGGTTATTGGA GGGGGGGATGGTGGTGTTTTGCGTGAGGTTTCACGGCATATCTCTGTGGAGCAGATTGAC ATCTGTGAAATTGATAAGATGGTGGTAGATGTCTCCAAGCAATTTTTCCCTCATCTAGCT GTTGGATTTGAAGACCCTCGTGTGTCATTACACATTGGAGATGGGGTTGCCTTCTTGAAA AATGCTCCAGAGGGTACATATGATGCAGTAATTGTGGATTCTTCTGATCCGATAGGTCCT GCTCAGGAGCTTTTTGAGAAGCCTTTCTTCCAGTCGGTGGCCAGAGCTTTGCGTCCAGGT GGAGTTGTATGCACCCAGGCAGAGAGCATATGGCTACATATGCACATCATTGAAGATATT TTCGTCAATTGCCGCCAAGTTTTCAAAGGCTCAGTTAACTATGCTTGGACAACAGTACCT ACATACCCTAGCGGAGTTATTGGGTTCATGCTTTGCTCCACCGAAGGGCCTGCTGTTGAT TTCCAGCACCCTGTTTTCAACATCGAGGAGGATGAACATTCTACGAAATCAAAAGGACCC CTTAAGTTCTACAACTCGGAGATCCACACGGCATCATTCTGTTTGCCCTCTTTTGCAAAG AGGGTAATTGAGTCAAAGGCAAGCTAG

Peptide Sequence

PEP ID	Zm00001d019467_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:7:35258316:35261869:-1 gene:Zm00001d019467 transcript:Zm00001d019467_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spermidine synthase 2
Sequence	MITHLPLCSIKDPKKVLVIGGGDGGVLREVSRHISVEQIDICEIDKMVVDVSKQFFPHLA VGFEDPRVSLHIGDGVAFLKNAPEGTYDAVIVDSSDPIGPAQELFEKPFFQSVARALRPG GVVCTQAESIWLHMHIIEDIFVNCRQVFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPAVD FQHPVFNIEEDEHSTKSKGPLKFYNSEIHTASFCLPSFAKRVIESKAS

Transcript Sequence

Transcript ID	Zm00001d019467_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:35258316:35261869:-1 gene:Zm00001d019467 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spermidine synthase 2
Sequence	AAGGCCGCGGCTGCGAGCGCTGCTTCCCACCTCCCAACTCCAGAAGTCCTCCCTAGACGC CGCCAGCCGCGCGCACACCCACCCCTCGCGCGCTCAGGGTTTCACGATGGAGGCCGAGGC GGCGGCCAAGAGGGCGCGGGAGGGCGGGGAGGACGCCACCGCGCCGGCGGGAATCTCCGC CGTCATCCCAGGATGGTTCTCCGAGATCAGCCCCATGTGGCCCGGTGAGGCGCACTCCTT GAAGGTGGAGAAGGTTCTGTTCCAGGGCAAGTCAGACTACCAAAATGTGATGGTTTTTCA GGTAAATTGTTATTGCCTTTTGCTTGCACCCAAGCCACTTCGCAATTCTTCGGTGGGACA TGATCCTGTTGCCTTTCTGTTTTGCGTTATAGTCCTCCACGTACGGGAAGGTGCTTGTCC TCGACGGAGTTATTCAGGTGACAGAGAGGGATGAGTGCGCGTACCAAGAGATGATTACTC ACCTGCCCCTTTGCTCCATCAAAGACCCCAAGAAGGTGTTGGTTATTGGAGGGGGGGATG GTGGTGTTTTGCGTGAGGTTTCACGGCATATCTCTGTGGAGCAGATTGACATCTGTGAAA TTGATAAGATGGTGGTAGATGTCTCCAAGCAATTTTTCCCTCATCTAGCTGTTGGATTTG AAGACCCTCGTGTGTCATTACACATTGGAGATGGGGTTGCCTTCTTGAAAAATGCTCCAG AGGGTACATATGATGCAGTAATTGTGGATTCTTCTGATCCGATAGGTCCTGCTCAGGAGC TTTTTGAGAAGCCTTTCTTCCAGTCGGTGGCCAGAGCTTTGCGTCCAGGTGGAGTTGTAT GCACCCAGGCAGAGAGCATATGGCTACATATGCACATCATTGAAGATATTTTCGTCAATT GCCGCCAAGTTTTCAAAGGCTCAGTTAACTATGCTTGGACAACAGTACCTACATACCCTA GCGGAGTTATTGGGTTCATGCTTTGCTCCACCGAAGGGCCTGCTGTTGATTTCCAGCACC CTGTTTTCAACATCGAGGAGGATGAACATTCTACGAAATCAAAAGGACCCCTTAAGTTCT ACAACTCGGAGATCCACACGGCATCATTCTGTTTGCCCTCTTTTGCAAAGAGGGTAATTG AGTCAAAGGCAAGCTAGACGTGAGGATACTTCACCAAG