Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019449_T014
CDS Infomation

cds chromosome:B73_RefGen_v4:7:34338635:34346907:1 gene:Zm00001d019449 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-box ATP-dependent RNA helicase 5
Sequence

ATGAAAGACCTTATTGAAATGGGTGTTTGCTGTCTTAATGAGGTTTCGTTTGTGGTTCTA
GATGAAGCAGATAGGATGCTGGATTTGGGTTTTGAACCTGAAGTCAGGGCAATTTTGAGC
CAAACATCATCTGTACGCCAGATGGTTATGTTCAGTGCAACATGGCCTCTTGCTGTCCAC
AAATTAGCCCAGGAGTTTATGGATCCAAATCCGATAAAGGTTGTTATTGGATCAGAAGAC
CTTGCTGCTAACCATGACGTGATGCAAATTGTTGAAGTATTGGATGATAGAACAAGGGAT
TCAAGATTACTTGCCTTGCTTGACAAATACCATCAAGCACAAAGCAACAGGGTTTTGGTT
TTTGTGCTGTACAAGAAAGAAGCTGCACGAGTGGAAACAATGCTTCAGAGAAGGGGATGG
AAGGCTGTTTCAGTCCATGGCGACAAGGCTCAGCATGATAGAACAAAAGCTTTATCTTTA
TTTAAAGAAGGGAAATGCCCATTAATGATTGCTACAGATGTCGCTTCACGTGGACTTGAT
ATTCCTGATGTTGAAGTAGTGATTAACTATAGTTATCCTTTGACCACTGAGGACTACGTC
CACAGGATAGGAAGGACTGGTCGTGCTGGCAAGAAAGGTGTTGCACATACCTTTTTCACT
CAAGCGAACAAGGCACTTGCTGGTGAACTTGTGAATGTTCTGCGGGAGGCTGATCAGGTT
GTTCCTCCAGCCCTTATGAAATTTGGCACACATGTCAAGAAAAAGGAATCTAAGATATAC
GGATCTCATTTCAAGGAACAAGGCCTTACTGATTTTTCATCCCTGCTGACGGAAGCTTGA

Peptide Sequence

PEP ID

Zm00001d019449_P014
PEP Infomation

pep chromosome:B73_RefGen_v4:7:34338635:34346907:1 gene:Zm00001d019449 transcript:Zm00001d019449_T014 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-box ATP-dependent RNA helicase 5
Sequence

MKDLIEMGVCCLNEVSFVVLDEADRMLDLGFEPEVRAILSQTSSVRQMVMFSATWPLAVH
KLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEVLDDRTRDSRLLALLDKYHQAQSNRVLV
FVLYKKEAARVETMLQRRGWKAVSVHGDKAQHDRTKALSLFKEGKCPLMIATDVASRGLD
IPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQANKALAGELVNVLREADQV
VPPALMKFGTHVKKKESKIYGSHFKEQGLTDFSSLLTEA

Transcript Sequence

Transcript ID

Zm00001d019449_T014
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:34338635:34346907:1 gene:Zm00001d019449 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-box ATP-dependent RNA helicase 5
Sequence

AGGAAGAAGGTAGGGGGGAAAGCAGGGAAGAAGGCTGTGCCACGGTGCCTCGTGCTATCA
CCAACGAGGGAGCTCGCTCAGCAGATTGCAGATGTACTTAGTGAGGCTGGTGCACCATGT
GGGATAAAATCAGTCTGTCTTTATGGTGGAACTAAAAAGGAACCCCAAATATCTGCCCTT
AAATCTGGAGTGGATATAGTCATAGGAACTCCTGGTCGTATGAAAGACCTTATTGAAATG
GGTGTTTGCTGTCTTAATGAGGTTTCGTTTGTGGTTCTAGATGAAGCAGATAGGATGCTG
GATTTGGGTTTTGAACCTGAAGTCAGGGCAATTTTGAGCCAAACATCATCTGTACGCCAG
ATGGTTATGTTCAGTGCAACATGGCCTCTTGCTGTCCACAAATTAGCCCAGGAGTTTATG
GATCCAAATCCGATAAAGGTTGTTATTGGATCAGAAGACCTTGCTGCTAACCATGACGTG
ATGCAAATTGTTGAAGTATTGGATGATAGAACAAGGGATTCAAGATTACTTGCCTTGCTT
GACAAATACCATCAAGCACAAAGCAACAGGGTTTTGGTTTTTGTGCTGTACAAGAAAGAA
GCTGCACGAGTGGAAACAATGCTTCAGAGAAGGGGATGGAAGGCTGTTTCAGTCCATGGC
GACAAGGCTCAGCATGATAGAACAAAAGCTTTATCTTTATTTAAAGAAGGGAAATGCCCA
TTAATGATTGCTACAGATGTCGCTTCACGTGGACTTGATATTCCTGATGTTGAAGTAGTG
ATTAACTATAGTTATCCTTTGACCACTGAGGACTACGTCCACAGGATAGGAAGGACTGGT
CGTGCTGGCAAGAAAGGTGTTGCACATACCTTTTTCACTCAAGCGAACAAGGCACTTGCT
GGTGAACTTGTGAATGTTCTGCGGGAGGCTGATCAGGTTGTTCCTCCAGCCCTTATGAAA
TTTGGCACACATGTCAAGAAAAAGGAATCTAAGATATACGGATCTCATTTCAAGGAACAA
GGCCTTACTGATTTTTCATCCCTGCTGACGGAAGCTTGATTTCTCCGTTGGTGATGCTAT
GGATGTGATCAGATCAGCCATTTGCAAGCTGATTGCAGCCACGGATGAGTATTGTGGCAG
TGGGCAATCCCAAAATATAGCTCTCTTGTTATAGGTTAGTTTATTATGAGTAGCATTCGG
CTTATGTTTTTCTGGACCGTCCCCATTATGCATTAGCTTGGGCTGCTTGGCTGTATGTAA
TAATAAGCAACATTCTGCTTATTATGATTTGCATTCTCTTGGAGGCTTAGTTTGGAAACT
TAAATCGTCTCCGGTATTTCCAGGGATTGAGTGGGAAAATAAGCTATTTTCCCACTCAAT
CTTCAGGGAAACCGGAGGGGATTTAAGTTTTCAAACTAGCCCAGAGTGTAGTTAAATTCA
GTGCGTCCTTAGTACAAGCAGCCCGGTTATGGTAATGATAGGATAGTGAAAGGTGTACTT
CTATCCTGGTTAGAGTAAAAAAAGAATATGGTTTTCCGTGTTAT