Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019423_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:7:33001955:33007315:-1 gene:Zm00001d019423 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP54
Sequence	ATGTTCGGGACCCCATCCATCACTCCCGCTTTCGGGAACCCCTCCAGCACCCCGGTTTTT GGCACGCCATCCGCCACCCCCGCATTTGGCGCGACGTCGTCCACCCCGGCCTTCGGCACC CTCTCGTCGACGCCTGCCTTCGGCACCCCTTCGTCGACTCCCGCTTTCGGTACCCCGTCG TCTACGCCAGCGTTCGGGACCGCTTCCACGACCCCTGCGTTCGGGGCATCGTCGTCGACG CCAGCGTTCGGGACCACTTCCACGACCCCGCCGTTCGGCTCGCTGAATTTCGGGACGCCC TCGTCGACCTCAGCATTCGGCACGCCGTCTTCGGCGCCGGCGTTCGGCGCACTCAATTTC GGAACACCCTCGTCGACCTCGGCATTCGGCACGCCCTCTTCGGCGCCGGCGTTTGGCGCG ACTCCTTCGCCCTCGCCCTTTGGGTTCCAGCAGCAGGCGACGCCGTCCCCATCTCCGTTC GGCTTGCTAGGAGGTGGCGGCGCGCAAATCACCACCCAGATGGCCCCCGTTGCGCCGCTG CCGCTCTCCCCGTCCGACCGCGACATCCAGGCCATTGTGGATGCGTACAAAGAGGACCCC GGTAATCCACGTTATGCTTTCAGGCATTTGTTGTTCAGCGTGACAGAACCTTCCCAAAGG GTGAAGCCAGTTGCTGCCTCAGATATTATGTGGGCAGAAGCAATGGGGAAACTTGAATGC ATGGATAGTGCAGACAGGGAGAGGCTGTGGCCTCAGCTTGTGCAGGGTTTTAAAGACCTT TCCCATCGGCTTAAGCTTCAAGATGAAGTCCTTGTTTCGGACACTGATAGATTGAGCATG ACTCACTCTAATGTTAAAAAGCTGCAAAGGCATTTCCAAGCTGACACGTATCCTTGGATC CAGCGATTGAAGCAACAAGAGCTGGCTATTCAGAGACGTCTTTTAAGGTTTGTTAGAATA GTGGAGGCATTGGAGAATCGGGGCTACCGCTGTCCTTTAACAAAGGAGGAAGCTGACTTG TATGAAAGATTGGTTGCTATATTAAAGCGGCTAAAAGGACATAACGCTGATCTTGCTAAG AGGGTCAATACACTTGTTTCGACGTCGCGTCTTCTGGCTAGCAGTGGTGGTGCTGGTGGT TCCGTTTATATTCCCAGTTCTGCAAAAGTTGATGAGCGGAGTGTTACAGAGCTTCTTGAG GCCTTACAACAACAAACAGAGGCAGTTGCCAAGCTAGGTAATGTGTTGAAGAGGGATATC AGGGACATGGAGATCATCCAGTCAGAAGGTACGGATATGGCTGAAGACAATGTGGGGAGA AGGGCACAGAAAATATAA

Peptide Sequence

PEP ID	Zm00001d019423_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:7:33001955:33007315:-1 gene:Zm00001d019423 transcript:Zm00001d019423_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP54
Sequence	MFGTPSITPAFGNPSSTPVFGTPSATPAFGATSSTPAFGTLSSTPAFGTPSSTPAFGTPS STPAFGTASTTPAFGASSSTPAFGTTSTTPPFGSLNFGTPSSTSAFGTPSSAPAFGALNF GTPSSTSAFGTPSSAPAFGATPSPSPFGFQQQATPSPSPFGLLGGGGAQITTQMAPVAPL PLSPSDRDIQAIVDAYKEDPGNPRYAFRHLLFSVTEPSQRVKPVAASDIMWAEAMGKLEC MDSADRERLWPQLVQGFKDLSHRLKLQDEVLVSDTDRLSMTHSNVKKLQRHFQADTYPWI QRLKQQELAIQRRLLRFVRIVEALENRGYRCPLTKEEADLYERLVAILKRLKGHNADLAK RVNTLVSTSRLLASSGGAGGSVYIPSSAKVDERSVTELLEALQQQTEAVAKLGNVLKRDI RDMEIIQSEGTDMAEDNVGRRAQKI

Transcript Sequence

Transcript ID	Zm00001d019423_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:33001955:33007315:-1 gene:Zm00001d019423 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP54
Sequence	GAATAACCCCCGGCCCCTCCTTGTTTCCTCACCTCTACTCTCACTAGAACAGAACCCTAA ACCCGCATCCCGAACATTGACGCCGGCGATCTCCGCCGCCACCGCCATGTTCGGGACCCC ATCCATCACTCCCGCTTTCGGGAACCCCTCCAGCACCCCGGTTTTTGGCACGCCATCCGC CACCCCCGCATTTGGCGCGACGTCGTCCACCCCGGCCTTCGGCACCCTCTCGTCGACGCC TGCCTTCGGCACCCCTTCGTCGACTCCCGCTTTCGGTACCCCGTCGTCTACGCCAGCGTT CGGGACCGCTTCCACGACCCCTGCGTTCGGGGCATCGTCGTCGACGCCAGCGTTCGGGAC CACTTCCACGACCCCGCCGTTCGGCTCGCTGAATTTCGGGACGCCCTCGTCGACCTCAGC ATTCGGCACGCCGTCTTCGGCGCCGGCGTTCGGCGCACTCAATTTCGGAACACCCTCGTC GACCTCGGCATTCGGCACGCCCTCTTCGGCGCCGGCGTTTGGCGCGACTCCTTCGCCCTC GCCCTTTGGGTTCCAGCAGCAGGCGACGCCGTCCCCATCTCCGTTCGGCTTGCTAGGAGG TGGCGGCGCGCAAATCACCACCCAGATGGCCCCCGTTGCGCCGCTGCCGCTCTCCCCGTC CGACCGCGACATCCAGGCCATTGTGGATGCGTACAAAGAGGACCCCGGTAATCCACGTTA TGCTTTCAGGCATTTGTTGTTCAGCGTGACAGAACCTTCCCAAAGGGTGAAGCCAGTTGC TGCCTCAGATATTATGTGGGCAGAAGCAATGGGGAAACTTGAATGCATGGATAGTGCAGA CAGGGAGAGGCTGTGGCCTCAGCTTGTGCAGGGTTTTAAAGACCTTTCCCATCGGCTTAA GCTTCAAGATGAAGTCCTTGTTTCGGACACTGATAGATTGAGCATGACTCACTCTAATGT TAAAAAGCTGCAAAGGCATTTCCAAGCTGACACGTATCCTTGGATCCAGCGATTGAAGCA ACAAGAGCTGGCTATTCAGAGACGTCTTTTAAGGTTTGTTAGAATAGTGGAGGCATTGGA GAATCGGGGCTACCGCTGTCCTTTAACAAAGGAGGAAGCTGACTTGTATGAAAGATTGGT TGCTATATTAAAGCGGCTAAAAGGACATAACGCTGATCTTGCTAAGAGGGTCAATACACT TGTTTCGACGTCGCGTCTTCTGGCTAGCAGTGGTGGTGCTGGTGGTTCCGTTTATATTCC CAGTTCTGCAAAAGTTGATGAGCGGAGTGTTACAGAGCTTCTTGAGGCCTTACAACAACA AACAGAGGCAGTTGCCAAGCTAGGTAATGTGTTGAAGAGGGATATCAGGGACATGGAGAT CATCCAGTCAGAAGGTACGGATATGGCTGAAGACAATGTGGGGAGAAGGGCACAGAAAAT ATAAGATTGAAGCATGGTCTTTGTCGTAGCTAAGTAATAAGCGGGTGATGGAAGGGATCC ATCGTCGCTAGAAGGATCTGAGCCTCCAACTTATTTGGAGTAATGGGCCAGGGAAATGAT ATCCCTGTGTAACTGCTGCAGGCAAGCTTGATTCTGCATTCTTTGGGAAGCTAACCATGG TCAATCAGTAGTGGTATGTGTAGATTGTATGTGGAACTGAGGCAGTATTCTTAGAACTCA GCTTTCTCCTCGTGCCAACTACATTTTCAGTGCTGTTTTGTT