Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019365_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:29973892:29976259:-1 gene:Zm00001d019365 gene_biotype:protein_coding transcript_biotype:protein_coding description:phytoene desaturation 1
Sequence	ATGCCAACACGTCGACAACTCCCGACAGCTCTCCGAGCAACCAAGACGCTGCACCCAGTG ACGCCCGTTGTCACCGCGGACCGTGCTGCCGACTTCGCGGGCACCGACCGCTTCCACGTG ATCGACTTCCATCACGTCGAGTTCTGGTGCGCCGACGCCGCCTCCGCTGCCGGCCGCTTC TCCTTCGCGCTCGGGGTACCGCTTGCCGCGCAGTCTGACCTCACCACGGGGAACACCGCG CACGCCTCCCGCCTGCTACGCTCGCGCTCGGGGCCTCTCGCGTTCCTCTTCACCGCCCCG TACGCGGCGCAGCACGGCGCAGACGACGACGCGACGGCCGCGTCGTCCAGCTCCGTGCTG CCGTCCTTCTCCGCGGACGCCGCGCGCCGCTTCGCCGCCGACTACGGCCTCGCGGTGCGC GCCGTCGCGATCCGTGTCTCCGACGCCGCCGAGGCGTTCCGCGCCAGCGTCGACGCGGGC GCGCGCCCGGCCTTCGCCCCCGCTGAGCTCGGCCACGGCTTCGTGTTCGCGGAGGTGGAG CTCTACGGAGACGCCGTGCTCCGCTTCGTGAGCTACCCGGACGGCACGGACGTGTCCTTC CTCCCTGGGTTCGAGAACGTCGCCAGCTCGTCAGCAGAGTGTCCGGACTACGGACTCAAC CGCTTCGACCACATCGTCGGCGGCGTGCCGGACCTGGCTCCGGTCGCCGCGTACATCGCC GGGTTCACTGGCTTCCATGAATTCCACAGGGTCAACGGGAACGAGGTGGGCACGGCCGAG AGCTCGCTCAACGGGCTGGTGCTCGCCAACAGCTCGGAGCACGTGCTCCTCACGCTCCTG GAGCCGGTGCAGGGCACCAAGCGCCGCAGCCAGATACAGACGTTCCTGGACCACCACGGC GGCCCTGGCGTGCAGCACCTGGCGATGGCCAGCGACGACCTTATCGGCACGCTGAGGGAG ATACGTGCGCGGTCCTCCATGGGCGGCTTCGAGCTCCTGCCACCACCGCCGCCCAGCTAC TATGACGGCGTAAGGCGGCTCGCCGGGGACGTGCTGTCGGAGGCACAGATTAAGGAGTGC CAAGAGCTCGGCGTGCGGGTGGACAAGGGTGACAATGGAGGTGTTGTGCTCCAAATCTTC ACCAAGGCTGCTGGAGACAGGCCAACCTTGCTCTTGGAGTTTATCCAAAGGATCGGGTGC GTGGAGATAGACGAGAGCGGGAGGCAATACCAGAAGGGTGGCTGCGGCGGGTTTGCCAAG GATAACGTCATTCATCTGGTGAAATCTATTGAGGACTATGACAAGACACTTGATGCACCT GCCCGAGTTGCTTCCTAA

Peptide Sequence

PEP ID	Zm00001d019365_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:29973892:29976259:-1 gene:Zm00001d019365 transcript:Zm00001d019365_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:phytoene desaturation 1
Sequence	MPTRRQLPTALRATKTLHPVTPVVTADRAADFAGTDRFHVIDFHHVEFWCADAASAAGRF SFALGVPLAAQSDLTTGNTAHASRLLRSRSGPLAFLFTAPYAAQHGADDDATAASSSSVL PSFSADAARRFAADYGLAVRAVAIRVSDAAEAFRASVDAGARPAFAPAELGHGFVFAEVE LYGDAVLRFVSYPDGTDVSFLPGFENVASSSAECPDYGLNRFDHIVGGVPDLAPVAAYIA GFTGFHEFHRVNGNEVGTAESSLNGLVLANSSEHVLLTLLEPVQGTKRRSQIQTFLDHHG GPGVQHLAMASDDLIGTLREIRARSSMGGFELLPPPPPSYYDGVRRLAGDVLSEAQIKEC QELGVRVDKGDNGGVVLQIFTKAAGDRPTLLLEFIQRIGCVEIDESGRQYQKGGCGGFAK DNVIHLVKSIEDYDKTLDAPARVAS

Transcript Sequence

Transcript ID	Zm00001d019365_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:29973892:29976259:-1 gene:Zm00001d019365 gene_biotype:protein_coding transcript_biotype:protein_coding description:phytoene desaturation 1
Sequence	ATGCCAACACGTCGACAACTCCCGACAGCTCTCCGAGCAACCAAGACGCTGCACCCAGTG ACGCCCGTTGTCACCGCGGACCGTGCTGCCGACTTCGCGGGCACCGACCGCTTCCACGTG ATCGACTTCCATCACGTCGAGTTCTGGTGCGCCGACGCCGCCTCCGCTGCCGGCCGCTTC TCCTTCGCGCTCGGGGTACCGCTTGCCGCGCAGTCTGACCTCACCACGGGGAACACCGCG CACGCCTCCCGCCTGCTACGCTCGCGCTCGGGGCCTCTCGCGTTCCTCTTCACCGCCCCG TACGCGGCGCAGCACGGCGCAGACGACGACGCGACGGCCGCGTCGTCCAGCTCCGTGCTG CCGTCCTTCTCCGCGGACGCCGCGCGCCGCTTCGCCGCCGACTACGGCCTCGCGGTGCGC GCCGTCGCGATCCGTGTCTCCGACGCCGCCGAGGCGTTCCGCGCCAGCGTCGACGCGGGC GCGCGCCCGGCCTTCGCCCCCGCTGAGCTCGGCCACGGCTTCGTGTTCGCGGAGGTGGAG CTCTACGGAGACGCCGTGCTCCGCTTCGTGAGCTACCCGGACGGCACGGACGTGTCCTTC CTCCCTGGGTTCGAGAACGTCGCCAGCTCGTCAGCAGAGTGTCCGGACTACGGACTCAAC CGCTTCGACCACATCGTCGGCGGCGTGCCGGACCTGGCTCCGGTCGCCGCGTACATCGCC GGGTTCACTGGCTTCCATGAATTCCACAGGGTCAACGGGAACGAGGTGGGCACGGCCGAG AGCTCGCTCAACGGGCTGGTGCTCGCCAACAGCTCGGAGCACGTGCTCCTCACGCTCCTG GAGCCGGTGCAGGGCACCAAGCGCCGCAGCCAGATACAGACGTTCCTGGACCACCACGGC GGCCCTGGCGTGCAGCACCTGGCGATGGCCAGCGACGACCTTATCGGCACGCTGAGGGAG ATACGTGCGCGGTCCTCCATGGGCGGCTTCGAGCTCCTGCCACCACCGCCGCCCAGCTAC TATGACGGCGTAAGGCGGCTCGCCGGGGACGTGCTGTCGGAGGCACAGATTAAGGAGTGC CAAGAGCTCGGCGTGCGGGTGGACAAGGGTGACAATGGAGGTGTTGTGCTCCAAATCTTC ACCAAGGCTGCTGGAGACAGGCCAACCTTGCTCTTGGAGTTTATCCAAAGGATCGGGTGC GTGGAGATAGACGAGAGCGGGAGGCAATACCAGAAGGGTGGCTGCGGCGGGTTTGCCAAG GATAACGTCATTCATCTGGTGAAATCTATTGAGGACTATGACAAGACACTTGATGCACCT GCCCGAGTTGCTTCCTAATCCTAAACAACATTTATCATCTCTCTGATTGAGGGAGTTACT AGCACTATTAAACTTTGTAATGGTAATAATGCACCTAGTTATTAGTGCATGGTAGTGGTA TCAAACCATATGGTGCGTGTACTATCGAATCTCCTCCTTATCTTCTCTGTTTTGGATACT GTATTAATTAATGTGTGCTACAATGTCTAAAAATAGTGTTAATCGAGTTTGTAAAAAAAG TATCAATGATATTAATA