Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019348_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:7:29123712:29128367:1 gene:Zm00001d019348 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/FYVE/PHD-type zinc finger family protein
Sequence

ATGTCAACACGTAGGGAGGTTGTCTTGTATCACCCATTGCCTGCACCAGGAGTGACAAAC
AACCTCAAGGATGGGATCCAGTCAAAAGTTATGGAAACGGTTGGCAATGCAATCAACTCA
TTCGATCCAAATGCGTTGCCTCGGCATATAGAAGGGGCATTGGGAACAGCTGGAAACCTC
ATTAACTCATTTGAGCCAAAATGGTCTGGGAAAAATGAGTTTGATTTAAATGGGGAAGCT
GATTTCCTTGATGGATATGAATGCCCTGATGAATATTGGGGCTCTGCACCTGTGAAGGCG
CACAAACCAGTTAACATTAAGAACCTGCTGGGTGGCGTTATTGCGATAATCGGTCGCAAT
TTGGGAAATACTGAAGCTGAACAGCCAAAGGACACTAAGACCAGTGTCTCATTCCTTGGG
TCGGCTGATGATGGTAACACATTCTTGCATTCCTCAGTCTACATGCCAAGTGCTCCACCA
GTACTTGATGAAGAAGCCTTAAATTACAACATTTATAGGGCTGTACTGGAAGCAGAGCCA
CCAGAATGGCTTCCTGACAGTTATGCTAGTGCGTGTATGCAGTGCGCTGCTCTTTTTACT
GCCCTTACACGTGGAAGGCATCATTGTCGATTCTGTGGAGGGATATTTTGCAGGGCATGC
TCAAAGGGACGATCGCTGTTGCCTGCCAAGTTCCGTGAGCGGAATCCGCAAAGAGTCTGT
GATGCTTGTTATGATAGGCTTGATCCATTGCAGAACTTATTGATTAATTCTGTCAGCAAT
GCCTCACAAACTGCAAAGCATGATGTCATGGATTGGACTTGTGCAAGAGGGTGGTTAAAT
TTTCCCATTGGATTAACAATGGAGCATGAGATATACAAGGCAGCGAATACCTTGACAAGT
TACAGCCAGGTGGCAAGAATAAACCCTGAGAAGTCTATTCCCCATGCAGTTCTTAGTGGA
GCAAGTGGGCTTGCCATATTGACAGTTGTAAAAGCTGGTGCTATTCTTACTTACAAACTT
GGAACTGGCCTAGTAGTTGCTCGAAGATCTGATGGATCATGGTCTGCACCATCTGCTATA
CTTTCTGCTGGTTTTGGATGGGGAGCACAGGTTGGTGGTGAGCTTATGGATTTCATCATA
GTGCTTCGTGGCCCAGAAGCTGTCCAAACTTTCTGCAGTCGAATGCATTTTTCACTTGGG
GCAGGTGTAAGTGCTGCAGCAGGACCTGTGGGCAGAGTAGCAGAAGCAGACCTGAGAGCT
GGTGATAAAGGATCAGGAGTTTGCTATACATACAGCTGCAGCAAAGGTGCATTTATTGGT
GTCTCATTAGAAGGGAATCTAGTTGCCACACGGATGGATGCTAATCTGCGGTTTTATGGT
GACCCATATCTAACAACCAGCGACATTCTCACGGGGAATGTGGAACAGCCAAATGCTGCC
AAATTTCTTTACACTGCACTGGATAATCTATACTCAGGGCTGGATTGGTAG

Peptide Sequence

PEP ID

Zm00001d019348_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:7:29123712:29128367:1 gene:Zm00001d019348 transcript:Zm00001d019348_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/FYVE/PHD-type zinc finger family protein
Sequence

MSTRREVVLYHPLPAPGVTNNLKDGIQSKVMETVGNAINSFDPNALPRHIEGALGTAGNL
INSFEPKWSGKNEFDLNGEADFLDGYECPDEYWGSAPVKAHKPVNIKNLLGGVIAIIGRN
LGNTEAEQPKDTKTSVSFLGSADDGNTFLHSSVYMPSAPPVLDEEALNYNIYRAVLEAEP
PEWLPDSYASACMQCAALFTALTRGRHHCRFCGGIFCRACSKGRSLLPAKFRERNPQRVC
DACYDRLDPLQNLLINSVSNASQTAKHDVMDWTCARGWLNFPIGLTMEHEIYKAANTLTS
YSQVARINPEKSIPHAVLSGASGLAILTVVKAGAILTYKLGTGLVVARRSDGSWSAPSAI
LSAGFGWGAQVGGELMDFIIVLRGPEAVQTFCSRMHFSLGAGVSAAAGPVGRVAEADLRA
GDKGSGVCYTYSCSKGAFIGVSLEGNLVATRMDANLRFYGDPYLTTSDILTGNVEQPNAA
KFLYTALDNLYSGLDW

Transcript Sequence

Transcript ID

Zm00001d019348_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:29123712:29128367:1 gene:Zm00001d019348 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/FYVE/PHD-type zinc finger family protein
Sequence

AACTCGGCTCGGCTCAACAAGCCACGCAACCTTCCGCCGTCGAGACTCGTGAGGCGTCGT
CGCCCCTGCCCTCTCTGCCGACAGGGGACAGGGTGGAGAGTTGCCCGGGCTCGGGTTGAC
TCGTGTGGGCGCCTCTTTCACGCGTTCAAAGTTGTGTGCTATTCATTGATTGCCATGTCA
ACACGTAGGGAGGTTGTCTTGTATCACCCATTGCCTGCACCAGGAGTGACAAACAACCTC
AAGGATGGGATCCAGTCAAAAGTTATGGAAACGGTTGGCAATGCAATCAACTCATTCGAT
CCAAATGCGTTGCCTCGGCATATAGAAGGGGCATTGGGAACAGCTGGAAACCTCATTAAC
TCATTTGAGCCAAAATGGTCTGGGAAAAATGAGTTTGATTTAAATGGGGAAGCTGATTTC
CTTGATGGATATGAATGCCCTGATGAATATTGGGGCTCTGCACCTGTGAAGGCGCACAAA
CCAGTTAACATTAAGAACCTGCTGGGTGGCGTTATTGCGATAATCGGTCGCAATTTGGGA
AATACTGAAGCTGAACAGCCAAAGGACACTAAGACCAGTGTCTCATTCCTTGGGTCGGCT
GATGATGGTAACACATTCTTGCATTCCTCAGTCTACATGCCAAGTGCTCCACCAGTACTT
GATGAAGAAGCCTTAAATTACAACATTTATAGGGCTGTACTGGAAGCAGAGCCACCAGAA
TGGCTTCCTGACAGTTATGCTAGTGCGTGTATGCAGTGCGCTGCTCTTTTTACTGCCCTT
ACACGTGGAAGGCATCATTGTCGATTCTGTGGAGGGATATTTTGCAGGGCATGCTCAAAG
GGACGATCGCTGTTGCCTGCCAAGTTCCGTGAGCGGAATCCGCAAAGAGTCTGTGATGCT
TGTTATGATAGGCTTGATCCATTGCAGAACTTATTGATTAATTCTGTCAGCAATGCCTCA
CAAACTGCAAAGCATGATGTCATGGATTGGACTTGTGCAAGAGGGTGGTTAAATTTTCCC
ATTGGATTAACAATGGAGCATGAGATATACAAGGCAGCGAATACCTTGACAAGTTACAGC
CAGGTGGCAAGAATAAACCCTGAGAAGTCTATTCCCCATGCAGTTCTTAGTGGAGCAAGT
GGGCTTGCCATATTGACAGTTGTAAAAGCTGGTGCTATTCTTACTTACAAACTTGGAACT
GGCCTAGTAGTTGCTCGAAGATCTGATGGATCATGGTCTGCACCATCTGCTATACTTTCT
GCTGGTTTTGGATGGGGAGCACAGGTTGGTGGTGAGCTTATGGATTTCATCATAGTGCTT
CGTGGCCCAGAAGCTGTCCAAACTTTCTGCAGTCGAATGCATTTTTCACTTGGGGCAGGT
GTAAGTGCTGCAGCAGGACCTGTGGGCAGAGTAGCAGAAGCAGACCTGAGAGCTGGTGAT
AAAGGATCAGGAGTTTGCTATACATACAGCTGCAGCAAAGGTGCATTTATTGGTGTCTCA
TTAGAAGGGAATCTAGTTGCCACACGGATGGATGCTAATCTGCGGTTTTATGGTGACCCA
TATCTAACAACCAGCGACATTCTCACGGGGAATGTGGAACAGCCAAATGCTGCCAAATTT
CTTTACACTGCACTGGATAATCTATACTCAGGGCTGGATTGGTAGTGTACATATGTACTT
TGAATTTTTTTTTCGATTGTAAAAGTTGTATATATCCACAAAATGCTTTCGTTTGTTCGG
CGTGGCAAAATAATTAATGAAATGCTCTGTATTAA