Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019343_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:28785037:28786860:1 gene:Zm00001d019343 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GNAT-transcription factor 32 description:Histone acetyltransferase HPA2 and related acetyltransferases

Sequence

ATGGCCGTCCTCCGCGCGTCGCCGCCGCCCTTTCTCCCCCATCCGCTCTCGCGCCCCTCT
CAGTGCAAGCGGCGCCCCACCTGCCGCGTGGTCGCAGCCACAGCCAGACCCAGTCCTGCT
CCTTCCAGGCCCAGGAGCGGCGGCGTCCATGGAGGCCGCCCCAAGAGGGGGCTTCTTGCG
GCAAGGAGAAGGCCGGCGGAGGGGCGGGTGCCCTGCTTGCGGGCCACGGAGGCGGGGGTC
GGTGCGGCAGGCGTCGCGAAGGAGGAAGACGAGTACCTGGCGCGGGAGGCCGGGTGGGGC
GTGCGGCGGATGGCACGGGTTGGGGAGGAGATGCGGCGGGTGGCGCAGGTCCAGGCCGAG
GCCTTCCACGTCCCCGTCGCGCTCTTCAACGACTTCTTCTTCGACTTCTTCAAAGCCGAG
GTGCTGTCGGCGCTCATCTACAGAGTGAGGAACTCGCCGCCTGACAGATACGCTTGTTTG
GTGGCTGAAGAAGCTGAGGCAGCCGACCAGCCGTCAAAGGCACCATATGAGAAGATCGTC
GGGGTTGTGGATTGCACGGTGCAGGACGAAGACGGCATCCTAAAGCACCTTCGAGGCGCG
GATGAATACCTCTACGTGTCAGGAATTGCAGTCTTGCCACCATTCAGGAGGAGGAAGGTA
GGGACCGCACTGCTGAAGGCCTGCGAGGCACTGGGGCTCCAATGGAGGCACGTGTTCATG
GTTCTGAGGGCGTACGAGGATGACGACGGCGCTCGAGGCCTCTACTCCAAGGCAGGGTAC
AGGGTCGTGTCAAGGGATCCAGACTGGGTCTCCTGGGTGGGGAGGAGGAGGCGAGTTGTC
ATGGTAAAGGAGCTGCCGGTTCACGATGATCAATGA

Peptide Sequence

PEP ID

Zm00001d019343_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:28785037:28786860:1 gene:Zm00001d019343 transcript:Zm00001d019343_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GNAT-transcription factor 32 description:Histone acetyltransferase HPA2 and related acetyltransferases

Sequence

MAVLRASPPPFLPHPLSRPSQCKRRPTCRVVAATARPSPAPSRPRSGGVHGGRPKRGLLA
ARRRPAEGRVPCLRATEAGVGAAGVAKEEDEYLAREAGWGVRRMARVGEEMRRVAQVQAE
AFHVPVALFNDFFFDFFKAEVLSALIYRVRNSPPDRYACLVAEEAEAADQPSKAPYEKIV
GVVDCTVQDEDGILKHLRGADEYLYVSGIAVLPPFRRRKVGTALLKACEALGLQWRHVFM
VLRAYEDDDGARGLYSKAGYRVVSRDPDWVSWVGRRRRVVMVKELPVHDDQ

Transcript Sequence

Transcript ID

Zm00001d019343_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:28785037:28786860:1 gene:Zm00001d019343 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GNAT-transcription factor 32 description:Histone acetyltransferase HPA2 and related acetyltransferases

Sequence

GAAATCCGAATCCATGGCCGTCCTCCGCGCGTCGCCGCCGCCCTTTCTCCCCCATCCGCT
CTCGCGCCCCTCTCAGTGCAAGCGGCGCCCCACCTGCCGCGTGGTCGCAGCCACAGCCAG
ACCCAGTCCTGCTCCTTCCAGGCCCAGGAGCGGCGGCGTCCATGGAGGCCGCCCCAAGAG
GGGGCTTCTTGCGGCAAGGAGAAGGCCGGCGGAGGGGCGGGTGCCCTGCTTGCGGGCCAC
GGAGGCGGGGGTCGGTGCGGCAGGCGTCGCGAAGGAGGAAGACGAGTACCTGGCGCGGGA
GGCCGGGTGGGGCGTGCGGCGGATGGCACGGGTTGGGGAGGAGATGCGGCGGGTGGCGCA
GGTCCAGGCCGAGGCCTTCCACGTCCCCGTCGCGCTCTTCAACGACTTCTTCTTCGACTT
CTTCAAAGCCGAGGTGCTGTCGGCGCTCATCTACAGAGTGAGGAACTCGCCGCCTGACAG
ATACGCTTGTTTGGTGGCTGAAGAAGCTGAGGCAGCCGACCAGCCGTCAAAGGCACCATA
TGAGAAGATCGTCGGGGTTGTGGATTGCACGGTGCAGGACGAAGACGGCATCCTAAAGCA
CCTTCGAGGCGCGGATGAATACCTCTACGTGTCAGGAATTGCAGTCTTGCCACCATTCAG
GAGGAGGAAGGTAGGGACCGCACTGCTGAAGGCCTGCGAGGCACTGGGGCTCCAATGGAG
GCACGTGTTCATGGTTCTGAGGGCGTACGAGGATGACGACGGCGCTCGAGGCCTCTACTC
CAAGGCAGGGTACAGGGTCGTGTCAAGGGATCCAGACTGGGTCTCCTGGGTGGGGAGGAG
GAGGCGAGTTGTCATGGTAAAGGAGCTGCCGGTTCACGATGATCAATGACGCCGGCACGG
TTTTGTTGAATATGTGTGTGTGTGTCACCAGCTAATTTGTACTGTTTCTTGTCCATATTC
GCGGCATCATGCATGTCTTTTTGGACAATAGAGGAGAGACAGTTGCCTATCTTCCCACCA
AACACAAAATGAAAATTGAGAAGTTACAGTTGACAAGTT