Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019342_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:7:28764636:28767309:1 gene:Zm00001d019342 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:variant in methylation104 description:E3 ubiquitin-protein ligase ORTHRUS 2
Sequence	ATGGTGCAGCAACCACGAATCAACTCTGCAATAGTGAGTGCCATCCGTGCGGCCAGGATG TCAAAGAACACTAATCCAGCAGCAGCCGGCTCATCAGCAGGCTCGCATCACTATATACAG AATGTTGATAGGCCCGACAGGGCATACACAACTGAAAGGGCCAAGCGAGGCGGAAAGGCA AACGCTTCGAGCGGCCAGATCTTTGTGACGACTGCGCCGGATCATTTTGGGCCAATCCTT GCCGAACATGACCCCAGGAGGAACACCGGTGTGCGAGTTGGAGAAACATGGGAAGATAGA CTTGAGTGTAGGCAATGGGGTGCTCATCTGCCTCACATAGCCGGAATTGCTGGGCAGAGC AGATTTGGTGCTCAATCAGTCGCCCTGTCCGGAGGCTACGAAGATGATGAAGACCACGGG GAGTGGTTCCTTTATACCGGAAGTGGCGGGAGGGATCTAAGTGGAAACAAGCGAACAAAT AAGGAGCAAGGTTTTGATCAAACATTTGTGAAGATGAATGAGGCTCTCCGACAAAGCTGC TTGAGGGGTTACCCTGTTCGGGTTGTACGGTCCCATAAAGAGAAACGCTCTTCGTACGCT CCTGAATTGGGTGTGAGGTATGATGGAATTTACAGGATTGAGAAGTGTTGGAGGAAGATT GGTGTTCAGGGAACGTTCAAAGTCTGCAGGTATCTGTTTGTACGCTGTGACAATGAACCA GCACCTTGGACCAGTGATGATCATGGTGACCGTCCAAGGCCATTGCCCAACATTCCCGAG TTAAAAGATGCAACTGATATAAATGAGAGAGATGAGCGTCCTTCATGGGGCTACGATGAG AAGGAAGGCCGCTGGAAATGGATGTACGAGCCGCCAACGAGCAGGAAACCTGTTCGCACT GGGCTTCGTCCTAAGACCGGCAAGCAAGCCCGGAAAAGAGCAAGGAGTGATGAGATGCCT AACGACCCTGAAAAACTCCTGAATGAGTTTAGCTGTTGTATCTGCTTCCAAGTGATGGCA GAGCCACTCACTGCTCCCTGTGGTGACAGCTTCTGCAAGGCTTGTCTGCTGGGGGCATAT GATAACCAGTCCTCCGTGAGAGAAAGAAGCCATGGCGGCCGCACTCTGAGGGCTCAGAAG ATCGTCAAGAGATGCCCATCCTGTGCAACTGACATCAGCGACTTCCTAGCGGATCCACAG ATCAACCGAGACATAATGGATGTGATTGAGTCACTGCAACGGAAAGGCGACACCACCACC AAGGACGACGCTGCTTCATATGGATATGGTGCTGACAAGGCCGAGGAATTCCGTGGTGGT GACCTGCAAGAGGAAGCTGATCCGGAGATGGATGCTGAGGATAACTCTGAATCTGACACG GATGCTGATGCTTCTTGTGGCAGAACTGTGGTTGGGATCAAGGATCAGGAAGGCCAGCAG CTGCAGCCCCAGAAGCGCAAGGGTGGCGTTGCCATTATTGGCACTGATGATGGTCCTAGC AAAAGGATTACAGCAAGTGCTGATGTGGAACAGAAAGGTAATAAGAGCCATGAATAG

Peptide Sequence

PEP ID	Zm00001d019342_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:7:28764636:28767309:1 gene:Zm00001d019342 transcript:Zm00001d019342_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:variant in methylation104 description:E3 ubiquitin-protein ligase ORTHRUS 2
Sequence	MVQQPRINSAIVSAIRAARMSKNTNPAAAGSSAGSHHYIQNVDRPDRAYTTERAKRGGKA NASSGQIFVTTAPDHFGPILAEHDPRRNTGVRVGETWEDRLECRQWGAHLPHIAGIAGQS RFGAQSVALSGGYEDDEDHGEWFLYTGSGGRDLSGNKRTNKEQGFDQTFVKMNEALRQSC LRGYPVRVVRSHKEKRSSYAPELGVRYDGIYRIEKCWRKIGVQGTFKVCRYLFVRCDNEP APWTSDDHGDRPRPLPNIPELKDATDINERDERPSWGYDEKEGRWKWMYEPPTSRKPVRT GLRPKTGKQARKRARSDEMPNDPEKLLNEFSCCICFQVMAEPLTAPCGDSFCKACLLGAY DNQSSVRERSHGGRTLRAQKIVKRCPSCATDISDFLADPQINRDIMDVIESLQRKGDTTT KDDAASYGYGADKAEEFRGGDLQEEADPEMDAEDNSESDTDADASCGRTVVGIKDQEGQQ LQPQKRKGGVAIIGTDDGPSKRITASADVEQKGNKSHE

Transcript Sequence

Transcript ID	Zm00001d019342_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:28764636:28767309:1 gene:Zm00001d019342 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:variant in methylation104 description:E3 ubiquitin-protein ligase ORTHRUS 2
Sequence	AGACACCATGTGGCCACAATTTCTGCCTGAAGTGCTTCAACCGGTGGACACATAATGGAG CAAGCGCATGTGGAAAATGCCGTAGACCGATCCCCTACAAAATGGTGCAGCAACCACGAA TCAACTCTGCAATAGTGAGTGCCATCCGTGCGGCCAGGATGTCAAAGAACACTAATCCAG CAGCAGCCGGCTCATCAGCAGGCTCGCATCACTATATACAGAATGTTGATAGGCCCGACA GGGCATACACAACTGAAAGGGCCAAGCGAGGCGGAAAGGCAAACGCTTCGAGCGGCCAGA TCTTTGTGACGACTGCGCCGGATCATTTTGGGCCAATCCTTGCCGAACATGACCCCAGGA GGAACACCGGTGTGCGAGTTGGAGAAACATGGGAAGATAGACTTGAGTGTAGGCAATGGG GTGCTCATCTGCCTCACATAGCCGGAATTGCTGGGCAGAGCAGATTTGGTGCTCAATCAG TCGCCCTGTCCGGAGGCTACGAAGATGATGAAGACCACGGGGAGTGGTTCCTTTATACCG GAAGTGGCGGGAGGGATCTAAGTGGAAACAAGCGAACAAATAAGGAGCAAGGTTTTGATC AAACATTTGTGAAGATGAATGAGGCTCTCCGACAAAGCTGCTTGAGGGGTTACCCTGTTC GGGTTGTACGGTCCCATAAAGAGAAACGCTCTTCGTACGCTCCTGAATTGGGTGTGAGGT ATGATGGAATTTACAGGATTGAGAAGTGTTGGAGGAAGATTGGTGTTCAGGGAACGTTCA AAGTCTGCAGGTATCTGTTTGTACGCTGTGACAATGAACCAGCACCTTGGACCAGTGATG ATCATGGTGACCGTCCAAGGCCATTGCCCAACATTCCCGAGTTAAAAGATGCAACTGATA TAAATGAGAGAGATGAGCGTCCTTCATGGGGCTACGATGAGAAGGAAGGCCGCTGGAAAT GGATGTACGAGCCGCCAACGAGCAGGAAACCTGTTCGCACTGGGCTTCGTCCTAAGACCG GCAAGCAAGCCCGGAAAAGAGCAAGGAGTGATGAGATGCCTAACGACCCTGAAAAACTCC TGAATGAGTTTAGCTGTTGTATCTGCTTCCAAGTGATGGCAGAGCCACTCACTGCTCCCT GTGGTGACAGCTTCTGCAAGGCTTGTCTGCTGGGGGCATATGATAACCAGTCCTCCGTGA GAGAAAGAAGCCATGGCGGCCGCACTCTGAGGGCTCAGAAGATCGTCAAGAGATGCCCAT CCTGTGCAACTGACATCAGCGACTTCCTAGCGGATCCACAGATCAACCGAGACATAATGG ATGTGATTGAGTCACTGCAACGGAAAGGCGACACCACCACCAAGGACGACGCTGCTTCAT ATGGATATGGTGCTGACAAGGCCGAGGAATTCCGTGGTGGTGACCTGCAAGAGGAAGCTG ATCCGGAGATGGATGCTGAGGATAACTCTGAATCTGACACGGATGCTGATGCTTCTTGTG GCAGAACTGTGGTTGGGATCAAGGATCAGGAAGGCCAGCAGCTGCAGCCCCAGAAGCGCA AGGGTGGCGTTGCCATTATTGGCACTGATGATGGTCCTAGCAAAAGGATTACAGCAAGTG CTGATGTGGAACAGAAAGGTAATAAGAGCCATGAATAGCGGATGGTGGTGGATGCTAGCT GATCGATGATGGCTTGGAAACACAAATTAAGTCAGCATGTTGTTGTAGCCATATTGCATG TATGGCGCCGAGACTGAGAGAGGTTTGGACTGTTTTC