Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019337_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:7:28496604:28501205:1 gene:Zm00001d019337 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ domain-containing protein

Sequence

ATGGCGGCGGACGCGGCGCAGCAGGGCCCGGGCGTCCACCGGAGGCGCGGCGGGGCCGCC
CCGCGCGCCTGGTGCTGCTCCTTCGCCGGCGTGCCCGACAGCCCCGACCTCCGCCCGATC
CCCTCCTCGGCAGCGTCCCCTGCGGCGGCGTCGAGGAAGCTGCCGCCCAAGTCCCCGTCG
GCGGCGTCCTTCTACGGCTCGCCCACCTCGTCCAGGCTCGCGGGCCTCGGCGGCCTCATC
GACCCGCGCCGCATCCTCTCGCCCGGCCGCGTCTCCCCCATCGACCCCGACGGCGCCGTC
CCGCTCCCTCCTCCTACGCCGCCGCCGCCGCCGCCCGCTGAGTTTCCGGCAGCTGTGGGC
ACCGCGGAGCAGCCGGCGCCGGTGCTGGCGTCGGCATTGCCCTCGGCAGCGGCGGCGCCG
CAGGTGGTGTCCGTGCGGGAGGAAGCGGACGCGCACGCGGCTGGCGTGCTGGATCTGAAG
CTCTTCCTGCGGGGGAGGGACGGGAGGTGCGTCCTCATGGAGCTCGACTCCAGGGTGTTG
TGCGGCTGCAGCGACTTCTTCGCCGCCATGGCCCCGCACGAGGACGCTGCTGCCACTGCT
GCTGGTGCCGGCGCTGCCGGGAAGACGATCGAGGTGGACGGGGTCGATAATTTGGATGCT
TTCAGGGCTGCAGTGGAACTCATGTACGACCCTGATCCAATGCGGGGTCTTGCAGCTGCC
GGTGTGTCAAGGGCTATAGATGTGCTTGAGGTATGCTCCTCTATCATGTTCAGCAAGGGA
ATCAAAACATGTTTGACATACATAGAAGCTGTTCCCTGGAATGAGAACGAGGAGGAGAAG
CTGAAGAATCTCTTTGCAAGATTCACTTTTGACGAAGCAATATCCCAGGATATACTGGCA
AGACTGCGACCACACAACTGGAAAAGCTCAGATGACCTCGCTGTACAGCTTATTCAATCT
GTCACTAACAGCACCAGCACTATGGCAAGAAAAGACATGCAATCTTTGGTGAATGGTCTT
CTAAGCAAAAGTTCAGTCTATCAAAAGGACTCGTCAGGATTAAACAAGGAGAGCCTGTAT
CAGATCTGTTATTCATGTCTAGAGTCACTGGTGGACCTCTTTGAAGAGGCCATAGAACCA
ACATATTACACAGGTCAGGCTGTGGTAGTTAGAGGGAGCAAACCACTGATCGAGCGAATC
TCTACGCAAACAGAGAACCTCAATTGGCTATTGGATATTCTAGTAAACATTGACATTGCA
GAAGAATTTGTAGAACTGTGGGCGAAGCAAGGCAGGCTCATTAGGATGCACGAGCAAGCA
TCAGCGATCGTCAGGTATGAGCTAAGTCGAATATCAGCTGGTGTGTTCATTGCACTTGGT
AAAGGAAAAGTGCAGTGTCGTGGTGACGTACGAAGCCTCCTCTTTCATGGATGGTTCAGC
ACAATGTTGTTGGATTTTGGCTGGCTTCAGCGCTGCCCCAAAGGTCTCGACCTAAGATCG
TTGGAGGAGAATTTAGGGCGAGGCCTTTTAACCCTCCCTCTCAGGCAGCAGCAATGTTTG
TTCGAGGAATGGTTCCAGTTCTATGCGACCAAAGGACCCGAGTGTCCGAACCTTATTAGA
GCTTTCCAGGTATGGTGGAGAAGGTCTTTCATTAGATCATTGGTAGAACCTCAAAACTAA

Peptide Sequence

PEP ID

Zm00001d019337_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:7:28496604:28501205:1 gene:Zm00001d019337 transcript:Zm00001d019337_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ domain-containing protein

Sequence

MAADAAQQGPGVHRRRGGAAPRAWCCSFAGVPDSPDLRPIPSSAASPAAASRKLPPKSPS
AASFYGSPTSSRLAGLGGLIDPRRILSPGRVSPIDPDGAVPLPPPTPPPPPPAEFPAAVG
TAEQPAPVLASALPSAAAAPQVVSVREEADAHAAGVLDLKLFLRGRDGRCVLMELDSRVL
CGCSDFFAAMAPHEDAAATAAGAGAAGKTIEVDGVDNLDAFRAAVELMYDPDPMRGLAAA
GVSRAIDVLEVCSSIMFSKGIKTCLTYIEAVPWNENEEEKLKNLFARFTFDEAISQDILA
RLRPHNWKSSDDLAVQLIQSVTNSTSTMARKDMQSLVNGLLSKSSVYQKDSSGLNKESLY
QICYSCLESLVDLFEEAIEPTYYTGQAVVVRGSKPLIERISTQTENLNWLLDILVNIDIA
EEFVELWAKQGRLIRMHEQASAIVRYELSRISAGVFIALGKGKVQCRGDVRSLLFHGWFS
TMLLDFGWLQRCPKGLDLRSLEENLGRGLLTLPLRQQQCLFEEWFQFYATKGPECPNLIR
AFQVWWRRSFIRSLVEPQN

Transcript Sequence

Transcript ID

Zm00001d019337_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:28496604:28501205:1 gene:Zm00001d019337 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ domain-containing protein

Sequence

GGAGATAGCTTTCACTGGACTGCAAGGCTGCTTGCTGCCACTCCTCGAACCCGTCGCCCC
TGTCTGCGCCGTGTTCCTCTTCCCAATGGCCTCCTCCTCCTCCGTCCCACCGGAACCCTA
GCGCCGCGGCCCACCACTACCAGCTCGCTCGGCTCGTGTCCAGATCCCACGCCGCGCCAC
ACCACATGGCGGCGGACGCGGCGCAGCAGGGCCCGGGCGTCCACCGGAGGCGCGGCGGGG
CCGCCCCGCGCGCCTGGTGCTGCTCCTTCGCCGGCGTGCCCGACAGCCCCGACCTCCGCC
CGATCCCCTCCTCGGCAGCGTCCCCTGCGGCGGCGTCGAGGAAGCTGCCGCCCAAGTCCC
CGTCGGCGGCGTCCTTCTACGGCTCGCCCACCTCGTCCAGGCTCGCGGGCCTCGGCGGCC
TCATCGACCCGCGCCGCATCCTCTCGCCCGGCCGCGTCTCCCCCATCGACCCCGACGGCG
CCGTCCCGCTCCCTCCTCCTACGCCGCCGCCGCCGCCGCCCGCTGAGTTTCCGGCAGCTG
TGGGCACCGCGGAGCAGCCGGCGCCGGTGCTGGCGTCGGCATTGCCCTCGGCAGCGGCGG
CGCCGCAGGTGGTGTCCGTGCGGGAGGAAGCGGACGCGCACGCGGCTGGCGTGCTGGATC
TGAAGCTCTTCCTGCGGGGGAGGGACGGGAGGTGCGTCCTCATGGAGCTCGACTCCAGGG
TGTTGTGCGGCTGCAGCGACTTCTTCGCCGCCATGGCCCCGCACGAGGACGCTGCTGCCA
CTGCTGCTGGTGCCGGCGCTGCCGGGAAGACGATCGAGGTGGACGGGGTCGATAATTTGG
ATGCTTTCAGGGCTGCAGTGGAACTCATGTACGACCCTGATCCAATGCGGGGTCTTGCAG
CTGCCGGTGTGTCAAGGGCTATAGATGTGCTTGAGGTATGCTCCTCTATCATGTTCAGCA
AGGGAATCAAAACATGTTTGACATACATAGAAGCTGTTCCCTGGAATGAGAACGAGGAGG
AGAAGCTGAAGAATCTCTTTGCAAGATTCACTTTTGACGAAGCAATATCCCAGGATATAC
TGGCAAGACTGCGACCACACAACTGGAAAAGCTCAGATGACCTCGCTGTACAGCTTATTC
AATCTGTCACTAACAGCACCAGCACTATGGCAAGAAAAGACATGCAATCTTTGGTGAATG
GTCTTCTAAGCAAAAGTTCAGTCTATCAAAAGGACTCGTCAGGATTAAACAAGGAGAGCC
TGTATCAGATCTGTTATTCATGTCTAGAGTCACTGGTGGACCTCTTTGAAGAGGCCATAG
AACCAACATATTACACAGGTCAGGCTGTGGTAGTTAGAGGGAGCAAACCACTGATCGAGC
GAATCTCTACGCAAACAGAGAACCTCAATTGGCTATTGGATATTCTAGTAAACATTGACA
TTGCAGAAGAATTTGTAGAACTGTGGGCGAAGCAAGGCAGGCTCATTAGGATGCACGAGC
AAGCATCAGCGATCGTCAGGTATGAGCTAAGTCGAATATCAGCTGGTGTGTTCATTGCAC
TTGGTAAAGGAAAAGTGCAGTGTCGTGGTGACGTACGAAGCCTCCTCTTTCATGGATGGT
TCAGCACAATGTTGTTGGATTTTGGCTGGCTTCAGCGCTGCCCCAAAGGTCTCGACCTAA
GATCGTTGGAGGAGAATTTAGGGCGAGGCCTTTTAACCCTCCCTCTCAGGCAGCAGCAAT
GTTTGTTCGAGGAATGGTTCCAGTTCTATGCGACCAAAGGACCCGAGTGTCCGAACCTTA
TTAGAGCTTTCCAGGTATGGTGGAGAAGGTCTTTCATTAGATCATTGGTAGAACCTCAAA
ACTAAGTTTTTCCTTGATGTACTAGTATGTTGCGTGTATGATTTGTAAAATTGCAACTGT
TCTGATGACCCTTAAAAATGTTTTTTCGTTTGTAGTTTAGTTCTTCCCATTGTATGTGAA
TAGCTGGATGAATTTGCTTG