Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019282_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:25495547:25499141:1 gene:Zm00001d019282 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	ATGCTCAACTGTAGCAGGAAGATGGGTAGATCCGCGAGTGTTCTTCAAGTCCTTCTGGTT TCCGCAACCATCGTTGTTGCTCAGACGCAATGGGCTAGTGGTGTATGGGGCATGTACTGC GAGGACTTGACAGCGAGTGTAGAAAGGCCGCACAGGGCCTCGGTAACCGATTTCGGCGCC GTCGGAGATGGTGCGACTCTTAACACGAAGGCGTTTCAGAATGCGCTCTTCCACCTCGAC TCATTCGCGAAGAAGGGCGGGGCGCAGCTGTTCGTGCCTGCTGGGAGGTGGTTGACTGGG AGTTTTAGCCTGATCAGCCATCTCACGCTATCGCTGGACAAGGACGCAGTGATTCTTGGA TCACCAGACTCCTCTGACTGGCCAGTGATTGATGCTCTTCCATCTTATGGGCGCGGTAGA GAACTCCCCGGCAAAAGACATCAAAGTCTAATATTTGGATCCAATCTTACCGATGTGATA ATAACCGGTGCCAATGGCACCGTCGATGGCCAGGGTGCGGTTTGGTGGGACTGGTTTCAC AACCACACATTGAACTATACTAGACCACCGCTCGTTGAGTTGATGTACTCTACCAGAGTT GTTATTTCCAACCTGACCTTCATAAATTCGCCGTTCTGGAATATCCATCCTGTGTACTGC AGCCAGGTTTTGGTCCAGCATCTCACAATCCTAGCACCTATCAGTTCACCAAACACCGAC GGCATCGATCCAGACTCGTCCACAAACGTCTGCATCGAAGACTGCTACGTCAGAAACGGC GACGACATTATCGTCATCAAGAGCGGGTGGGACGAGTACGGCATCTCCTTCGCCCACCCC AGCTCCAACATCAGCATCCGCAACATCACAGGACAGACGAGGAACAGCGCCGGGCTCGCC TTTGGAAGCGAGATGTCAGGCGGCATATCGGACGTCCGAGCGGAGGGTGTCCGGATCGTC AACTCGGTGCACGGTATCCGCATCAAGACGGCCCCAGGGCGTGGAGGGTACGTGAAGAAC GTGTATGTAGCTGACGTCAGCTTCGACAACGTTTCCATAGCCATCAGGATCACTGGAAAC TATGGTGAACACCCTGACGATGGCTACGACAGGAACGCGCTTCCCACCATAAGCAACATA ACCATCAAGGATGTCGTGGGTGTCAACATTGGTGTTGCAGGAATGCTGCAGGGCATTCCG GGGGATAGCTTCAGTGGCATCTGCTTGTCAAATGTTTCTCTAAGTGTCAGGTCTACTGAT CCATGGAATTGTTCACTTGTCGAAGGGTATTCGAGCTCTGTGTCACCTGAGGTGTGTGAG CAACTGAGAGCCACTCCTGGTCCTGGGTCCGGACAGATGTGCTATGGAGGTAACTATCCG GCAGCTGCGGCACAACCGCAGCCGCCGCAGAAGTCAGGTGCTAGCCGGCTGGTTCTGGGC TGGCTTGTCCTTGTAAGATACGGGTGCCGGCATATAACTTGGTTTCTCCTCGCAAACGAA CTTCCAGGGTTATTCAACAAAGGCTAA

Peptide Sequence

PEP ID	Zm00001d019282_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:25495547:25499141:1 gene:Zm00001d019282 transcript:Zm00001d019282_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	MLNCSRKMGRSASVLQVLLVSATIVVAQTQWASGVWGMYCEDLTASVERPHRASVTDFGA VGDGATLNTKAFQNALFHLDSFAKKGGAQLFVPAGRWLTGSFSLISHLTLSLDKDAVILG SPDSSDWPVIDALPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTVDGQGAVWWDWFH NHTLNYTRPPLVELMYSTRVVISNLTFINSPFWNIHPVYCSQVLVQHLTILAPISSPNTD GIDPDSSTNVCIEDCYVRNGDDIIVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGLA FGSEMSGGISDVRAEGVRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIRITGN YGEHPDDGYDRNALPTISNITIKDVVGVNIGVAGMLQGIPGDSFSGICLSNVSLSVRSTD PWNCSLVEGYSSSVSPEVCEQLRATPGPGSGQMCYGGNYPAAAAQPQPPQKSGASRLVLG WLVLVRYGCRHITWFLLANELPGLFNKG

Transcript Sequence

Transcript ID	Zm00001d019282_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:25495547:25499141:1 gene:Zm00001d019282 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	TTTCGTTCTGGACGCTGCTTGCTTCCACAGCTCCACCGTCATCCATTGCATCGCGTAATC CTGCAGGTGCAGCTACCGGCATCCTATCGCGGCTTCGCTTCGAGACGGAAGGCTGTCCCG CGAGGTGTGGAGCCGAGAGCGGTTCGCCGTCCGAGAAGGGTTCACATCACCTCTTCCTCT GCCCCCCTCCGGTCTGTCTTCGGGGTCTCCCATTGGTGGCTGCAGTTGTTTTGATGGGAA CTCAGTAACCGCTCGAGAGGAGAGGAAAGGAGCGGATGCTCAACTGTAGCAGGAAGATGG GTAGATCCGCGAGTGTTCTTCAAGTCCTTCTGGTTTCCGCAACCATCGTTGTTGCTCAGA CGCAATGGGCTAGTGGTGTATGGGGCATGTACTGCGAGGACTTGACAGCGAGTGTAGAAA GGCCGCACAGGGCCTCGGTAACCGATTTCGGCGCCGTCGGAGATGGTGCGACTCTTAACA CGAAGGCGTTTCAGAATGCGCTCTTCCACCTCGACTCATTCGCGAAGAAGGGCGGGGCGC AGCTGTTCGTGCCTGCTGGGAGGTGGTTGACTGGGAGTTTTAGCCTGATCAGCCATCTCA CGCTATCGCTGGACAAGGACGCAGTGATTCTTGGATCACCAGACTCCTCTGACTGGCCAG TGATTGATGCTCTTCCATCTTATGGGCGCGGTAGAGAACTCCCCGGCAAAAGACATCAAA GTCTAATATTTGGATCCAATCTTACCGATGTGATAATAACCGGTGCCAATGGCACCGTCG ATGGCCAGGGTGCGGTTTGGTGGGACTGGTTTCACAACCACACATTGAACTATACTAGAC CACCGCTCGTTGAGTTGATGTACTCTACCAGAGTTGTTATTTCCAACCTGACCTTCATAA ATTCGCCGTTCTGGAATATCCATCCTGTGTACTGCAGCCAGGTTTTGGTCCAGCATCTCA CAATCCTAGCACCTATCAGTTCACCAAACACCGACGGCATCGATCCAGACTCGTCCACAA ACGTCTGCATCGAAGACTGCTACGTCAGAAACGGCGACGACATTATCGTCATCAAGAGCG GGTGGGACGAGTACGGCATCTCCTTCGCCCACCCCAGCTCCAACATCAGCATCCGCAACA TCACAGGACAGACGAGGAACAGCGCCGGGCTCGCCTTTGGAAGCGAGATGTCAGGCGGCA TATCGGACGTCCGAGCGGAGGGTGTCCGGATCGTCAACTCGGTGCACGGTATCCGCATCA AGACGGCCCCAGGGCGTGGAGGGTACGTGAAGAACGTGTATGTAGCTGACGTCAGCTTCG ACAACGTTTCCATAGCCATCAGGATCACTGGAAACTATGGTGAACACCCTGACGATGGCT ACGACAGGAACGCGCTTCCCACCATAAGCAACATAACCATCAAGGATGTCGTGGGTGTCA ACATTGGTGTTGCAGGAATGCTGCAGGGCATTCCGGGGGATAGCTTCAGTGGCATCTGCT TGTCAAATGTTTCTCTAAGTGTCAGGTCTACTGATCCATGGAATTGTTCACTTGTCGAAG GGTATTCGAGCTCTGTGTCACCTGAGGTGTGTGAGCAACTGAGAGCCACTCCTGGTCCTG GGTCCGGACAGATGTGCTATGGAGGTAACTATCCGGCAGCTGCGGCACAACCGCAGCCGC CGCAGAAGTCAGGTGCTAGCCGGCTGGTTCTGGGCTGGCTTGTCCTTGTAAGATACGGGT GCCGGCATATAACTTGGTTTCTCCTCGCAAACGAACTTCCAGGGTTATTCAACAAAGGCT AAATTGCATTACAAGACCGTGTAAAAATAATTTTGTTTTCTACCGTAAGTACCTCTGCTG CA