Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019217_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:7:22231052:22241642:-1 gene:Zm00001d019217 gene_biotype:protein_coding transcript_biotype:protein_coding description:ABC2 homolog 13
Sequence

ATGATGCAGTTTGTAGCATCTGCGCCAACTTTGTTTCCTGCAGAATATGTTGAGGAATTC
CAGAAATGCTTTGACCAAGCACCAGCTGTCCCATATGACGTGATTGAATCAATATTACGT
GAGGAGCTGCAGCGGCCATTAGATAGTGTGTATGAATACATTGATCCGGTGCCAATAGCC
TCTGCCTCAATAGCACAGGTTCATGGGGCTAGGTTGAAGAGCTCTCAGAAAGATGTGGTG
ATTAAAGTTCTAAAGCCTGGTATTGAAGATACTTTGGTTGCTGATCTGAATTTTATCTAT
GTTGTTGCACGTGTTTTAGAGTTCTTGAACCCTGAACTACAAAGGACATCACTGGTAGGC
ATTGTAAAGGATATAAAGGAATCAATGCTTGAGGAAGTTGACTTTAGAAAAGAGGCTGCA
AATATTCAGGCATTTCAGGGATACATTGATGCAATGGGGTTTGACAGGCAGGCAAAAGCC
CCATTTGTGTATCAGCACTGTAGTACAAAACGTGTATTGACTATGGAAAGATTGTATGGA
GTTCCGCTTACTGATCTTGATTCTATAAGATCTCTTGTTCCTGATCCTGAGTTGACTTTA
GTCACTGCCCTTAATGTCTGGTTTGGAAGCTTAATTTCATGTGAATCCTTCCATGCTGAT
GTACATGCTGGAAACCTATGGTTGCTCCGTGATGGGCGAATTGGTTTTATTGATTTTGGG
ATTGTTGGTCGAATATCTCCAAGAACTTGGGCAGCTATGGAGGTCTTTTTGGCTTCTTTT
GCAACTGAGGATTATGATGCTATGGCCTCTGCCCTCTCTGAAATGGGTGCTACAGGGAAT
GATATAAATACTAATGAATTTGCAAAGGACCTGCGAAAGATATTCTCATCGATACAGGAC
CTGGATACTGAAATCATAGTGGCAACAGCAAGGACCCCTGATGCTACAGCAGTATCTGCT
AATGTTGTCCTTGATGAGAGGCAGATGAATGCTCTTTTTCTTGATCTGGTCAGGGTGAGC
GAGTCTTACGGGCTGAAATTTCCTCGGGAGTTTGCTCTTCTCATGAAGCAGCTGCTGTAT
TTTGATCGCTACACAAGACTGCTGGCTCCCAGCATGAACATGCTGCGAGACGAGAGGATC
AACATCTCCACCAATCGACAACCAAGAAGAACTGATAGATTTCAGTGA

Peptide Sequence

PEP ID

Zm00001d019217_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:7:22231052:22241642:-1 gene:Zm00001d019217 transcript:Zm00001d019217_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:ABC2 homolog 13
Sequence

MMQFVASAPTLFPAEYVEEFQKCFDQAPAVPYDVIESILREELQRPLDSVYEYIDPVPIA
SASIAQVHGARLKSSQKDVVIKVLKPGIEDTLVADLNFIYVVARVLEFLNPELQRTSLVG
IVKDIKESMLEEVDFRKEAANIQAFQGYIDAMGFDRQAKAPFVYQHCSTKRVLTMERLYG
VPLTDLDSIRSLVPDPELTLVTALNVWFGSLISCESFHADVHAGNLWLLRDGRIGFIDFG
IVGRISPRTWAAMEVFLASFATEDYDAMASALSEMGATGNDINTNEFAKDLRKIFSSIQD
LDTEIIVATARTPDATAVSANVVLDERQMNALFLDLVRVSESYGLKFPREFALLMKQLLY
FDRYTRLLAPSMNMLRDERINISTNRQPRRTDRFQ

Transcript Sequence

Transcript ID

Zm00001d019217_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:22231052:22241642:-1 gene:Zm00001d019217 gene_biotype:protein_coding transcript_biotype:protein_coding description:ABC2 homolog 13
Sequence

ACGCAGAGACGTGTCATCTTCTCCTCCGTTACGAACCCGTGGGATCTCAAGTCCGTTTCA
CACTTGGCTCCCTCGCTCGCTCGCTCGCTCGCACTGACAACCTGGGTGGCCGGCTGGCCG
CCACCGCACACCTCTGCTGTGGTCTACCGCCCCTCTTCGCTCCCGCTCCCGTCGTCGGTG
AGCCGCGCCCGTCCACCCTCTCACCGATGGCTTCGGCGGCCGCGAGGGGCGCCGCGGTGC
GCTCCCCTCTCCTCGTCCACCACCGCGTCCCCCTGGTACATCCCAGCGGGGGAGGCTCGC
TCCGGGTCGGCTGGCCCGGAATTGGGCCCGGACGGGAGGGGCGGCGGCGGGGCGCCCCGG
TTGGGGCTAGGGTTTTCGCGCGCTACTCCCAGGCCCAGGACTTCTCCACACGCCTCCAAG
ATAGAGCTGGTGAGCTGCCTAAGTTAGTCGAGGACCTTATCCAGACATCGATTAGCACAG
GGCCTCGAGGTGCTTTCAGGATGGCCCAAGGGATCCAAGCTGTGCTTGGGGTTGGTGGGG
AGTGGCTGAATGACCTCTCAAAGACAGCCAACACATCAGCAGGAATTCCATCTCAGATGC
AGCTTGGTTTGCTTTCTCCACTTTACCTTCGAAGGCTTTTTGAGCGCATGGGTGCCACTT
ATATCAAGTTAGGCCAGGTGAGACATGTTCAGACTTTGTACTATGATTGATGCCAAATCT
ATGATACACTAGTAGCCCATAAAAATCTTTTCCTTATCAATGGGATTTAAGTTGAATTAT
TGACATTTTTTTGTTGTAGTAGTCATGTTTACATGGAAAGAAAGATCCCCTAATTAATTC
TGAAAAATCATGATGCAAATTAGCATGCTCGTATGCTCACTACCTGTGTTGAGTTTCAAA
GGGTAGCACATTTCAGACAAGCAACATGTTACCTTTTCTTGGTTGGTCTTTTGAGGTGGG
TATGAGATTGAGTCTGAGAAACTTTCTGATCCAATGATGGTGTACCATTTCTGCTACTTC
TTTAAAAATGATGTTGCAAATTATGATCGTTTGGGCACTGATAGCCAACCAACTGTGTGA
TGATGCAGTTTGTAGCATCTGCGCCAACTTTGTTTCCTGCAGAATATGTTGAGGAATTCC
AGAAATGCTTTGACCAAGCACCAGCTGTCCCATATGACGTGATTGAATCAATATTACGTG
AGGAGCTGCAGCGGCCATTAGATAGTGTGTATGAATACATTGATCCGGTGCCAATAGCCT
CTGCCTCAATAGCACAGGTTCATGGGGCTAGGTTGAAGAGCTCTCAGAAAGATGTGGTGA
TTAAAGTTCTAAAGCCTGGTATTGAAGATACTTTGGTTGCTGATCTGAATTTTATCTATG
TTGTTGCACGTGTTTTAGAGTTCTTGAACCCTGAACTACAAAGGACATCACTGGTAGGCA
TTGTAAAGGATATAAAGGAATCAATGCTTGAGGAAGTTGACTTTAGAAAAGAGGCTGCAA
ATATTCAGGCATTTCAGGGATACATTGATGCAATGGGGTTTGACAGGCAGGCAAAAGCCC
CATTTGTGTATCAGCACTGTAGTACAAAACGTGTATTGACTATGGAAAGATTGTATGGAG
TTCCGCTTACTGATCTTGATTCTATAAGATCTCTTGTTCCTGATCCTGAGTTGACTTTAG
TCACTGCCCTTAATGTCTGGTTTGGAAGCTTAATTTCATGTGAATCCTTCCATGCTGATG
TACATGCTGGAAACCTATGGTTGCTCCGTGATGGGCGAATTGGTTTTATTGATTTTGGGA
TTGTTGGTCGAATATCTCCAAGAACTTGGGCAGCTATGGAGGTCTTTTTGGCTTCTTTTG
CAACTGAGGATTATGATGCTATGGCCTCTGCCCTCTCTGAAATGGGTGCTACAGGGAATG
ATATAAATACTAATGAATTTGCAAAGGACCTGCGAAAGATATTCTCATCGATACAGGACC
TGGATACTGAAATCATAGTGGCAACAGCAAGGACCCCTGATGCTACAGCAGTATCTGCTA
ATGTTGTCCTTGATGAGAGGCAGATGAATGCTCTTTTTCTTGATCTGGTCAGGGTGAGCG
AGTCTTACGGGCTGAAATTTCCTCGGGAGTTTGCTCTTCTCATGAAGCAGCTGCTGTATT
TTGATCGCTACACAAGACTGCTGGCTCCCAGCATGAACATGCTGCGAGACGAGAGGATCA
ACATCTCCACCAATCGACAACCAAGAAGAACTGATAGATTTCAGTGAAGCCACGTCGTTA
GTCACCGGCCACGTACTAGAGGAGTCGTGATGGGCGATAATAGCAAGCTCATGTGACCCA
ATACTGTATATAGTTTTGCCAGACCAGCATAGAAATGAACCACACGCTAGAAATTGTACA
CTCCGTCGTATTCTGGGATTGAGCGTTATATCGTACTAGTAGGTAACATGTAAAGGCTGT
ATCCCACGACCAAAGTAAATTTCAGATGAACTGCTTTTGT