Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019195_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:21140414:21142984:1 gene:Zm00001d019195 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH3
Sequence	ATGGCTCAGCAAATGGCTTCAGTTCATTTGAATGATACAACAGTTGTTGATGCCAAGCCC TTGCGTACATTGACTCCCATGTTCCCTGCACCACTAGGGCTTCACACGTTCACTCCTCAG AACTCACCTTCAGTTGTTTGTGTGACCCCATTTGGACCATATGGTGGAGGGACTGAATTG GGGATGCCTGCTGTTCCACCAATGTTTGCAGCGCCTGTACCTGCTGCAGGAGCAGAACCC AGCCAGAGACAGCCGCATACAGCTAATATGAACGGAGGAGACACTGAATTGGGGATGCCT GCTGTTCCACCAATGTTTGCAGCGCCTGCACCTGCTGCAGGAGCAGAACCCAACCAGGGA CAGCCACATACAGCTAATATGAACGGAACTGCAGTCAACAGTTCGGTCACATCTTTGCAA ACTCCTTCAGCTGCCACACAGGAATCTGGTAAGAGGAAGAGGGGCAGGCCAAAGCGTGTG CCTGATACTACTGTTTCTTCGGCTCCTTCAGCTCCTCTGGCTCCTACTATTTCTCCAGTT CCTTCACTTCCTGTGGTTACTCCAGTTCCTTCAGCTCCTCAGGAATTGAACACTATTGTT TCCCTGACGCCTTCTTCAGACGCCCCACAAGAATCTGGCAAGAGGAAGAGGGGACGGCCC AAACGTATACAAGACGTTCCTGTAATGGTTCCTCTGACCTCGCAAGGAGATAGCACATCT GTTATTCAGACACTTCCAGGGTCCAGTGTACATGAATCTGGTACGAGAAGGGGACGTCCC AAACGTTTGCAGGATAGTTCAGATATTGTCACTCCAATTGACTCAAAAGATAGTGAGTCC TCTCCCCAGCCACCTATTGCCGCACCTGCCGAAAGTGGTAAGAGGAAGAGGGGACGTCCA AAGCGCATTGATGGTTCCGTGACTCCTTCAAGTCATTCTGTTTTTTCAATAGATGATGAT GCTGTTGACACGATGAAACGTGGACGACCTAGGAAAATTGATACCAAACTGTTACAGTTT CCATCTTTATTTTCAGATGATCCTAGACAAACTGCAGATAATGTACTCATGATGTTTGAC GCCCTGCGACGCAGACTTATGCAGATGGATGATGTGAAACAAGCTGCAAAGCAGCAGCCT AACTTGAAAGCTGGGAGCATCATGAACAATGCTGAACTTCGTGTCAATAAGGACAAGAGG ATAGGAGAGGTTCCAGGTGTTGAGGTTGGTGATATGTTCTACTTCAGAATTGAGATGTGC TTAGTGGGGTTGAATAGTCAGAGCATGGCAGGGATAGATTACATGTCTGCCAAGTTCGGT AATGAGGAGGACCCTGTAGCTATTAGTGTTGTGTCAGCTGGTGTATATGATAACACTGGA GATGATCCAGATGTTCTAGTTTATACTGGACATGGCATGTCGGGTAAGGATGACCAAAAA CTTGAGAGGGGTAATCTTGCACTAGAGAGGAGTTTGCATAGAGGTAATCCAATCAGAGTC ATTCGTAGCGTAAAAGACTTGACTTGTCCAACTGGCAAGATTTACATATATGATGGTCTT TACAAGATCAAAGAAGCCTGGGTAGAGAAAGGGAAATCTGGTTTCAATGTGTTTAAACAC AAGTTGCTTAGGGAACCTGGCCAACCTGATGGCATTGCAGTGTGGAAGAAGACTGAAAAA TGGAGGGAAAATCCATCATCTAGAGACCATGTTATATTACTTGACATATCATATGGTGTG GAAAATAACCCTGTCTGCCTTGTAAATGAGGTTGACGATGAAAAGGGCCCTAGCCGCTTC ACTTATACAACTAATTTGACATATGGGAATTCTCTCAGCTCGATGAGAAAGATGCAAGGT TGCAAATGCATAAGTGTATGCCTCCCTGGTGATAACAACTGCTCCTGTACGCATCGAAAT GCTGGTGACCTTCCTTACAGTGCTTCAGGCATACTTGTTAGCCGAATGCCCGTTTTATAC GAGTGTGGTGATTCCTGCACATGTTCACAAAATTGCCGGAACCGAGTTGTACAGAAAGGT ACGCAGATCCGTTTTGAAGTTTTTAAGACAGGAGATCGTGGTTGGGGCCTCCGTAGTTGG GATCCAATTCGAGCAGGCACATTTATCTGTGAATATGCAGGTGAAATCATTGACATAAAT AGAGTGAATGGTGAAGATGACTACATATTTGAGACTTCTCCTTTAGAGCAGAATTTAAGA TGGAACTATGCACCGGAATTGCTGGGTGAGCCTAGTCTTTCTGACTCAAATGAAACACCA AAGCAGCTGCCTATAGTCATCAGTGCAAAACGAACCGGCAACATAGCTCGCTTTATGAAC CACAGCTGCTCACCTAATGTGTTTTGGCAACCAGTTCTGTATGATCATGGTGATGAGGGA TATCCACATATTGCATTCTTTGCAATTAAGCATATTCCTCCAATGACAGAGCTTACCTAT GATTATGGTCAGAACCAGCGTAATAGTATTCAAATGGGAACCCATTCTGGTTTTCGGAAG TCTAAAAGTTGCTTATGTTGGTCCCCGAAGTGTAGAGGTTCCTTTGGCTAA

Peptide Sequence

PEP ID	Zm00001d019195_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:21140414:21142984:1 gene:Zm00001d019195 transcript:Zm00001d019195_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH3
Sequence	MAQQMASVHLNDTTVVDAKPLRTLTPMFPAPLGLHTFTPQNSPSVVCVTPFGPYGGGTEL GMPAVPPMFAAPVPAAGAEPSQRQPHTANMNGGDTELGMPAVPPMFAAPAPAAGAEPNQG QPHTANMNGTAVNSSVTSLQTPSAATQESGKRKRGRPKRVPDTTVSSAPSAPLAPTISPV PSLPVVTPVPSAPQELNTIVSLTPSSDAPQESGKRKRGRPKRIQDVPVMVPLTSQGDSTS VIQTLPGSSVHESGTRRGRPKRLQDSSDIVTPIDSKDSESSPQPPIAAPAESGKRKRGRP KRIDGSVTPSSHSVFSIDDDAVDTMKRGRPRKIDTKLLQFPSLFSDDPRQTADNVLMMFD ALRRRLMQMDDVKQAAKQQPNLKAGSIMNNAELRVNKDKRIGEVPGVEVGDMFYFRIEMC LVGLNSQSMAGIDYMSAKFGNEEDPVAISVVSAGVYDNTGDDPDVLVYTGHGMSGKDDQK LERGNLALERSLHRGNPIRVIRSVKDLTCPTGKIYIYDGLYKIKEAWVEKGKSGFNVFKH KLLREPGQPDGIAVWKKTEKWRENPSSRDHVILLDISYGVENNPVCLVNEVDDEKGPSRF TYTTNLTYGNSLSSMRKMQGCKCISVCLPGDNNCSCTHRNAGDLPYSASGILVSRMPVLY ECGDSCTCSQNCRNRVVQKGTQIRFEVFKTGDRGWGLRSWDPIRAGTFICEYAGEIIDIN RVNGEDDYIFETSPLEQNLRWNYAPELLGEPSLSDSNETPKQLPIVISAKRTGNIARFMN HSCSPNVFWQPVLYDHGDEGYPHIAFFAIKHIPPMTELTYDYGQNQRNSIQMGTHSGFRK SKSCLCWSPKCRGSFG

Transcript Sequence

Transcript ID	Zm00001d019195_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:21140414:21142984:1 gene:Zm00001d019195 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH3
Sequence	ATGGCTCAGCAAATGGCTTCAGTTCATTTGAATGATACAACAGTTGTTGATGCCAAGCCC TTGCGTACATTGACTCCCATGTTCCCTGCACCACTAGGGCTTCACACGTTCACTCCTCAG AACTCACCTTCAGTTGTTTGTGTGACCCCATTTGGACCATATGGTGGAGGGACTGAATTG GGGATGCCTGCTGTTCCACCAATGTTTGCAGCGCCTGTACCTGCTGCAGGAGCAGAACCC AGCCAGAGACAGCCGCATACAGCTAATATGAACGGAGGAGACACTGAATTGGGGATGCCT GCTGTTCCACCAATGTTTGCAGCGCCTGCACCTGCTGCAGGAGCAGAACCCAACCAGGGA CAGCCACATACAGCTAATATGAACGGAACTGCAGTCAACAGTTCGGTCACATCTTTGCAA ACTCCTTCAGCTGCCACACAGGAATCTGGTAAGAGGAAGAGGGGCAGGCCAAAGCGTGTG CCTGATACTACTGTTTCTTCGGCTCCTTCAGCTCCTCTGGCTCCTACTATTTCTCCAGTT CCTTCACTTCCTGTGGTTACTCCAGTTCCTTCAGCTCCTCAGGAATTGAACACTATTGTT TCCCTGACGCCTTCTTCAGACGCCCCACAAGAATCTGGCAAGAGGAAGAGGGGACGGCCC AAACGTATACAAGACGTTCCTGTAATGGTTCCTCTGACCTCGCAAGGAGATAGCACATCT GTTATTCAGACACTTCCAGGGTCCAGTGTACATGAATCTGGTACGAGAAGGGGACGTCCC AAACGTTTGCAGGATAGTTCAGATATTGTCACTCCAATTGACTCAAAAGATAGTGAGTCC TCTCCCCAGCCACCTATTGCCGCACCTGCCGAAAGTGGTAAGAGGAAGAGGGGACGTCCA AAGCGCATTGATGGTTCCGTGACTCCTTCAAGTCATTCTGTTTTTTCAATAGATGATGAT GCTGTTGACACGATGAAACGTGGACGACCTAGGAAAATTGATACCAAACTGTTACAGTTT CCATCTTTATTTTCAGATGATCCTAGACAAACTGCAGATAATGTACTCATGATGTTTGAC GCCCTGCGACGCAGACTTATGCAGATGGATGATGTGAAACAAGCTGCAAAGCAGCAGCCT AACTTGAAAGCTGGGAGCATCATGAACAATGCTGAACTTCGTGTCAATAAGGACAAGAGG ATAGGAGAGGTTCCAGGTGTTGAGGTTGGTGATATGTTCTACTTCAGAATTGAGATGTGC TTAGTGGGGTTGAATAGTCAGAGCATGGCAGGGATAGATTACATGTCTGCCAAGTTCGGT AATGAGGAGGACCCTGTAGCTATTAGTGTTGTGTCAGCTGGTGTATATGATAACACTGGA GATGATCCAGATGTTCTAGTTTATACTGGACATGGCATGTCGGGTAAGGATGACCAAAAA CTTGAGAGGGGTAATCTTGCACTAGAGAGGAGTTTGCATAGAGGTAATCCAATCAGAGTC ATTCGTAGCGTAAAAGACTTGACTTGTCCAACTGGCAAGATTTACATATATGATGGTCTT TACAAGATCAAAGAAGCCTGGGTAGAGAAAGGGAAATCTGGTTTCAATGTGTTTAAACAC AAGTTGCTTAGGGAACCTGGCCAACCTGATGGCATTGCAGTGTGGAAGAAGACTGAAAAA TGGAGGGAAAATCCATCATCTAGAGACCATGTTATATTACTTGACATATCATATGGTGTG GAAAATAACCCTGTCTGCCTTGTAAATGAGGTTGACGATGAAAAGGGCCCTAGCCGCTTC ACTTATACAACTAATTTGACATATGGGAATTCTCTCAGCTCGATGAGAAAGATGCAAGGT TGCAAATGCATAAGTGTATGCCTCCCTGGTGATAACAACTGCTCCTGTACGCATCGAAAT GCTGGTGACCTTCCTTACAGTGCTTCAGGCATACTTGTTAGCCGAATGCCCGTTTTATAC GAGTGTGGTGATTCCTGCACATGTTCACAAAATTGCCGGAACCGAGTTGTACAGAAAGGT ACGCAGATCCGTTTTGAAGTTTTTAAGACAGGAGATCGTGGTTGGGGCCTCCGTAGTTGG GATCCAATTCGAGCAGGCACATTTATCTGTGAATATGCAGGTGAAATCATTGACATAAAT AGAGTGAATGGTGAAGATGACTACATATTTGAGACTTCTCCTTTAGAGCAGAATTTAAGA TGGAACTATGCACCGGAATTGCTGGGTGAGCCTAGTCTTTCTGACTCAAATGAAACACCA AAGCAGCTGCCTATAGTCATCAGTGCAAAACGAACCGGCAACATAGCTCGCTTTATGAAC CACAGCTGCTCACCTAATGTGTTTTGGCAACCAGTTCTGTATGATCATGGTGATGAGGGA TATCCACATATTGCATTCTTTGCAATTAAGCATATTCCTCCAATGACAGAGCTTACCTAT GATTATGGTCAGAACCAGCGTAATAGTATTCAAATGGGAACCCATTCTGGTTTTCGGAAG TCTAAAAGTTGCTTATGTTGGTCCCCGAAGTGTAGAGGTTCCTTTGGCTAA