Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019185_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:7:20696499:20703431:1 gene:Zm00001d019185 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGTTGAAGACTGTTTCTGTGAGATTGTCGCGAGATGACAGTCTCCGGCCATGCCAAGCA CTGCTGTCTCGGTATTCAGAAACTGTTGTCCCTTTGATTCGGAGGTTTTGCTCGACGCCC ATTAAGGTTGAGGAGGTCGCCAACATCGAAGCTGATGGAAAGGTCTCATATCTGGATGCC GCTGCTCTGCCCTGCGACAACTCTGACTGTCGTGGTGAGCCCAGTCATGGCAGCAGGCCA TGGACGAAACGGTTGAAGCATTATGGACCTTCTCAGAAGGGAAACCGTAACCATCATGAA ACGAAACTGCCAGGCAGTGGCAGGGATGGATCTTCTAGGAAGGGCAGCCACCCTCAGAAG GGTAAAACGAAACTGCCAGGCAGTGGGAGGGATGGATCTTCTCGGAAAGGTAGCCACCAT GAAACAAAATTGGCAGACAGGGATGAACTTATTCAGAAGGGAAGTCATCATGAAAAGGAA TTGGCAGACACACCCTTCAAACCTTTTCTTTTCCAGATTGTATTGGATACTTCTATGAGT TCTCTTATGCCTGTACTTGACGGATGGGTGAAAATCGGTAATCGTCTGGAAAGAGATAAA GTCAATATGGTTTTGTTCCATCTGAGGAAGCAGAGAATGTATAACAAGGCTCTGAAGTTT GTGGAGTGGATCGAAAGAAGAAAACTATTAAATTTTGAAGAACGTGATTATGCTAGCCAT CTGGATTTGATAGCACGGAACTATGGTGTTGAAGCTGCCCAAAAGTACATCGAGAGGGTC CCAGAAGCCTTCAGGAGTGAGGTGCTTTATGAAACTCTGCTTGTTAACTGTGTATGCCGT GATGATGCCCAGAAGGCAGAGCAAGTCTTCAATGAAATAAGGGAACTCTCTTTGCCTTTA ACTATCTCTGCTTGCAACCAAATGTTATTGCTGTACAAGAGGGTTTCTCGAAATAAGGTG GTTGACATTCTCACATTGATGGAAAAGGAAAATATAAAGTATTCTATATTCACCTACAAG CTCATGATTGACTTAAAAGTGCGATCAAATGACATATTAGGCATGGAACAAGTCTTAAAT TCTATGAAAGAAAATGGTCTTGAGCCAAATTTTACCATCCAGACTATGGTTGCTAAATTC TACATATCTGGGTGCTTTACAGAGAAAGCAGAAGAGGTTATCAATGCTATGGAGGTACAT GTAAAGGCTAATCGTCATGCCGTCAGGTCTCTTCTTGACCTCTATGCTATTCTTGGAAGG CCAGTTGATGTAGAGAGAGTATGGAACTTGTGCGCTGAACCAAAGTTGGAGGACTTTTTG GCTGCAATTAAGGCATGGAGTAAACTTGGACATATCGAAAGAGCGGAAGAGATCTTTGAC GTGTTGGTAAAGACGTTTCCGAAACTCACTTCCAAGTACTTTAATGCTATGTTGGAGGTG TATGCGGAAAATAAACTTCTGGACAAAAGCAAAAAGTTTATAGAAAGGATGTGTTTGGAT GGGTGTACAATCGGCCCTCTTACCTGGGATGCAGTTGTCAAGCTTTATGTGAATTTAGGC GAGTTGTCAAAGGCCGACTCGTTTCTGATGAATGTCACAGAAGATAATCCTGACAGACAT CCCCTTTTCAGCTCATATGTAATCTTACTAAAGGCATACGCAGAAAAGGGCGATATCCAT AACGCGGAGAAGATATTTGATAGGGTAAAGCAGACCAACTTCCCTGCAAGAACTCTGCCC TATAATTTGTTACTTGCAGCTTATGCCAGTGCCCAGGTTACACCCTATGGGTTCAGAGAG AGGATGAAAGCTGACAAGTTCAGCCCGGGCAAGAGTCAGATCGAACAACTGAAGCAACTC GACAGCTTGTAG

Peptide Sequence

PEP ID	Zm00001d019185_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:7:20696499:20703431:1 gene:Zm00001d019185 transcript:Zm00001d019185_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MLKTVSVRLSRDDSLRPCQALLSRYSETVVPLIRRFCSTPIKVEEVANIEADGKVSYLDA AALPCDNSDCRGEPSHGSRPWTKRLKHYGPSQKGNRNHHETKLPGSGRDGSSRKGSHPQK GKTKLPGSGRDGSSRKGSHHETKLADRDELIQKGSHHEKELADTPFKPFLFQIVLDTSMS SLMPVLDGWVKIGNRLERDKVNMVLFHLRKQRMYNKALKFVEWIERRKLLNFEERDYASH LDLIARNYGVEAAQKYIERVPEAFRSEVLYETLLVNCVCRDDAQKAEQVFNEIRELSLPL TISACNQMLLLYKRVSRNKVVDILTLMEKENIKYSIFTYKLMIDLKVRSNDILGMEQVLN SMKENGLEPNFTIQTMVAKFYISGCFTEKAEEVINAMEVHVKANRHAVRSLLDLYAILGR PVDVERVWNLCAEPKLEDFLAAIKAWSKLGHIERAEEIFDVLVKTFPKLTSKYFNAMLEV YAENKLLDKSKKFIERMCLDGCTIGPLTWDAVVKLYVNLGELSKADSFLMNVTEDNPDRH PLFSSYVILLKAYAEKGDIHNAEKIFDRVKQTNFPARTLPYNLLLAAYASAQVTPYGFRE RMKADKFSPGKSQIEQLKQLDSL

Transcript Sequence

Transcript ID	Zm00001d019185_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:20696499:20703431:1 gene:Zm00001d019185 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	GGTGGTCCAGAACGCTAAAACCCTAGCAGGAAGAAAAGAACTCCCCTTTCTTGCTTCGTG TTCCACTTCCACCCGCGCCTTCCTCCGGCAAGTAGAGAACCCATACAAGCCCCCGTATTG TCGCATAGTCATCCTGCGGCGTCGCCCTCCTCCTTTCCCACTCCCACCGGTACGTATTCG CGGAGTGGCGGTCCTTCTGGACCGGATCGATTTCGTAGCTTGCTCCGGCGGCGGATTGTT CTGCCAAATCTGATGCTTAACATTAAGTTAGCTGGGGATTTGTTTCTTGCCCGGTAACCT GTTACTCGTAATATAATTTGAATCTTCAATCGGTGCTTCGACTAGATCATTCTGCCCAAG GTGCTCGATCCCCAGACCAGCGATAGGGAATGTTGAAGACTGTTTCTGTGAGATTGTCGC GAGATGACAGTCTCCGGCCATGCCAAGCACTGCTGTCTCGGTATTCAGAAACTGTTGTCC CTTTGATTCGGAGGTTTTGCTCGACGCCCATTAAGGTTGAGGAGGTCGCCAACATCGAAG CTGATGGAAAGGTCTCATATCTGGATGCCGCTGCTCTGCCCTGCGACAACTCTGACTGTC GTGGTGAGCCCAGTCATGGCAGCAGGCCATGGACGAAACGGTTGAAGCATTATGGACCTT CTCAGAAGGGAAACCGTAACCATCATGAAACGAAACTGCCAGGCAGTGGCAGGGATGGAT CTTCTAGGAAGGGCAGCCACCCTCAGAAGGGTAAAACGAAACTGCCAGGCAGTGGGAGGG ATGGATCTTCTCGGAAAGGTAGCCACCATGAAACAAAATTGGCAGACAGGGATGAACTTA TTCAGAAGGGAAGTCATCATGAAAAGGAATTGGCAGACACACCCTTCAAACCTTTTCTTT TCCAGATTGTATTGGATACTTCTATGAGTTCTCTTATGCCTGTACTTGACGGATGGGTGA AAATCGGTAATCGTCTGGAAAGAGATAAAGTCAATATGGTTTTGTTCCATCTGAGGAAGC AGAGAATGTATAACAAGGCTCTGAAGTTTGTGGAGTGGATCGAAAGAAGAAAACTATTAA ATTTTGAAGAACGTGATTATGCTAGCCATCTGGATTTGATAGCACGGAACTATGGTGTTG AAGCTGCCCAAAAGTACATCGAGAGGGTCCCAGAAGCCTTCAGGAGTGAGGTGCTTTATG AAACTCTGCTTGTTAACTGTGTATGCCGTGATGATGCCCAGAAGGCAGAGCAAGTCTTCA ATGAAATAAGGGAACTCTCTTTGCCTTTAACTATCTCTGCTTGCAACCAAATGTTATTGC TGTACAAGAGGGTTTCTCGAAATAAGGTGGTTGACATTCTCACATTGATGGAAAAGGAAA ATATAAAGTATTCTATATTCACCTACAAGCTCATGATTGACTTAAAAGTGCGATCAAATG ACATATTAGGCATGGAACAAGTCTTAAATTCTATGAAAGAAAATGGTCTTGAGCCAAATT TTACCATCCAGACTATGGTTGCTAAATTCTACATATCTGGGTGCTTTACAGAGAAAGCAG AAGAGGTTATCAATGCTATGGAGGTACATGTAAAGGCTAATCGTCATGCCGTCAGGTCTC TTCTTGACCTCTATGCTATTCTTGGAAGGCCAGTTGATGTAGAGAGAGTATGGAACTTGT GCGCTGAACCAAAGTTGGAGGACTTTTTGGCTGCAATTAAGGCATGGAGTAAACTTGGAC ATATCGAAAGAGCGGAAGAGATCTTTGACGTGTTGGTAAAGACGTTTCCGAAACTCACTT CCAAGTACTTTAATGCTATGTTGGAGGTGTATGCGGAAAATAAACTTCTGGACAAAAGCA AAAAGTTTATAGAAAGGATGTGTTTGGATGGGTGTACAATCGGCCCTCTTACCTGGGATG CAGTTGTCAAGCTTTATGTGAATTTAGGCGAGTTGTCAAAGGCCGACTCGTTTCTGATGA ATGTCACAGAAGATAATCCTGACAGACATCCCCTTTTCAGCTCATATGTAATCTTACTAA AGGCATACGCAGAAAAGGGCGATATCCATAACGCGGAGAAGATATTTGATAGGGTAAAGC AGACCAACTTCCCTGCAAGAACTCTGCCCTATAATTTGTTACTTGCAGCTTATGCCAGTG CCCAGGTTACACCCTATGGGTTCAGAGAGAGGATGAAAGCTGACAAGTTCAGCCCGGGCA AGAGTCAGATCGAACAACTGAAGCAACTCGACAGCTTGTAGAAAGCAGGCAAATCCAGAT TGATTTTCTTCCTTTTCACCCCTTCACCGTGACCACATGGAACATTTTCCTTGCAAAGCA GTTAGACTGGAATAGAAGAATCTACCAGGATGCATTTGTTCTTTC