Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019165_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:7:19783137:19789350:-1 gene:Zm00001d019165 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oligosaccharide transferase1 description: oligosaccharide transferase1
Sequence

ATGGCCATGAGGCACAGGGCGCGGTCCTCCCCCACCTCCCCGCTCACCCCGTCCTCCAGC
GCAAGAACAAACAAGATACTTGGTTTCTCTGTATCTCTCATCCTCATCAATCTGGCTTCA
ATTATGGAGCGTGCTGATGAGAATCTCCTTCCAGCAGTTTACAAGGAAGTCAGTGCAGCC
TTCAATGCTGGTCCTGCAGATCTGGGATACCTCACCTTTGTAATGAACTTTCTGAAGTCA
ATAGCATCTCCCTTGGCAGGTATCCTTGCTCTGCACTATGATCGGCCAATAGTGCTTGCA
ATAGGGACTGTTTTCTGGGCCTTATCAACAGGGGCTGTCGGTGTTAGCCAGCGTTTTGGG
CAGGTTGCATTCTGGAGAGCCGTAAATGGCCTAGGGCTTGCCATTGTAATACCAGCGCTT
CAGTCGTTCATTGCTGATAGCTATAAAGATGGTACGCGTGGTGCAGGGTTCGGTTTGTTA
AGCCTCATTGGCGCTGTAGGTGGTATAGGTGGTAGTATTTTGGCAACAATCATGGCTGGA
AAGGACTATTGGGGATTCCCAGGATGGCGTGTTGCATTTATGATGGTCGCACTTGTCAGC
TTGATAATTGGAATTCTTGTGTACTTATATGCGACTGATCCAAGAAGAATACCTGGCAAT
CGCCTTCTTGACGAAGATGAGTATGAGAGGTTGCATCTATCAAGCAAAGATGTTCTTCCT
CCGCCTTCTATCTGGAGGGATTCTTGGGTGGCAACAAGATCTGTCATGAAAGTGAAGACG
TTTCAGATCATTGTCCTGCAAGGGATCATTGGCTCGTTGCCGTGGACTGCTATAGTTTTC
TTCACAATGTGGTTCGAACTCATTGGTTTTGACAACAACAGCTCAGCAGCACTGAACAGC
CTCTTCGCCATCGGGTGTGCCAGCGGAGCATTTATTGGCGGGGTGATAGCAGATCACCTG
TCAAAGTACTTCCCAGATTCGGCACGGGTCATGTGTGCCCAGTTTAGTGCCTTCATGGGC
ATCCCGTTTTCTTGGATCCTCCTCACAGTCATCCCCCAGTCAGTTGACTACTGGTATGCC
TTCGCCGTCACGCTTTTCTTCATGGGCATCACGATAAGCTGGTGCGCCACCTCGGCAAAC
AACCCCATGTTCGCCGAGGTGGTCCCTCCCAAGCACCGCACCATGATCTACGCCTTCGAC
CGCGCGTTCGAGGGCTCATTCGCCTCGTTGGCTGCCCCTGCCGTGGGCCTAATCACCGAG
AAGATCTATGGCTATGATACCAAGACCGTGAACCTTGCGAACGGGTCAGCGGAAGGGGCG
TACGCGCTCTCAAGGGGGCTGCTGACCATGATGATCGTGCCTTTCGGTGTGTGTGTCCTG
TTCTACAGCCCCCTGTACCTTGTGTTCAAGCACGACAGAGAGAACGCTAAATTTGCCAGC
TTCAAGGAGCAGGAGCTAGTATGA

Peptide Sequence

PEP ID

Zm00001d019165_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:7:19783137:19789350:-1 gene:Zm00001d019165 transcript:Zm00001d019165_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oligosaccharide transferase1 description: oligosaccharide transferase1
Sequence

MAMRHRARSSPTSPLTPSSSARTNKILGFSVSLILINLASIMERADENLLPAVYKEVSAA
FNAGPADLGYLTFVMNFLKSIASPLAGILALHYDRPIVLAIGTVFWALSTGAVGVSQRFG
QVAFWRAVNGLGLAIVIPALQSFIADSYKDGTRGAGFGLLSLIGAVGGIGGSILATIMAG
KDYWGFPGWRVAFMMVALVSLIIGILVYLYATDPRRIPGNRLLDEDEYERLHLSSKDVLP
PPSIWRDSWVATRSVMKVKTFQIIVLQGIIGSLPWTAIVFFTMWFELIGFDNNSSAALNS
LFAIGCASGAFIGGVIADHLSKYFPDSARVMCAQFSAFMGIPFSWILLTVIPQSVDYWYA
FAVTLFFMGITISWCATSANNPMFAEVVPPKHRTMIYAFDRAFEGSFASLAAPAVGLITE
KIYGYDTKTVNLANGSAEGAYALSRGLLTMMIVPFGVCVLFYSPLYLVFKHDRENAKFAS
FKEQELV

Transcript Sequence

Transcript ID

Zm00001d019165_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:19783137:19789350:-1 gene:Zm00001d019165 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oligosaccharide transferase1 description: oligosaccharide transferase1
Sequence

GCCCCTGCCGCGTCGTCTTCTGGACCGCTTCTCCACTCCGCCCAGCTCGCAGTCGCAGCT
CGCTCAAAGCAGCACAGCAGCAAGCAGAAGGAAGAAAAAGAGCAGCGAGAGCCGAGAAGA
GAAGCGCGCCGCCGCTCGAGCTCATCCCGCCGCCGGACACACCGCATGGCCATGAGGCAC
AGGGCGCGGTCCTCCCCCACCTCCCCGCTCACCCCGTCCTCCAGCGCAAGAACAAACAAG
ATACTTGGTTTCTCTGTATCTCTCATCCTCATCAATCTGGCTTCAATTATGGAGCGTGCT
GATGAGAATCTCCTTCCAGCAGTTTACAAGGAAGTCAGTGCAGCCTTCAATGCTGGTCCT
GCAGATCTGGGATACCTCACCTTTGTAATGAACTTTCTGAAGTCAATAGCATCTCCCTTG
GCAGGTATCCTTGCTCTGCACTATGATCGGCCAATAGTGCTTGCAATAGGGACTGTTTTC
TGGGCCTTATCAACAGGGGCTGTCGGTGTTAGCCAGCGTTTTGGGCAGGTTGCATTCTGG
AGAGCCGTAAATGGCCTAGGGCTTGCCATTGTAATACCAGCGCTTCAGTCGTTCATTGCT
GATAGCTATAAAGATGGTACGCGTGGTGCAGGGTTCGGTTTGTTAAGCCTCATTGGCGCT
GTAGGTGGTATAGGTGGTAGTATTTTGGCAACAATCATGGCTGGAAAGGACTATTGGGGA
TTCCCAGGATGGCGTGTTGCATTTATGATGGTCGCACTTGTCAGCTTGATAATTGGAATT
CTTGTGTACTTATATGCGACTGATCCAAGAAGAATACCTGGCAATCGCCTTCTTGACGAA
GATGAGTATGAGAGGTTGCATCTATCAAGCAAAGATGTTCTTCCTCCGCCTTCTATCTGG
AGGGATTCTTGGGTGGCAACAAGATCTGTCATGAAAGTGAAGACGTTTCAGATCATTGTC
CTGCAAGGGATCATTGGCTCGTTGCCGTGGACTGCTATAGTTTTCTTCACAATGTGGTTC
GAACTCATTGGTTTTGACAACAACAGCTCAGCAGCACTGAACAGCCTCTTCGCCATCGGG
TGTGCCAGCGGAGCATTTATTGGCGGGGTGATAGCAGATCACCTGTCAAAGTACTTCCCA
GATTCGGCACGGGTCATGTGTGCCCAGTTTAGTGCCTTCATGGGCATCCCGTTTTCTTGG
ATCCTCCTCACAGTCATCCCCCAGTCAGTTGACTACTGGTATGCCTTCGCCGTCACGCTT
TTCTTCATGGGCATCACGATAAGCTGGTGCGCCACCTCGGCAAACAACCCCATGTTCGCC
GAGGTGGTCCCTCCCAAGCACCGCACCATGATCTACGCCTTCGACCGCGCGTTCGAGGGC
TCATTCGCCTCGTTGGCTGCCCCTGCCGTGGGCCTAATCACCGAGAAGATCTATGGCTAT
GATACCAAGACCGTGAACCTTGCGAACGGGTCAGCGGAAGGGGCGTACGCGCTCTCAAGG
GGGCTGCTGACCATGATGATCGTGCCTTTCGGTGTGTGTGTCCTGTTCTACAGCCCCCTG
TACCTTGTGTTCAAGCACGACAGAGAGAACGCTAAATTTGCCAGCTTCAAGGAGCAGGAG
CTAGTATGATCAATGATCATACGAATGTGCTTCCTTGGTCCGCATTCATAACCTCTCGTC
ATCCCGGGCTGGAGCTTTGCGTGATGATTATGAAGATAACTGCCTTGATCGGCATTCAGA
ACATCTGGTCATACCGTCCTGGGTCATTCTGAGTTTCTTGTTGAGATTATGGCAATTGTG
CCACGGAGAGGTGTGGATCAACGTTTGTTCTGGCAGATTTTGAAGATTGTTATAAGGCGA
CCTTTTTTTTTGTGCTGATCACCTATCCAGAAAGCCATGGCTTCTCCCGACGACTGATTT
GTGTTGTTAAGGGATGATTTGCTTTTTTGCATGGCTTCTCCTGACGACTGATTTGTGTTG
TTAAGGGATGATTTGCTTTTTTGGTAATTCTTAGTCTTACAAGAGAACCCCAAGGAGAAG
CATATGATATGATCTGAACCATGCTGAATTGCTGATGTTACATGTAGTTGGAACAGATCA
CTAATAATGTTCTGATCACTGGGATCAGCTCGTTTTC