Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019148_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:7:19180395:19184560:-1 gene:Zm00001d019148 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:shugoshin centromeric cohesion1 description: shugoshin centromeric cohesion1
Sequence	ATGACCTCCACCGCTGCAGGTGCAGGAAGCGGTAGCTTGAACCCTCCGCATTCGAACCCT AGCGGCGATGGCGGCCCTAGGATCCGGTCGCCGCCGGGGAAAGGGAATAAGCCCGTCGCT CTCGCCGACATCACTAACACTGGGAAGCCCAACGCCGCCAGATCCATCACCGTCCCCGAC CTCGTTAAGGAGAACACCAAGTTGCTGACTCTGCTCAACGAGAAGACAAAGATTATTGAC CTCAGCAGGGTTGAGATATACAAGCTCCGTCTTGCCCTGCAAGCATCAAAGCAACAGAAT CTACACCTTACACAAACCAATTCGCAGATGCTTGCGGAAATAAACACAGGGAAAGATCGT ATTAAGATGCTGCAGCATGAGCTTTCTTGTACAACAGCACTGCTTAAAGTAAAGGATTCA GAGCTTGATAGAAAGAAAAACGCTGGTAATGTACAGCAGAAGGGAGTAAAATCTCAGGTC TTGAAAACCAAAGCTTCCACAGTAGCAGTAGAGGCTCACCACGTTGGTGACTCAGTAACC AGTGGTGTTGAACACCATGTGGTTGAATCTCAATCTGCCGTATCATCAAATACTGTCTGC CAGGAGCCACCACAAGATGGAAAGCAAAAGAGAATGCCTCAACGGAGAAGGTCTTCAAGA CTGAACCAAGGTTCCTGTGAGATCAGGGGAGTATCTCAGAACACACTGCATGAGAACCCT GTAGTGCCTGTAGCTCCTTCCACTTTAAGTCTTGAGAAACAGTATGGACAAACCACTGGA AAACATATGAAGTCACTGCAAAATGAGTGCAGTGCAACTGTGCATGAAGTAATAATGGCT TCAGAATTCGAGAAAACTGAGATAAATGAGCTACCACAAAAAACAGATCTGAAGGAGATA CCAGAAGCATGTTCCAGTGAAACTGAAGTTCAGTCTCATAAAATTGGTGATAAGGCCTTC AACAGTAAACAAAACCATTTGACAGGAAGCCAATCATCTTTGTCATTCAATACCGTTGAC ACCCCCGAGCCACCAGAAGACAACACTGTCAAGCGGTGCTCAAAAAAACGGTCATCCATA GAGGATGTAAATGCCAAACTAGACACGATTACCAGTGAGCCATTGCGACATGAAGAAAAG AGAAAATCTCGAAGGAAAATATCTGCAAGACTGAATTCAGTATCTTCTGAGCACACAGAT ATCGTTGTTGAGACTGAGCACAAAGATGTTATTGTTTCTTTGGCCGGTTCCACTTCAAAT GTCTCAATGGAGCAGCGGACAAATCAAGAGCAGGATGGTGATTGTTTCTCAAGGAAATCC AATGAAAATCAGATATTAGGGAGGAGGTCTCTAAGACGAGCTGCTGAAAAGGTCGTCTCT TACAAGGAGATGCCCTTGAATGTTAAGATGCGACGACCTTAA

Peptide Sequence

PEP ID	Zm00001d019148_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:7:19180395:19184560:-1 gene:Zm00001d019148 transcript:Zm00001d019148_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:shugoshin centromeric cohesion1 description: shugoshin centromeric cohesion1
Sequence	MTSTAAGAGSGSLNPPHSNPSGDGGPRIRSPPGKGNKPVALADITNTGKPNAARSITVPD LVKENTKLLTLLNEKTKIIDLSRVEIYKLRLALQASKQQNLHLTQTNSQMLAEINTGKDR IKMLQHELSCTTALLKVKDSELDRKKNAGNVQQKGVKSQVLKTKASTVAVEAHHVGDSVT SGVEHHVVESQSAVSSNTVCQEPPQDGKQKRMPQRRRSSRLNQGSCEIRGVSQNTLHENP VVPVAPSTLSLEKQYGQTTGKHMKSLQNECSATVHEVIMASEFEKTEINELPQKTDLKEI PEACSSETEVQSHKIGDKAFNSKQNHLTGSQSSLSFNTVDTPEPPEDNTVKRCSKKRSSI EDVNAKLDTITSEPLRHEEKRKSRRKISARLNSVSSEHTDIVVETEHKDVIVSLAGSTSN VSMEQRTNQEQDGDCFSRKSNENQILGRRSLRRAAEKVVSYKEMPLNVKMRRP

Transcript Sequence

Transcript ID	Zm00001d019148_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:19180395:19184560:-1 gene:Zm00001d019148 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:shugoshin centromeric cohesion1 description: shugoshin centromeric cohesion1
Sequence	CCCCTAACATTCCAGCTCCCGCGCCGCTCTACCGTCGTCGCTTGAGCTCTCTCGCTGGCG GACCGCCCCCCTCATCCCTGCGGTCACGCGCGACCTCCATGACCTCCACCGCTGCAGGTG CAGGAAGCGGTAGCTTGAACCCTCCGCATTCGAACCCTAGCGGCGATGGCGGCCCTAGGA TCCGGTCGCCGCCGGGGAAAGGGAATAAGCCCGTCGCTCTCGCCGACATCACTAACACTG GGAAGCCCAACGCCGCCAGATCCATCACCGTCCCCGACCTCGTTAAGGAGAACACCAAGT TGCTGACTCTGCTCAACGAGAAGACAAAGATTATTGACCTCAGCAGGGTTGAGATATACA AGCTCCGTCTTGCCCTGCAAGCATCAAAGCAACAGAATCTACACCTTACACAAACCAATT CGCAGATGCTTGCGGAAATAAACACAGGGAAAGATCGTATTAAGATGCTGCAGCATGAGC TTTCTTGTACAACAGCACTGCTTAAAGTAAAGGATTCAGAGCTTGATAGAAAGAAAAACG CTGGTAATGTACAGCAGAAGGGAGTAAAATCTCAGGTCTTGAAAACCAAAGCTTCCACAG TAGCAGTAGAGGCTCACCACGTTGGTGACTCAGTAACCAGTGGTGTTGAACACCATGTGG TTGAATCTCAATCTGCCGTATCATCAAATACTGTCTGCCAGGAGCCACCACAAGATGGAA AGCAAAAGAGAATGCCTCAACGGAGAAGGTCTTCAAGACTGAACCAAGGTTCCTGTGAGA TCAGGGGAGTATCTCAGAACACACTGCATGAGAACCCTGTAGTGCCTGTAGCTCCTTCCA CTTTAAGTCTTGAGAAACAGTATGGACAAACCACTGGAAAACATATGAAGTCACTGCAAA ATGAGTGCAGTGCAACTGTGCATGAAGTAATAATGGCTTCAGAATTCGAGAAAACTGAGA TAAATGAGCTACCACAAAAAACAGATCTGAAGGAGATACCAGAAGCATGTTCCAGTGAAA CTGAAGTTCAGTCTCATAAAATTGGTGATAAGGCCTTCAACAGTAAACAAAACCATTTGA CAGGAAGCCAATCATCTTTGTCATTCAATACCGTTGACACCCCCGAGCCACCAGAAGACA ACACTGTCAAGCGGTGCTCAAAAAAACGGTCATCCATAGAGGATGTAAATGCCAAACTAG ACACGATTACCAGTGAGCCATTGCGACATGAAGAAAAGAGAAAATCTCGAAGGAAAATAT CTGCAAGACTGAATTCAGTATCTTCTGAGCACACAGATATCGTTGTTGAGACTGAGCACA AAGATGTTATTGTTTCTTTGGCCGGTTCCACTTCAAATGTCTCAATGGAGCAGCGGACAA ATCAAGAGCAGGATGGTGATTGTTTCTCAAGGAAATCCAATGAAAATCAGATATTAGGGA GGAGGTCTCTAAGACGAGCTGCTGAAAAGGTCGTCTCTTACAAGGAGATGCCCTTGAATG TTAAGATGCGACGACCTTAACTGCCAGGAGGATGACCATGGTGACATGTTGTAGCTTGCT GTCCTGACTAGCCTTAAGCAGGTATCCTTCTGTTTTTTTGTGTGCTCCAGAATCAGTGAT TGCTTGCACATCTCGTTCTACTTCAAACGAACCACCAAACAGTGGCGAAGCTAGAGCAAA CTTGAAGGTTGTACAATTGTTTTGTGGGTGCATAGACATCATGTGATCGTTGTGTATGTA AGATGAAAGTTTGTTCTT