Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019108_T096
CDS Infomation	cds chromosome:B73_RefGen_v4:7:17225842:17235286:1 gene:Zm00001d019108 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ribosomal protein S1-like1 description: Ribosomal protein S1-like1
Sequence	ATGCATCCTGGTGTTGTAGTTCATGGTTACATCTGCAACATTATTGAAGCTGGTTGTTTT GTCCGTTTCCTCGGACATTTGACTGGTTTCTCTCCCAAGGACAAAGCAGTTGATAGGTGG ATAGAAAAGCTTTCTGATGCGTTCTATGTTGGCCAGTCAGTTCGGAGTCATATACTCAGC GTAAATGCAGAAACTGCTAGAGTAAAACTCGCACTTCAACAGTCAATGTGCTCCTCAATG GATTCTTCATTTATTCAGGGATACTTTCTTCTGGATCAGAAGATTGCAGCATTGAAGTAC TCAAGCAATGACTGGGCTCGCCATTTTGGCATTGGTAGCTTAGTTGAGGCGGAGGTGGGA GCTATAGAAGAATATGGTATTATCCTTAACTTCAAAGACCATCTGGATACTGTTGGTTTA ATCGAGCACCATCAACTTGGTGGCAGTAGTGTGGAAGTGGGATCTTCTGTGAAGGGTCTT GTTTTGGATTTATCTGATGGAGTTGTTAACTTGTCCGTCAAACCAGAGCTAATTGACAGT GTCAGAATTGTTGGAAAAAAGAAGAAACGCCAAAGGGCCGTAGTTGCAGACTTGGAGCTT CATGAGGAAGTGAATGCAGTCGTGGAAATAATCAAAGACAGCTATATGGTCCTTTCCATC CCTGAGTACAATTATGCAATTGGGTTTTCACCACTGATGGATTATAACTCACAACTGCTT CCCCACCACCACTATGATAATGGACAACGCATTACTGTGGTTGTTGGAAATATCCCAAGT TCTGACTCTTCTGGAAGACTTATCTTACTACCAAAAGCTTCAGCACAGTATTCTTCCCTC TCTGATTCTAAAAGGGCTAAGAAGAAATCAGGCTACAAAATTGGGTCACTTGTTGAAGCA GAGATTATTGATATCAAACCGCTTGAGCTTCTACTGAAATTTGGTGGCAATCTTCATGGA AGAATCCATATTACTGAGATTCTTGAAGAGGATTCTGCTGAGCATCCCTTTAGTGAACTC AGAATAGGGCAAAAGCTTACTGCCAGAATTGTTTCAGAGGCTGAACCTTCTGGAAAGAGT GGCAAAAAATTCAAATGGGAATTGTCTATTAGGCCATGTATAGTCAATGGAGAGTTTGCT CAAAAAGAACAAAATCACACCACAAATGGGATTGTACGTGCTTATGTTGTCAAGGTGGAT AAGGAATGGGTCTGGTTAACTGTATCAAGAAATGTTATGGCTCATTTATTTTTACTTGAT AGTTCTTCCGAGCCCAGCGAACTGAAAGAATTCCAGCAGCGCTTTAGTGTTGGCCAAGCA GTGAAAGGTCGTGTTATCAGTGTGAACCAGGAGAAAAGGTTACTTCGGTTGAAGGCACTT GATAACCAATGCACACAACCGAATATAGATGAAACACAAGAACCAAAGTCCTCTGTGTTT GGACAAACAAAACAAGGAGATATCATTGGTGGACGTGTTCAAAAAATTCTACCTGGTGTT GGTGGGCTCGTCGTTCAGATTGGACCTCATCTCCATGGGAGGGTTCATTATACTGAAATT GTTGACTCTTGGGTGTCTGAACCCTTGTCTGGATTCCATGAGGGCCAGTTTGTGAAGTGC AAGGTCCTGTCTGTGAGCCGCTCATCAGAAGGATCACTTCGAGTTGATCTATCACTCCGT TCATCAAACCTGATCAGAGACTCTAACAACTCAAGACTAGATGATCTGGAAACCTGTACC TCCCGGATTGAGAAGATCAAGGATCTGCTCCCTGGAACTGAGATTAAGGGCTATGTGAAG AACGTGAATTCCAAAGGATGTTTTATTATGCTTTCTCGAATGGTTGATGCTAGGATTACT CTATCAAATTTATCAGATGAATATGTTGAAAATCCACAGAAGGATTTCCCCGTTGGAATG CTTGTACACGGAAGGATCCTGTCTACAGACCCATCATCAGGGAGAGTTGAGGCATCACTT AGGAAGACCACTGGTTCAAAATTGGAAAAGCTGGATGATATTAGTTATAGTGACTTGCAT GTTGGGGATATCGTTGATGGCCAAGTTAAGCGGGTGGAATCCTTTGGATTATTCGTTACA ATTCGGAGAAGTGAATTGGTTGGTCTGTGCCATGTATCAGAACTTTCTGATGAACCTGTC GTTGATATTAACTCTTGCTATAAAGCTGGTGATATGGTTAAAGCCAAAATTCTGAAGATT GATGAGACGCGGCATCGAGTATCACTTGGAATGAAGAAGTCATACTTTGATTCTGATCTG ACTGCTGACACAAATGATGATGAAAGTGCTCTTATGGACATCAGCGTTGCCCCTCAGATG GTTGAATATCATAACAGAAATTTAGTTCACCGCAAAGCAGAACCAAGGGCTTCTGTTCTG CCTCTTCAGGTTTCCTTGGATGAATCGGAAGGTTCCGACCTAGAGGATAATATTAGTAAT ACATGTCTTGAAATTGCTAATGGAACTGAAGCAAATGCTAAAAAGAGTGATAAACAGTTA AAGAAGGAAGCAAGAAAACAAAGGGAACTAGAAATCAGTGCTATGGAGGAAAGGGCTTTG CAGGAAGATATACCACAAACTCCAGATGATTTTGAGAAGTTAGTTAGGAGCTCCCCAAAT AGTAGTTTTATCTGGATAAAGTATATGGCAACTTTGTTAGATCTTGCAGATGTTGAGAAA GCACGTGCAGTAGCTGAGAGGGCTTTAAAAACAATAATCCCCAGAGAAGAAGAAGAGAAA CTAAATGTTTGGGTAGCATATTTCAATCTGGAAAATGAATACGGTAGTCCAAGGGAGGAT GCTGTGAAAAAGGTATTCCAAAGAGCCTTGCAATATTGTGATCCCAAAAAGCTGCACTTG GCTCTTCTTGCGATGTACGAGAGGACCGAACAGTATGAGCTTGCAGATGAACTTCTAGAC AGAATGACCAAAAGGTTCAAAACTTCCTGCAAGATATGGTTATGCCGCATTCAGTTTGCT CTCAAGCAAGGCAAGGATGTTGAGTACATCAAAGCCATTGTAAACCGTGCACTTCTAAGT TTGCCACACAGAAAGCGCATAAAATTCCTCTCACAAACTGCTATTCTAGAATTCAAATGT GGGGTGCCTGAAGAAGGAAGATCCAGATTTGAACTAATATTGCGGGAGTACCCAAAAAGA ACAGACCTTTGGAGTGTTTATCTAGACCAAGAAATCCGCCTTGGTGACGTAGAAGTTATA CGGGCATTGTTTGAGAGGGTGACTTGTCTGACCCTACCTCCAAAAAAGATGCAGTTCTTG TTCAAGAAGTATCTTAATTTCGAGAAGTCACTGGGTAAAGACAACGAAAGAATTCAGCTT GTGCAACAGAAGGCAATCGAATATGTTCAGAGTTCACTGCCGTCACAAGACAACTCTTGA

Peptide Sequence

PEP ID	Zm00001d019108_P096
PEP Infomation	pep chromosome:B73_RefGen_v4:7:17225842:17235286:1 gene:Zm00001d019108 transcript:Zm00001d019108_T096 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ribosomal protein S1-like1 description: Ribosomal protein S1-like1
Sequence	MHPGVVVHGYICNIIEAGCFVRFLGHLTGFSPKDKAVDRWIEKLSDAFYVGQSVRSHILS VNAETARVKLALQQSMCSSMDSSFIQGYFLLDQKIAALKYSSNDWARHFGIGSLVEAEVG AIEEYGIILNFKDHLDTVGLIEHHQLGGSSVEVGSSVKGLVLDLSDGVVNLSVKPELIDS VRIVGKKKKRQRAVVADLELHEEVNAVVEIIKDSYMVLSIPEYNYAIGFSPLMDYNSQLL PHHHYDNGQRITVVVGNIPSSDSSGRLILLPKASAQYSSLSDSKRAKKKSGYKIGSLVEA EIIDIKPLELLLKFGGNLHGRIHITEILEEDSAEHPFSELRIGQKLTARIVSEAEPSGKS GKKFKWELSIRPCIVNGEFAQKEQNHTTNGIVRAYVVKVDKEWVWLTVSRNVMAHLFLLD SSSEPSELKEFQQRFSVGQAVKGRVISVNQEKRLLRLKALDNQCTQPNIDETQEPKSSVF GQTKQGDIIGGRVQKILPGVGGLVVQIGPHLHGRVHYTEIVDSWVSEPLSGFHEGQFVKC KVLSVSRSSEGSLRVDLSLRSSNLIRDSNNSRLDDLETCTSRIEKIKDLLPGTEIKGYVK NVNSKGCFIMLSRMVDARITLSNLSDEYVENPQKDFPVGMLVHGRILSTDPSSGRVEASL RKTTGSKLEKLDDISYSDLHVGDIVDGQVKRVESFGLFVTIRRSELVGLCHVSELSDEPV VDINSCYKAGDMVKAKILKIDETRHRVSLGMKKSYFDSDLTADTNDDESALMDISVAPQM VEYHNRNLVHRKAEPRASVLPLQVSLDESEGSDLEDNISNTCLEIANGTEANAKKSDKQL KKEARKQRELEISAMEERALQEDIPQTPDDFEKLVRSSPNSSFIWIKYMATLLDLADVEK ARAVAERALKTIIPREEEEKLNVWVAYFNLENEYGSPREDAVKKVFQRALQYCDPKKLHL ALLAMYERTEQYELADELLDRMTKRFKTSCKIWLCRIQFALKQGKDVEYIKAIVNRALLS LPHRKRIKFLSQTAILEFKCGVPEEGRSRFELILREYPKRTDLWSVYLDQEIRLGDVEVI RALFERVTCLTLPPKKMQFLFKKYLNFEKSLGKDNERIQLVQQKAIEYVQSSLPSQDNS

Transcript Sequence

Transcript ID	Zm00001d019108_T096
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:17225842:17235286:1 gene:Zm00001d019108 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ribosomal protein S1-like1 description: Ribosomal protein S1-like1
Sequence	AAACCTGGGCACGAGTTCAACCAACTCTTAGTTCTCGATACTGAAGGTCAAAATTTAGTT CTTTCGGCAAAGCACTCACTTATAAATTGTGCAAATGACATTCCTTCAGAGATATCACAG ATGCATCCTGGTGTTGTAGTTCATGGTTACATCTGCAACATTATTGAAGCTGGTTGTTTT GTCCGTTTCCTCGGACATTTGACTGGTTTCTCTCCCAAGGACAAAGCAGTTGATAGGTGG ATAGAAAAGCTTTCTGATGCGTTCTATGTTGGCCAGTCAGTTCGGAGTCATATACTCAGC GTAAATGCAGAAACTGCTAGAGTAAAACTCGCACTTCAACAGTCAATGTGCTCCTCAATG GATTCTTCATTTATTCAGGGATACTTTCTTCTGGATCAGAAGATTGCAGCATTGAAGTAC TCAAGCAATGACTGGGCTCGCCATTTTGGCATTGGTAGCTTAGTTGAGGCGGAGGTGGGA GCTATAGAAGAATATGGTATTATCCTTAACTTCAAAGACCATCTGGATACTGTTGGTTTA ATCGAGCACCATCAACTTGGTGGCAGTAGTGTGGAAGTGGGATCTTCTGTGAAGGGTCTT GTTTTGGATTTATCTGATGGAGTTGTTAACTTGTCCGTCAAACCAGAGCTAATTGACAGT GTCAGAATTGTTGGAAAAAAGAAGAAACGCCAAAGGGCCGTAGTTGCAGACTTGGAGCTT CATGAGGAAGTGAATGCAGTCGTGGAAATAATCAAAGACAGCTATATGGTCCTTTCCATC CCTGAGTACAATTATGCAATTGGGTTTTCACCACTGATGGATTATAACTCACAACTGCTT CCCCACCACCACTATGATAATGGACAACGCATTACTGTGGTTGTTGGAAATATCCCAAGT TCTGACTCTTCTGGAAGACTTATCTTACTACCAAAAGCTTCAGCACAGTATTCTTCCCTC TCTGATTCTAAAAGGGCTAAGAAGAAATCAGGCTACAAAATTGGGTCACTTGTTGAAGCA GAGATTATTGATATCAAACCGCTTGAGCTTCTACTGAAATTTGGTGGCAATCTTCATGGA AGAATCCATATTACTGAGATTCTTGAAGAGGATTCTGCTGAGCATCCCTTTAGTGAACTC AGAATAGGGCAAAAGCTTACTGCCAGAATTGTTTCAGAGGCTGAACCTTCTGGAAAGAGT GGCAAAAAATTCAAATGGGAATTGTCTATTAGGCCATGTATAGTCAATGGAGAGTTTGCT CAAAAAGAACAAAATCACACCACAAATGGGATTGTACGTGCTTATGTTGTCAAGGTGGAT AAGGAATGGGTCTGGTTAACTGTATCAAGAAATGTTATGGCTCATTTATTTTTACTTGAT AGTTCTTCCGAGCCCAGCGAACTGAAAGAATTCCAGCAGCGCTTTAGTGTTGGCCAAGCA GTGAAAGGTCGTGTTATCAGTGTGAACCAGGAGAAAAGGTTACTTCGGTTGAAGGCACTT GATAACCAATGCACACAACCGAATATAGATGAAACACAAGAACCAAAGTCCTCTGTGTTT GGACAAACAAAACAAGGAGATATCATTGGTGGACGTGTTCAAAAAATTCTACCTGGTGTT GGTGGGCTCGTCGTTCAGATTGGACCTCATCTCCATGGGAGGGTTCATTATACTGAAATT GTTGACTCTTGGGTGTCTGAACCCTTGTCTGGATTCCATGAGGGCCAGTTTGTGAAGTGC AAGGTCCTGTCTGTGAGCCGCTCATCAGAAGGATCACTTCGAGTTGATCTATCACTCCGT TCATCAAACCTGATCAGAGACTCTAACAACTCAAGACTAGATGATCTGGAAACCTGTACC TCCCGGATTGAGAAGATCAAGGATCTGCTCCCTGGAACTGAGATTAAGGGCTATGTGAAG AACGTGAATTCCAAAGGATGTTTTATTATGCTTTCTCGAATGGTTGATGCTAGGATTACT CTATCAAATTTATCAGATGAATATGTTGAAAATCCACAGAAGGATTTCCCCGTTGGAATG CTTGTACACGGAAGGATCCTGTCTACAGACCCATCATCAGGGAGAGTTGAGGCATCACTT AGGAAGACCACTGGTTCAAAATTGGAAAAGCTGGATGATATTAGTTATAGTGACTTGCAT GTTGGGGATATCGTTGATGGCCAAGTTAAGCGGGTGGAATCCTTTGGATTATTCGTTACA ATTCGGAGAAGTGAATTGGTTGGTCTGTGCCATGTATCAGAACTTTCTGATGAACCTGTC GTTGATATTAACTCTTGCTATAAAGCTGGTGATATGGTTAAAGCCAAAATTCTGAAGATT GATGAGACGCGGCATCGAGTATCACTTGGAATGAAGAAGTCATACTTTGATTCTGATCTG ACTGCTGACACAAATGATGATGAAAGTGCTCTTATGGACATCAGCGTTGCCCCTCAGATG GTTGAATATCATAACAGAAATTTAGTTCACCGCAAAGCAGAACCAAGGGCTTCTGTTCTG CCTCTTCAGGTTTCCTTGGATGAATCGGAAGGTTCCGACCTAGAGGATAATATTAGTAAT ACATGTCTTGAAATTGCTAATGGAACTGAAGCAAATGCTAAAAAGAGTGATAAACAGTTA AAGAAGGAAGCAAGAAAACAAAGGGAACTAGAAATCAGTGCTATGGAGGAAAGGGCTTTG CAGGAAGATATACCACAAACTCCAGATGATTTTGAGAAGTTAGTTAGGAGCTCCCCAAAT AGTAGTTTTATCTGGATAAAGTATATGGCAACTTTGTTAGATCTTGCAGATGTTGAGAAA GCACGTGCAGTAGCTGAGAGGGCTTTAAAAACAATAATCCCCAGAGAAGAAGAAGAGAAA CTAAATGTTTGGGTAGCATATTTCAATCTGGAAAATGAATACGGTAGTCCAAGGGAGGAT GCTGTGAAAAAGGTATTCCAAAGAGCCTTGCAATATTGTGATCCCAAAAAGCTGCACTTG GCTCTTCTTGCGATGTACGAGAGGACCGAACAGTATGAGCTTGCAGATGAACTTCTAGAC AGAATGACCAAAAGGTTCAAAACTTCCTGCAAGATATGGTTATGCCGCATTCAGTTTGCT CTCAAGCAAGGCAAGGATGTTGAGTACATCAAAGCCATTGTAAACCGTGCACTTCTAAGT TTGCCACACAGAAAGCGCATAAAATTCCTCTCACAAACTGCTATTCTAGAATTCAAATGT GGGGTGCCTGAAGAAGGAAGATCCAGATTTGAACTAATATTGCGGGAGTACCCAAAAAGA ACAGACCTTTGGAGTGTTTATCTAGACCAAGAAATCCGCCTTGGTGACGTAGAAGTTATA CGGGCATTGTTTGAGAGGGTGACTTGTCTGACCCTACCTCCAAAAAAGATGCAGTTCTTG TTCAAGAAGTATCTTAATTTCGAGAAGTCACTGGGTAAAGACAACGAAAGAATTCAGCTT GTGCAACAGAAGGCAATCGAATATGTTCAGAGTTCACTGCCGTCACAAGACAACTCTTGA ACTACATGGAGACTTAATAAGCCCACAAACAATCATTAGGAAATACCAGTCGTACTGTAG ATGTGATCTCTTTGATGACTCCTTGAACATTATTGTGAAAAGGTCAATGTAAAATGTGGG CTGTTCAAAATTTTGTTTGAAACCTTTATATAAGTTATGAGTCTAGTATGTCATGTTTCA CCCAATTTTTTGGAAGGAACTATTCTAAGCCGGATCTGGTTCGAATATTGACCTTTTC