Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d019089_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:15820818:15823811:1 gene:Zm00001d019089 gene_biotype:protein_coding transcript_biotype:protein_coding description:HIPL1 protein
Sequence

ATGAGGGCGTCGACGATGGCTGGGGCGATCCTCGTCGCCGCCACGCTGCTGCTCGTCGTC
GCCGTCCGGGACGGCCACTGCGCGCAACTGTGCATGGACTCAACAGCGTTCCCGCGGGCG
ACCAACGCGTCCCTCTCCTTCTGCGGCTACAACGGCACCTCCTGCTGCAACGCCACGGAC
GACGCCGCCGTCCAGAAGCAGTTCGCGGCCATGAACATCTCCGGCACGCCGTGCGGCGAC
GTCGTCAAGAACGTCCTCTGCGCGAGATGCAGCCCGTACGCCGGCGAGCTGTTCACCGTG
ACGACGGCCCCGCGGACGGTGCCGCTGCTGTGCAGCACCACCGGCGCGTCGAGCCGCCTG
AGCAGCGCCGCCAAGCCCGCGGCGGCGGCGGCAACGGCAACGACGGACTACTGCACGCAG
GTGTGGGACACCTGCAAGGACGTGCGCGTGCCGGGGTCGCCGTTCCAGGCGCCCAGGGGC
ACGGCGCCGTCCCCGGCGCCGCGGCTGACCGACCTGTGGCAGTCCGCGGGCGAGTTCTGC
GGCTCGCTGGGCGGCGCCGGCAGGTCGCCGTGCCTGGACGGCGGCGGCGCGGCGTTCAAC
TCCACCCGCCCGGCGGCGCTGCCGCTCCGCGGCATGTGCCTGGAGCGCGTCGGCAACGGC
TCCTACCTCAACATGGCGGCGCACCCGGACGGGTCCGCCCGCGTGTTCCTCAGCACCCAG
GCCGGCAAGGTCTTCCTGGCCGCCGTGCCGCCGCAGGGCTCCGGGCGGGCACTGCAGATG
GACGCGGCCAACCCGTTCCTCGACATCACCGACGAGGTGCACATGGACAACGAGTTCGGC
CTCATGGGCCTCGCCTTCCACCCGGATTTCGCTGCCAACGGCCGCTTCTTCGTCTCCTAC
AATTGCGACAAGACGCAGCAGGCCACGTGCGCCGGCCGCTGCGCCTGCAACTCCGACGTC
GGCTGCGACCCGTCCAAGCTCGGCGCCGACAACGGCAAGCAGCCGTGCCAGTACCACAGC
GTCGTCGCCGAGTACAGCGCCAACTCCACCTCCGGAACGCCGGCGACGGCGACCTCGGCG
AACCCGGCGGAGGTGAAGAGGATCATCACGCTGGGGCTGCCGTTCACGACGCACCACGGC
GGGCAGATCCTCTTCAGCCCGGCCGACGGCTACATGTACTTCGCCATGGGCGACGGCGGC
AGCGTCGGCGACCCCTGGAACTTCGCGCAGAACAAGAAGTCGCTGCTCGGCAAGATCCTC
CGGGTCGACGTCAACACCATGCCGAGTGGCAACACCACGGCTGGCTGGGGCAACTACGCC
ATCCCCAAGGACAACCCCGCCTCCGCTGATCCTAGCTTCGCGCCGGAGGTCTTCGCTCTC
GGCTTCAAGAACCCCTGGCGGTGCAGCTTCGACTCCGGCAAGCCGTCCTACATGTACTGC
GCCGATGTCGGCCAGGCGGCGTACGAGGAGGTGGACCTGGTGATGAAGGGCGGCAACTAC
GGGTGGCGCGTGTTCGAGGGCCCCCTGCCGTTCAACCCGCCGTCCACCCCCGGCGGCAAC
ACCTCCGCCGACTCCATCGACGCCATCGCCCCCGTCATGGGCTACGCCCACAGCTCCGTC
AACAGCAACGTCGGCTCCGCCTCCATCACCGGCGGCTACGTCTACCGCTCCATGACGGAC
CCATGCCTCAACGGCAGGTACCTGTACGCCGACCTGTACGCCAAGTCGATGTGGGCGGGG
ACCGAGACGCCGGAGGGCAGCGGCGTGTACAACGTGTCGACGATGGCGTTCGGCTGCTCC
AAGAGCTCGCCCATCCCGTGCGACTTCGCCGCCGGGAGCTCGCTGCCGTCGCTGGGCTAC
ATCTTCTCCTTCGGCGAGGACAACGCCAAGGACGTCTACCTGCTCACCAGCAAGGGCGTG
TACCGGGTGGTCGACCCTGCCGAGTGCGACTACGCGTGCCCCGTCAAGAGCTCGGCCCCG
GGCGCCGGCACGCCGCCGCCCGGTGCTGCCCCGAGTTCGGCGCTCAGGGCACGCGCGCCG
GCGTTGGCCACGCTGCTCGCGGGCGTGCTGCTCGGCTTCCTCTGCTTCAGCTTTTGA

Peptide Sequence

PEP ID

Zm00001d019089_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:15820818:15823811:1 gene:Zm00001d019089 transcript:Zm00001d019089_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:HIPL1 protein
Sequence

MRASTMAGAILVAATLLLVVAVRDGHCAQLCMDSTAFPRATNASLSFCGYNGTSCCNATD
DAAVQKQFAAMNISGTPCGDVVKNVLCARCSPYAGELFTVTTAPRTVPLLCSTTGASSRL
SSAAKPAAAAATATTDYCTQVWDTCKDVRVPGSPFQAPRGTAPSPAPRLTDLWQSAGEFC
GSLGGAGRSPCLDGGGAAFNSTRPAALPLRGMCLERVGNGSYLNMAAHPDGSARVFLSTQ
AGKVFLAAVPPQGSGRALQMDAANPFLDITDEVHMDNEFGLMGLAFHPDFAANGRFFVSY
NCDKTQQATCAGRCACNSDVGCDPSKLGADNGKQPCQYHSVVAEYSANSTSGTPATATSA
NPAEVKRIITLGLPFTTHHGGQILFSPADGYMYFAMGDGGSVGDPWNFAQNKKSLLGKIL
RVDVNTMPSGNTTAGWGNYAIPKDNPASADPSFAPEVFALGFKNPWRCSFDSGKPSYMYC
ADVGQAAYEEVDLVMKGGNYGWRVFEGPLPFNPPSTPGGNTSADSIDAIAPVMGYAHSSV
NSNVGSASITGGYVYRSMTDPCLNGRYLYADLYAKSMWAGTETPEGSGVYNVSTMAFGCS
KSSPIPCDFAAGSSLPSLGYIFSFGEDNAKDVYLLTSKGVYRVVDPAECDYACPVKSSAP
GAGTPPPGAAPSSALRARAPALATLLAGVLLGFLCFSF

Transcript Sequence

Transcript ID

Zm00001d019089_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:15820818:15823811:1 gene:Zm00001d019089 gene_biotype:protein_coding transcript_biotype:protein_coding description:HIPL1 protein
Sequence

GCCATGAGGGCGTCGACGATGGCTGGGGCGATCCTCGTCGCCGCCACGCTGCTGCTCGTC
GTCGCCGTCCGGGACGGCCACTGCGCGCAACTGTGCATGGACTCAACAGCGTTCCCGCGG
GCGACCAACGCGTCCCTCTCCTTCTGCGGCTACAACGGCACCTCCTGCTGCAACGCCACG
GACGACGCCGCCGTCCAGAAGCAGTTCGCGGCCATGAACATCTCCGGCACGCCGTGCGGC
GACGTCGTCAAGAACGTCCTCTGCGCGAGATGCAGCCCGTACGCCGGCGAGCTGTTCACC
GTGACGACGGCCCCGCGGACGGTGCCGCTGCTGTGCAGCACCACCGGCGCGTCGAGCCGC
CTGAGCAGCGCCGCCAAGCCCGCGGCGGCGGCGGCAACGGCAACGACGGACTACTGCACG
CAGGTGTGGGACACCTGCAAGGACGTGCGCGTGCCGGGGTCGCCGTTCCAGGCGCCCAGG
GGCACGGCGCCGTCCCCGGCGCCGCGGCTGACCGACCTGTGGCAGTCCGCGGGCGAGTTC
TGCGGCTCGCTGGGCGGCGCCGGCAGGTCGCCGTGCCTGGACGGCGGCGGCGCGGCGTTC
AACTCCACCCGCCCGGCGGCGCTGCCGCTCCGCGGCATGTGCCTGGAGCGCGTCGGCAAC
GGCTCCTACCTCAACATGGCGGCGCACCCGGACGGGTCCGCCCGCGTGTTCCTCAGCACC
CAGGCCGGCAAGGTCTTCCTGGCCGCCGTGCCGCCGCAGGGCTCCGGGCGGGCACTGCAG
ATGGACGCGGCCAACCCGTTCCTCGACATCACCGACGAGGTGCACATGGACAACGAGTTC
GGCCTCATGGGCCTCGCCTTCCACCCGGATTTCGCTGCCAACGGCCGCTTCTTCGTCTCC
TACAATTGCGACAAGACGCAGCAGGCCACGTGCGCCGGCCGCTGCGCCTGCAACTCCGAC
GTCGGCTGCGACCCGTCCAAGCTCGGCGCCGACAACGGCAAGCAGCCGTGCCAGTACCAC
AGCGTCGTCGCCGAGTACAGCGCCAACTCCACCTCCGGAACGCCGGCGACGGCGACCTCG
GCGAACCCGGCGGAGGTGAAGAGGATCATCACGCTGGGGCTGCCGTTCACGACGCACCAC
GGCGGGCAGATCCTCTTCAGCCCGGCCGACGGCTACATGTACTTCGCCATGGGCGACGGC
GGCAGCGTCGGCGACCCCTGGAACTTCGCGCAGAACAAGAAGTCGCTGCTCGGCAAGATC
CTCCGGGTCGACGTCAACACCATGCCGAGTGGCAACACCACGGCTGGCTGGGGCAACTAC
GCCATCCCCAAGGACAACCCCGCCTCCGCTGATCCTAGCTTCGCGCCGGAGGTCTTCGCT
CTCGGCTTCAAGAACCCCTGGCGGTGCAGCTTCGACTCCGGCAAGCCGTCCTACATGTAC
TGCGCCGATGTCGGCCAGGCGGCGTACGAGGAGGTGGACCTGGTGATGAAGGGCGGCAAC
TACGGGTGGCGCGTGTTCGAGGGCCCCCTGCCGTTCAACCCGCCGTCCACCCCCGGCGGC
AACACCTCCGCCGACTCCATCGACGCCATCGCCCCCGTCATGGGCTACGCCCACAGCTCC
GTCAACAGCAACGTCGGCTCCGCCTCCATCACCGGCGGCTACGTCTACCGCTCCATGACG
GACCCATGCCTCAACGGCAGGTACCTGTACGCCGACCTGTACGCCAAGTCGATGTGGGCG
GGGACCGAGACGCCGGAGGGCAGCGGCGTGTACAACGTGTCGACGATGGCGTTCGGCTGC
TCCAAGAGCTCGCCCATCCCGTGCGACTTCGCCGCCGGGAGCTCGCTGCCGTCGCTGGGC
TACATCTTCTCCTTCGGCGAGGACAACGCCAAGGACGTCTACCTGCTCACCAGCAAGGGC
GTGTACCGGGTGGTCGACCCTGCCGAGTGCGACTACGCGTGCCCCGTCAAGAGCTCGGCC
CCGGGCGCCGGCACGCCGCCGCCCGGTGCTGCCCCGAGTTCGGCGCTCAGGGCACGCGCG
CCGGCGTTGGCCACGCTGCTCGCGGGCGTGCTGCTCGGCTTCCTCTGCTTCAGCTTTTGA
GGAGCGTGTTCTGTTTTGGGGGTTGACAGCGATTTGTTGATTTTCAGATGGTCCTGCTGA
GACATGTACGTGCGTATGAATGTATCATAATTAAATGTGCAGCAAATAGCATTTGATTTG
TTCTGGT