Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d019060_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:14494700:14497925:1 gene:Zm00001d019060 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:deoxy xylulose synthase 2 description: deoxy xylulose synthase 2
Sequence	ATGTCTCCAATAATGGCGCTCCAGGCATCGTCGTCGTCGCCTTCCGCGTTCCGTGCGGTC CCGGCCACCGCCAACGCTTCCTGCCGGCGTCAGTTCCAGGTGCGCGCTCAGGTAGCCGGC GGCAGCAGCAGTAGCAGCATCGGAGCCGATGGTGGGAAGATGATGGTTTCCAAGGAGCCG GCGGCGGCGGCCACGTCGTCGGGACCGTGGAAGATCGACTTCTCCGGCGAGAAGCCGCCG ACGCCGCTGCTGGACACCGTGAACTACCCGCTCCACATGAAGAACCTGTCGATCTTGGAG CTGGAGCAGCTGGCGGCGGAGCTCCGCGCGGAGGTCGTGCACACCGTGTCCAAGACCGGC GGGCACCTGAGCTCCAGCCTGGGCGTTGTGGAGCTGTCGGTGGCGCTGCACCACGTGTTC GACACCCCGGAGGACAAGATCATCTGGGACGTGGGCCACCAGGCGTACCCGCACAAGATC CTGACGGGGCGGCGGTCGCGGATGCACACCATCCGCCAGACCTCCGGGCTGGCGGGGTTC CCCAAGCGCGACGAGAGCGCGCACGACGCGTTCGGGGTCGGCCACAGCTCCACCAGCATC TCGGCGGCGCTGGGCATGGCCGTGGCGCGGGACCTCCTGGGGCGCAAGAACCACGTGATC TCCGTCATCGGCGACGGCGCCATGACGGCCGGCCAGGCCTACGAGGCCATGAACAACTCG GGCTACCTGGACGCCAACATGATCGTGGTGCTGAACGACAACAAGCAGGTGTCGCTCCCG ACGGCCACGCTGGACGGGCCGTCCAAGCCCGTGGGCGCGCTGAGCCGGGCGCTGACTAAG CTCCAGTCCAGCACCAAGTTCCGGCGCCTCCGCGAGGCGGCCAAGTCCGTGACGAAGCAG ATCGGCGGGCCGACGCACGAGGTGGCCGCCAAGGTGGACGAGTACGCGCGCGGCATGATC AGCGCCTCCGGGTCGTCGCTGTTCGAGGAGCTCGGGCTCTACTACATCGGCCCCGTGGAC GGGCACTGCGTGGAGGACCTGGTGACCATCTTCGAGAAGGTGAAGTCGATGCCGGCGCCG GGGCCCGTGCTGATCCACATCGTGACGGAGAAAGGGAAGGGGTACCCGCCGGCGGAGGCG GCGGCGGACCGGATGCACGGCGTGGTGAAGTTCGAGCCGGCTACGGGGAGGCAGCTCAAG TCCAAGTCCCCGACGCTGTCGTACACGCAGTACTTCGCGGAGTCCCTGATCCGGGAGGCG GAGAGCGACGAGAAGGTGGTGGCCATCCACGCGGCCATGGGCGGCGGCACGGGGCTGAAC TACTTCCAGAAGCGGTTCCCGGAGCGGTGCTTCGACGTGGGCATCGCGGAGCAGCACGCG GTGACGTTCGCGGCGGGGCTGGCCGCGGAGGGGCTGAAGCCGTTCTGCGCCATCTACTCG TCGTTCCTGCAGCGCGGGTACGACCAGGTGGTGCACGACGTGGACCTGCAGCGGCTGCCC GTGCGGTTCGCGCTGGACCGGGCGGGGCTGGTGGGCGCCGACGGGCCCACGCACTGCGGC GCCTTCGACGTGGCGTACATGGCGTGCCTGCCCAACATGGTGGTGATGGCGCCCGCGGAC GAGGCGGAGCTGATGCACATGGTGGCGACGGCGGCCGCCATCGACGACCGGCCCAGCTGC TTCAGGTTCCCGCGCGGCAACGGCGTCGGCGCGGCGCTCCCGCCGGGGAACAAGGGCGTG GCGCTGGAGGTGGGCAGGGGCAGGGTGCTGGTGGGCGGCGGCACGCGGGTGGCGCTCCTT GGGTACGGCGCCATGGTGCAGGCGTGCCTCAAGGCCGCGGAGGCGCTGAAGGAGCACGAC GTGTACGTGACGGTGGCCGACGCCCGGTTCTGCAAGCCGCTGGACACGGCGCTGATCCGG GAGCTCGCCGCCGAGCACGAGGTGCTGATCACCGCCGAGGAGGGATCCATCGGCGGGTTC GGCTCCCACGTCGCCCACTACCTCAGCCTGACCGGCCTCCTGGACGGGCCCCTCAAACTG AGATCCATGTTCCTGCCGGACCGGTACATCGACCATGGCGCACCGCAGGACCAGATCGAG GAGGCAGGGCTGACGCCGCGGCACATCGCCGCCACCGTGCTGTCCCTGCTGGGGAGGCCA TTGGAGGCCATGCAGCTCAAGTGA

Peptide Sequence

PEP ID	Zm00001d019060_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:14494700:14497925:1 gene:Zm00001d019060 transcript:Zm00001d019060_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:deoxy xylulose synthase 2 description: deoxy xylulose synthase 2
Sequence	MSPIMALQASSSSPSAFRAVPATANASCRRQFQVRAQVAGGSSSSSIGADGGKMMVSKEP AAAATSSGPWKIDFSGEKPPTPLLDTVNYPLHMKNLSILELEQLAAELRAEVVHTVSKTG GHLSSSLGVVELSVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGF PKRDESAHDAFGVGHSSTSISAALGMAVARDLLGRKNHVISVIGDGAMTAGQAYEAMNNS GYLDANMIVVLNDNKQVSLPTATLDGPSKPVGALSRALTKLQSSTKFRRLREAAKSVTKQ IGGPTHEVAAKVDEYARGMISASGSSLFEELGLYYIGPVDGHCVEDLVTIFEKVKSMPAP GPVLIHIVTEKGKGYPPAEAAADRMHGVVKFEPATGRQLKSKSPTLSYTQYFAESLIREA ESDEKVVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS SFLQRGYDQVVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPAD EAELMHMVATAAAIDDRPSCFRFPRGNGVGAALPPGNKGVALEVGRGRVLVGGGTRVALL GYGAMVQACLKAAEALKEHDVYVTVADARFCKPLDTALIRELAAEHEVLITAEEGSIGGF GSHVAHYLSLTGLLDGPLKLRSMFLPDRYIDHGAPQDQIEEAGLTPRHIAATVLSLLGRP LEAMQLK

Transcript Sequence

Transcript ID	Zm00001d019060_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:14494700:14497925:1 gene:Zm00001d019060 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:deoxy xylulose synthase 2 description: deoxy xylulose synthase 2
Sequence	ACGCCCCGCCTTGCCTTCATCCTCCTCCTCTCCTCCATCTCTCCTCGCCCCAGCGCGCGC GCGGCATCGCCGTCGAGCTACTTACTCGAGCTTCAGTTCCAGCTACTGGAGCACGCAGTT CATATTAATACACAGCTTAGCTGTACCAAGCGGCATCTTGCACGCTAGCTAAACTAGAGG AACTCGCTGCGCGCATGTCTCCAATAATGGCGCTCCAGGCATCGTCGTCGTCGCCTTCCG CGTTCCGTGCGGTCCCGGCCACCGCCAACGCTTCCTGCCGGCGTCAGTTCCAGGTGCGCG CTCAGGTAGCCGGCGGCAGCAGCAGTAGCAGCATCGGAGCCGATGGTGGGAAGATGATGG TTTCCAAGGAGCCGGCGGCGGCGGCCACGTCGTCGGGACCGTGGAAGATCGACTTCTCCG GCGAGAAGCCGCCGACGCCGCTGCTGGACACCGTGAACTACCCGCTCCACATGAAGAACC TGTCGATCTTGGAGCTGGAGCAGCTGGCGGCGGAGCTCCGCGCGGAGGTCGTGCACACCG TGTCCAAGACCGGCGGGCACCTGAGCTCCAGCCTGGGCGTTGTGGAGCTGTCGGTGGCGC TGCACCACGTGTTCGACACCCCGGAGGACAAGATCATCTGGGACGTGGGCCACCAGGCGT ACCCGCACAAGATCCTGACGGGGCGGCGGTCGCGGATGCACACCATCCGCCAGACCTCCG GGCTGGCGGGGTTCCCCAAGCGCGACGAGAGCGCGCACGACGCGTTCGGGGTCGGCCACA GCTCCACCAGCATCTCGGCGGCGCTGGGCATGGCCGTGGCGCGGGACCTCCTGGGGCGCA AGAACCACGTGATCTCCGTCATCGGCGACGGCGCCATGACGGCCGGCCAGGCCTACGAGG CCATGAACAACTCGGGCTACCTGGACGCCAACATGATCGTGGTGCTGAACGACAACAAGC AGGTGTCGCTCCCGACGGCCACGCTGGACGGGCCGTCCAAGCCCGTGGGCGCGCTGAGCC GGGCGCTGACTAAGCTCCAGTCCAGCACCAAGTTCCGGCGCCTCCGCGAGGCGGCCAAGT CCGTGACGAAGCAGATCGGCGGGCCGACGCACGAGGTGGCCGCCAAGGTGGACGAGTACG CGCGCGGCATGATCAGCGCCTCCGGGTCGTCGCTGTTCGAGGAGCTCGGGCTCTACTACA TCGGCCCCGTGGACGGGCACTGCGTGGAGGACCTGGTGACCATCTTCGAGAAGGTGAAGT CGATGCCGGCGCCGGGGCCCGTGCTGATCCACATCGTGACGGAGAAAGGGAAGGGGTACC CGCCGGCGGAGGCGGCGGCGGACCGGATGCACGGCGTGGTGAAGTTCGAGCCGGCTACGG GGAGGCAGCTCAAGTCCAAGTCCCCGACGCTGTCGTACACGCAGTACTTCGCGGAGTCCC TGATCCGGGAGGCGGAGAGCGACGAGAAGGTGGTGGCCATCCACGCGGCCATGGGCGGCG GCACGGGGCTGAACTACTTCCAGAAGCGGTTCCCGGAGCGGTGCTTCGACGTGGGCATCG CGGAGCAGCACGCGGTGACGTTCGCGGCGGGGCTGGCCGCGGAGGGGCTGAAGCCGTTCT GCGCCATCTACTCGTCGTTCCTGCAGCGCGGGTACGACCAGGTGGTGCACGACGTGGACC TGCAGCGGCTGCCCGTGCGGTTCGCGCTGGACCGGGCGGGGCTGGTGGGCGCCGACGGGC CCACGCACTGCGGCGCCTTCGACGTGGCGTACATGGCGTGCCTGCCCAACATGGTGGTGA TGGCGCCCGCGGACGAGGCGGAGCTGATGCACATGGTGGCGACGGCGGCCGCCATCGACG ACCGGCCCAGCTGCTTCAGGTTCCCGCGCGGCAACGGCGTCGGCGCGGCGCTCCCGCCGG GGAACAAGGGCGTGGCGCTGGAGGTGGGCAGGGGCAGGGTGCTGGTGGGCGGCGGCACGC GGGTGGCGCTCCTTGGGTACGGCGCCATGGTGCAGGCGTGCCTCAAGGCCGCGGAGGCGC TGAAGGAGCACGACGTGTACGTGACGGTGGCCGACGCCCGGTTCTGCAAGCCGCTGGACA CGGCGCTGATCCGGGAGCTCGCCGCCGAGCACGAGGTGCTGATCACCGCCGAGGAGGGAT CCATCGGCGGGTTCGGCTCCCACGTCGCCCACTACCTCAGCCTGACCGGCCTCCTGGACG GGCCCCTCAAACTGAGATCCATGTTCCTGCCGGACCGGTACATCGACCATGGCGCACCGC AGGACCAGATCGAGGAGGCAGGGCTGACGCCGCGGCACATCGCCGCCACCGTGCTGTCCC TGCTGGGGAGGCCATTGGAGGCCATGCAGCTCAAGTGAACGACGACGACGACGATAACGA CGACCTAGCTTCACCATCACCACCAACAGATAAATAAAAAGCAAACCAAACCAAGGCGTT TGTACAGTACAGGAGATGGGTCCAAGGCCTTGGGCCGGCCTGTTGGCACCGTAGTAGCAA GGATAGCAAATGCTTCCAAACGCAGGCTGTCAAGTGCAGGTGGATATGTCTTTCTCCTAG CCAGTGACGACATAGAGCATACATCTGCGCGGGCGGTCCCACAAGTCAGCTGATCCTCTG CTAGTTTTTTTTATTTTTATTTTAAAGAACGTCTTTTTGTATAGGATGCTGCAAGCATGT ACGCATGGTACTAGCTACAAGCATATATAGAATAACAAATCAAAATTCAT