Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018987_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:12164691:12175631:1 gene:Zm00001d018987 gene_biotype:protein_coding transcript_biotype:protein_coding description:AUGMIN subunit 3
Sequence

ATGAGCGCGAAGCAGCTCTGCGACGCCCTGGCCGCCGTGGGGTTCGACGCCGGCGACGAT
CCTCTCGACGCGGATAGCCTCGAGTGGGCGTTTCTCCAGGGGGAGGACTCCCGCCGGATG
CTTGCGTGGGTCTGTGCCCGGCTCCGCCCTGGCAACGTCCTCTCCGCCACAGACCTCGAG
CTGTACGAGCAGCTTGAAATGGAAGGCAAGTTATTGAAGGGGGAAGACTTAGATTTTGCT
TTTGATCGTATTTCGGCTTTCTCAGACAATATGGAGAATCAGGAATACATATTCTTGACG
GAAGAAAGTCTTGAAGACATCTGTGAGTCAAAGCTTGCTCTTAGAGCTGAAGTTTCTGAT
TTGGAAAGGCAGCTTGCTTCTCTGGAGTGGAGGCTTGATATACTTACAGCACAAGCTACC
ACCATTAACCAGGGAAAGAAGTCCCGCTCATCTGCTAATACTAGAGCTAATGGACAACTT
ACTGGCTTAGATAAGATGTTTGCTAAGAGAAGTTTAGAGATGAATGCAATACTTGGAAAA
CTTACTGCATCCACACAAGAGTTGTCTTACTATCACTCAGAAGCTGATATCGGGGTCTAC
CTATCATACTGTGACTTCCAGCCTTATGTGAGGAGTGCCCTGGCTTGTACCAAGGAACTA
AACAAATGGTTCTCTAAGAAGTTTGAGAAGGGACCACTCCAACTTGTTGTTCAAGATGAC
AAGTTAAGAGGAGATCCGGTAAACTCCCACCATTTTGTTGTCGAACTGAGCCGAATTAAC
TCCATATTTGCTAAAAGTAAGAGACAGTACATAGAAGCACAAGTAGAATATGCTAAAGAA
GAAGCTATACTATCAGTTCTGAGAACTCAGTTGGCATCCCAACAGTCATATATTCATCAG
GATAGCCATTCTCTAAGGAGGAAAAACTCCGAACTTGCTGAAGAGCTTAAAGATCTTTCC
CATCAAGTGCAGGAATACTTATCTGAGACTGTTACAGGCCTGTGTGCAGACCTTGCTCGG
CTTTCAGGTGCAAATATTTTGGAAGGAGATCACAATTTAAAGCTTCTGCGCCAGGACTGC
TACATAAGTCATCAGAAGAAGTTCATCAACCATCTTGTCAATCAACTTGCTGCTCACCTA
TTTCTAAAGATAGCCTGCCAGCTCGAAGAACAGATAAAAATATCGAGTGCCTACTCATTT
CTGAAAGCTGTAGAATTGGAATTGCAGGGCTACTTCTCAGCTTTTGATGGCCGCCTGGGC
CGGTACAATTTAATTGATCAAGCAGCATCTGAAATGTTTGAAGAGGGATCAGTTGACGAC
AGTGATTCTTATCTTCATGCTGTGAGGGATATCCTTAGCAGTCACTCGAGTTCCCAAGCA
ACGTCACCAGAATATGTGTCATCATATGGTTTGATCGGGCAGATAACAGAGCTGCAGGAT
GAGCTCCAGTACCTTCAGCATGAGACCGAAAATGTCCTTCCACGTGAGCGAGGAAGATGC
ACCGACGAACTATGCAGGATGATCCAAACACTGGAGCAAATTCTCGCTGTGTCCCTTTCT
GATGAGCAACCAAAGCTGACACCATGGCCATTGGCGCATTCACTTGAAGACCTCGAAATG
GTCAGCCAGCAGGTCTCCGCTTCCGTTAGTGAGGTGACACTAGCTCGAGACGAAAAGGCC
GAGAAGCTGAAACAGCCTTCACGCAACGCGCAGCAGGAAAGGCAGGTGTTCTCAGATTTC
TTCTGCCACCCGGAACGACTCGAGAATCGAGTGGAAGAGCTGCTCTCCCGCTTTAGAGCT
CTCCCTGAGTAG

Peptide Sequence

PEP ID

Zm00001d018987_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:12164691:12175631:1 gene:Zm00001d018987 transcript:Zm00001d018987_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:AUGMIN subunit 3
Sequence

MSAKQLCDALAAVGFDAGDDPLDADSLEWAFLQGEDSRRMLAWVCARLRPGNVLSATDLE
LYEQLEMEGKLLKGEDLDFAFDRISAFSDNMENQEYIFLTEESLEDICESKLALRAEVSD
LERQLASLEWRLDILTAQATTINQGKKSRSSANTRANGQLTGLDKMFAKRSLEMNAILGK
LTASTQELSYYHSEADIGVYLSYCDFQPYVRSALACTKELNKWFSKKFEKGPLQLVVQDD
KLRGDPVNSHHFVVELSRINSIFAKSKRQYIEAQVEYAKEEAILSVLRTQLASQQSYIHQ
DSHSLRRKNSELAEELKDLSHQVQEYLSETVTGLCADLARLSGANILEGDHNLKLLRQDC
YISHQKKFINHLVNQLAAHLFLKIACQLEEQIKISSAYSFLKAVELELQGYFSAFDGRLG
RYNLIDQAASEMFEEGSVDDSDSYLHAVRDILSSHSSSQATSPEYVSSYGLIGQITELQD
ELQYLQHETENVLPRERGRCTDELCRMIQTLEQILAVSLSDEQPKLTPWPLAHSLEDLEM
VSQQVSASVSEVTLARDEKAEKLKQPSRNAQQERQVFSDFFCHPERLENRVEELLSRFRA
LPE

Transcript Sequence

Transcript ID

Zm00001d018987_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:12164691:12175631:1 gene:Zm00001d018987 gene_biotype:protein_coding transcript_biotype:protein_coding description:AUGMIN subunit 3
Sequence

GAGCCAAGCCATTCCCACGGCCCCACCACTTTGCAAACTTCCATCCGACCCCTCCATTTC
CTCACGCATCCCCACTGAGCACTGACCCCCACGCCGCCGGCGATGAGCGCGAAGCAGCTC
TGCGACGCCCTGGCCGCCGTGGGGTTCGACGCCGGCGACGATCCTCTCGACGCGGATAGC
CTCGAGTGGGCGTTTCTCCAGGGGGAGGACTCCCGCCGGATGCTTGCGTGGGTCTGTGCC
CGGCTCCGCCCTGGCAACGTCCTCTCCGCCACAGACCTCGAGCTGTACGAGCAGCTTGAA
ATGGAAGGCAAGTTATTGAAGGGGGAAGACTTAGATTTTGCTTTTGATCGTATTTCGGCT
TTCTCAGACAATATGGAGAATCAGGAATACATATTCTTGACGGAAGAAAGTCTTGAAGAC
ATCTGTGAGTCAAAGCTTGCTCTTAGAGCTGAAGTTTCTGATTTGGAAAGGCAGCTTGCT
TCTCTGGAGTGGAGGCTTGATATACTTACAGCACAAGCTACCACCATTAACCAGGGAAAG
AAGTCCCGCTCATCTGCTAATACTAGAGCTAATGGACAACTTACTGGCTTAGATAAGATG
TTTGCTAAGAGAAGTTTAGAGATGAATGCAATACTTGGAAAACTTACTGCATCCACACAA
GAGTTGTCTTACTATCACTCAGAAGCTGATATCGGGGTCTACCTATCATACTGTGACTTC
CAGCCTTATGTGAGGAGTGCCCTGGCTTGTACCAAGGAACTAAACAAATGGTTCTCTAAG
AAGTTTGAGAAGGGACCACTCCAACTTGTTGTTCAAGATGACAAGTTAAGAGGAGATCCG
GTAAACTCCCACCATTTTGTTGTCGAACTGAGCCGAATTAACTCCATATTTGCTAAAAGT
AAGAGACAGTACATAGAAGCACAAGTAGAATATGCTAAAGAAGAAGCTATACTATCAGTT
CTGAGAACTCAGTTGGCATCCCAACAGTCATATATTCATCAGGATAGCCATTCTCTAAGG
AGGAAAAACTCCGAACTTGCTGAAGAGCTTAAAGATCTTTCCCATCAAGTGCAGGAATAC
TTATCTGAGACTGTTACAGGCCTGTGTGCAGACCTTGCTCGGCTTTCAGGTGCAAATATT
TTGGAAGGAGATCACAATTTAAAGCTTCTGCGCCAGGACTGCTACATAAGTCATCAGAAG
AAGTTCATCAACCATCTTGTCAATCAACTTGCTGCTCACCTATTTCTAAAGATAGCCTGC
CAGCTCGAAGAACAGATAAAAATATCGAGTGCCTACTCATTTCTGAAAGCTGTAGAATTG
GAATTGCAGGGCTACTTCTCAGCTTTTGATGGCCGCCTGGGCCGGTACAATTTAATTGAT
CAAGCAGCATCTGAAATGTTTGAAGAGGGATCAGTTGACGACAGTGATTCTTATCTTCAT
GCTGTGAGGGATATCCTTAGCAGTCACTCGAGTTCCCAAGCAACGTCACCAGAATATGTG
TCATCATATGGTTTGATCGGGCAGATAACAGAGCTGCAGGATGAGCTCCAGTACCTTCAG
CATGAGACCGAAAATGTCCTTCCACGTGAGCGAGGAAGATGCACCGACGAACTATGCAGG
ATGATCCAAACACTGGAGCAAATTCTCGCTGTGTCCCTTTCTGATGAGCAACCAAAGCTG
ACACCATGGCCATTGGCGCATTCACTTGAAGACCTCGAAATGGTCAGCCAGCAGGTCTCC
GCTTCCGTTAGTGAGGTGACACTAGCTCGAGACGAAAAGGCCGAGAAGCTGAAACAGCCT
TCACGCAACGCGCAGCAGGAAAGGCAGGTGTTCTCAGATTTCTTCTGCCACCCGGAACGA
CTCGAGAATCGAGTGGAAGAGCTGCTCTCCCGCTTTAGAGCTCTCCCTGAGTAGTACCGT
CCATTTCATTTGCCAAGATGGGTGGAGGAACCCTTGGCCCTCCGATTTTCAAACGGGCAT
CGTGTCTCATTGCCTATTCGTTTCTTTTTCTCGTGTCTGGACGACTGGAAGTGCAGTTTT
TTGCATATATATATTCAAAAGCACGCGGCACAGTTTTTTTTTTGACTAAGATAAGACATC
GTCTGTGGTTTACCCGGCCCGGCGTGTTCAGTTGATAAAAGGAAGTGTATCAGTTGATAA
AAGCGTAATTC