Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018977_T089
CDS Infomation	cds chromosome:B73_RefGen_v4:7:11473932:11479043:1 gene:Zm00001d018977 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA methyl transferase1 description: DNA methyl transferase1
Sequence	ATGGATGAATACATATTTGATAGTGATGACAGCATATTTTCTGATGATGTGCCAGTTAGG ATACTCAATAACTGGACACTGTACAATGCAGATTCCAGGCTTATATCTTTGGAATTGATC CCTATGAAATCAGGGGCAGAAAATGATGTGGTTATCTTTGGATCTGGTTTCATGAGAGAT GATGATGGCAGTTGCTGTTCTACAGCTGAGTCTGTGAAATCTTCGTCTTCCTCCAGCAAA GCTGACCAACTGGATGCAGGAATCCCTATTTATTTGAGCCCAATCAAAGAATGGATTATA GAGTTTGGTGGCTCAATGATTTGTATAACCATTCGGACTGATGTGGCCTGGTACAAGCTA CGCCAACCAACAAAACAATATGCTCCATGGTGTGAGCCTGTACTGAAAACAGCAAGGCTT GCTGTTAGCATCATTACCCTGTTGAAAGAGCAGAGTCGTGCCTCAAAGCTTTCTTTTGCT GATGTCATAAGAAAAGTAGCTGAATTTGACAAAGGAAACCCTGCATTTATATCTTCAAAC ATCACACTTGTTGAGAGATATATTGTGGTGCATGGACAGATAATACTCCAGCAGTTTGCA GATTTTCCAGATGAGACTATCCGTCGGAGTGCATTTGTCAGTGGTCTTTTATTGAAGATG GAACAGAGGAGGCATACAAAGTTAGTTATGAAGAAAAAAACTCAAGTGATGAGGGGAGAG AATCTGAATCCAAGTGCAGCAATGGGTCCAGCATCGAGGAAAAAAGCAATGCGTGCAACA ACAACCAGGCTCATCAACAGAATCTGGAGTGATTACTATGCACATCATTTCCCTGAAGAT TCCAAGGAGGGAGATGGAAATGAAACAAAAGAAATTGATGATGAACAAGAAGAAAATGAA GATGAGGATGCTGAAGATGAAGGGCAGATTGAAGAGAACATCTCAAAGACTCCTCCATCA ACACGGTCCCGGAAGTTGCTATCACAAACTTGTAAGGAAATCAGATGGGAAGGTGAAACA TCTGGGAAAACATTGTCTGGAGAAACTCTATATAAATGTGCTTATGTTAGGGAACTCAGA ATACCTGTTGGTGGAACAGTGGCTCTAGAAGATGATTCAGGAGACACAGTCATTTGTTTT GTTGAGTACATGTTCCAGAAAGTTGATGGTTCAAAAATGGTTCATGGGAGGATTCTGCAA AAAGGTTCACAGACAATTCTTGGCAATGCGGCAAATGAGAGGGAGGTTTTCTTAACTAAT GACTGCTTAGAATTCAAATTAGATGACATCAAGGAATTGGTAATGGTTGATATCCAATCA AGGCCTTGGGGTCACAAGTACAGAAAAGAGAATTCTGAAGCTGATAAAGTTGAGCAGGTC AAAGCAGAAGAGAGAAAGAAAAAGGGCCAGCCCATGGTATATTTCTGCAAAAGCTTGTAC TGGCCTGAGAAGGGTGCCTTCTTTGCCCTCTCCCGAGATAAAATGGGTCTTGGTAGTGGT TTATGTAGTTCTTGTGATAATATAGAGCCAGATTCTGATGAATTGAAAATATTCTCGAAG ACCAGCTTTGTCTACAGAAAGGTTACATATAATGTCAATGAGTTTTTATACATAAGACCT GATTTTTTTGCTGAAGATGAGGATCGTGCAACCTTCAAGGCTGGCCGAAATGTGGGTCTA AAGCCCTATGCAGTTTGTCAAATATTGTCCATCCCTGAAGGGGCTGGATCTAAAAAACTC AATCCAGCATCAGCAAATATCAGTGCTAGAAGATTTTACAGACCAGATGACATTTCATCA GCCAAAGCCTATGCATCTGACATCAGAGAGGTCTACTATAGTGAGGATGTAATTGATGTG CCTGTGGATATGATAGAGGGAAAATGTGAGGTTAGAAAGAAGAACGATCTTGCAAGTTCA GACCTTCCAGTGATGTTTGAACATGTATTTTTCTGTGAACTTATATATGACCGTGCCAGT GGAGCTCTCAAGCAGTTGCCTCCAAATGTTAGGTTTATGTCTATGGTGCAAAGGACAAGT GCGTTGAAAAAGAACAAAGGAAAGCAGATCTGTGAGCCTGATCAAATAGATTCAGGTAAA TGGTTGGATGTGCCTAAAGAGAACCGTCTAGCTACTCTTGACATTTTTGCTGGCTGTGGA GGTTTATCAGAAGGGCTGCAGCAAGCTGGTGTATCTTTTACAAAATGGGCGATTGAATAC GAAGAGCCTGCTGGTGAAGCATTTAATAAAAATCATCCAGAGGCTGTGGTCTTTGTAGAT AACTGCAATGTGATTCTAAAGGCAATTATGGATAAATGTGGGGATACTGATGATTGTGTT TCAACTTCTGAAGCTGCTGAACAAGCAGCAAAACTTCCAGAAGTGAACATTAATAATCTT CCAGTCCCTGGCGAAGTTGAATTCATAAATGGTGGTCCTCCGTGTCAGGGATTCTCTGGG ATGAATAGATTCAACCAAAGCCCATGGAGTAAAGTTCAGTGTGAGATGATTCTAGCATTC CTCTCATTCGCTGAGTATTTCCGTCCCAGATTCTTTCTGTTAGAAAATGTTCGGAACTTT GTTTCCTTCAACAAAGGGCAGACCTTCCGTTTGGCAGTTGCATCTCTTCTGGAGATGGGA TACCAGGTATTTCTGTTAATTCATTATCTGCTAAGACCTATAGCTTACACTTTTTATGGT GGTTTAAATCTGTATACTCAGAAATTGTTTGCCATTTGGTTAGGTCCGGTTTGGAATTCT AGAAGCAGGGGCTTTTGGTGTTGCCCAGTCCAGGAAAAGGGCGTTTATTTGGGCTGCTGC ACCTGGAGAGATGCTTCCTGA

Peptide Sequence

PEP ID	Zm00001d018977_P089
PEP Infomation	pep chromosome:B73_RefGen_v4:7:11473932:11479043:1 gene:Zm00001d018977 transcript:Zm00001d018977_T089 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA methyl transferase1 description: DNA methyl transferase1
Sequence	MDEYIFDSDDSIFSDDVPVRILNNWTLYNADSRLISLELIPMKSGAENDVVIFGSGFMRD DDGSCCSTAESVKSSSSSSKADQLDAGIPIYLSPIKEWIIEFGGSMICITIRTDVAWYKL RQPTKQYAPWCEPVLKTARLAVSIITLLKEQSRASKLSFADVIRKVAEFDKGNPAFISSN ITLVERYIVVHGQIILQQFADFPDETIRRSAFVSGLLLKMEQRRHTKLVMKKKTQVMRGE NLNPSAAMGPASRKKAMRATTTRLINRIWSDYYAHHFPEDSKEGDGNETKEIDDEQEENE DEDAEDEGQIEENISKTPPSTRSRKLLSQTCKEIRWEGETSGKTLSGETLYKCAYVRELR IPVGGTVALEDDSGDTVICFVEYMFQKVDGSKMVHGRILQKGSQTILGNAANEREVFLTN DCLEFKLDDIKELVMVDIQSRPWGHKYRKENSEADKVEQVKAEERKKKGQPMVYFCKSLY WPEKGAFFALSRDKMGLGSGLCSSCDNIEPDSDELKIFSKTSFVYRKVTYNVNEFLYIRP DFFAEDEDRATFKAGRNVGLKPYAVCQILSIPEGAGSKKLNPASANISARRFYRPDDISS AKAYASDIREVYYSEDVIDVPVDMIEGKCEVRKKNDLASSDLPVMFEHVFFCELIYDRAS GALKQLPPNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKWLDVPKENRLATLDIFAGCG GLSEGLQQAGVSFTKWAIEYEEPAGEAFNKNHPEAVVFVDNCNVILKAIMDKCGDTDDCV STSEAAEQAAKLPEVNINNLPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAF LSFAEYFRPRFFLLENVRNFVSFNKGQTFRLAVASLLEMGYQVFLLIHYLLRPIAYTFYG GLNLYTQKLFAIWLGPVWNSRSRGFWCCPVQEKGVYLGCCTWRDAS

Transcript Sequence

Transcript ID	Zm00001d018977_T089
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:11473932:11479043:1 gene:Zm00001d018977 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA methyl transferase1 description: DNA methyl transferase1
Sequence	GGCGTGGAACACCATCCCAGAAAAATGTCTACATAAAAATCAGTGAAGCTGAGATTGCCA ATGACTATCCCCTTCCTGCATACTATAAGCCATTTAGCCAGGAAATGGATGAATACATAT TTGATAGTGATGACAGCATATTTTCTGATGATGTGCCAGTTAGGATACTCAATAACTGGA CACTGTACAATGCAGATTCCAGGCTTATATCTTTGGAATTGATCCCTATGAAATCAGGGG CAGAAAATGATGTGGTTATCTTTGGATCTGGTTTCATGAGAGATGATGATGGCAGTTGCT GTTCTACAGCTGAGTCTGTGAAATCTTCGTCTTCCTCCAGCAAAGCTGACCAACTGGATG CAGGAATCCCTATTTATTTGAGCCCAATCAAAGAATGGATTATAGAGTTTGGTGGCTCAA TGATTTGTATAACCATTCGGACTGATGTGGCCTGGTACAAGCTACGCCAACCAACAAAAC AATATGCTCCATGGTGTGAGCCTGTACTGAAAACAGCAAGGCTTGCTGTTAGCATCATTA CCCTGTTGAAAGAGCAGAGTCGTGCCTCAAAGCTTTCTTTTGCTGATGTCATAAGAAAAG TAGCTGAATTTGACAAAGGAAACCCTGCATTTATATCTTCAAACATCACACTTGTTGAGA GATATATTGTGGTGCATGGACAGATAATACTCCAGCAGTTTGCAGATTTTCCAGATGAGA CTATCCGTCGGAGTGCATTTGTCAGTGGTCTTTTATTGAAGATGGAACAGAGGAGGCATA CAAAGTTAGTTATGAAGAAAAAAACTCAAGTGATGAGGGGAGAGAATCTGAATCCAAGTG CAGCAATGGGTCCAGCATCGAGGAAAAAAGCAATGCGTGCAACAACAACCAGGCTCATCA ACAGAATCTGGAGTGATTACTATGCACATCATTTCCCTGAAGATTCCAAGGAGGGAGATG GAAATGAAACAAAAGAAATTGATGATGAACAAGAAGAAAATGAAGATGAGGATGCTGAAG ATGAAGGGCAGATTGAAGAGAACATCTCAAAGACTCCTCCATCAACACGGTCCCGGAAGT TGCTATCACAAACTTGTAAGGAAATCAGATGGGAAGGTGAAACATCTGGGAAAACATTGT CTGGAGAAACTCTATATAAATGTGCTTATGTTAGGGAACTCAGAATACCTGTTGGTGGAA CAGTGGCTCTAGAAGATGATTCAGGAGACACAGTCATTTGTTTTGTTGAGTACATGTTCC AGAAAGTTGATGGTTCAAAAATGGTTCATGGGAGGATTCTGCAAAAAGGTTCACAGACAA TTCTTGGCAATGCGGCAAATGAGAGGGAGGTTTTCTTAACTAATGACTGCTTAGAATTCA AATTAGATGACATCAAGGAATTGGTAATGGTTGATATCCAATCAAGGCCTTGGGGTCACA AGTACAGAAAAGAGAATTCTGAAGCTGATAAAGTTGAGCAGGTCAAAGCAGAAGAGAGAA AGAAAAAGGGCCAGCCCATGGTATATTTCTGCAAAAGCTTGTACTGGCCTGAGAAGGGTG CCTTCTTTGCCCTCTCCCGAGATAAAATGGGTCTTGGTAGTGGTTTATGTAGTTCTTGTG ATAATATAGAGCCAGATTCTGATGAATTGAAAATATTCTCGAAGACCAGCTTTGTCTACA GAAAGGTTACATATAATGTCAATGAGTTTTTATACATAAGACCTGATTTTTTTGCTGAAG ATGAGGATCGTGCAACCTTCAAGGCTGGCCGAAATGTGGGTCTAAAGCCCTATGCAGTTT GTCAAATATTGTCCATCCCTGAAGGGGCTGGATCTAAAAAACTCAATCCAGCATCAGCAA ATATCAGTGCTAGAAGATTTTACAGACCAGATGACATTTCATCAGCCAAAGCCTATGCAT CTGACATCAGAGAGGTCTACTATAGTGAGGATGTAATTGATGTGCCTGTGGATATGATAG AGGGAAAATGTGAGGTTAGAAAGAAGAACGATCTTGCAAGTTCAGACCTTCCAGTGATGT TTGAACATGTATTTTTCTGTGAACTTATATATGACCGTGCCAGTGGAGCTCTCAAGCAGT TGCCTCCAAATGTTAGGTTTATGTCTATGGTGCAAAGGACAAGTGCGTTGAAAAAGAACA AAGGAAAGCAGATCTGTGAGCCTGATCAAATAGATTCAGGTAAATGGTTGGATGTGCCTA AAGAGAACCGTCTAGCTACTCTTGACATTTTTGCTGGCTGTGGAGGTTTATCAGAAGGGC TGCAGCAAGCTGGTGTATCTTTTACAAAATGGGCGATTGAATACGAAGAGCCTGCTGGTG AAGCATTTAATAAAAATCATCCAGAGGCTGTGGTCTTTGTAGATAACTGCAATGTGATTC TAAAGGCAATTATGGATAAATGTGGGGATACTGATGATTGTGTTTCAACTTCTGAAGCTG CTGAACAAGCAGCAAAACTTCCAGAAGTGAACATTAATAATCTTCCAGTCCCTGGCGAAG TTGAATTCATAAATGGTGGTCCTCCGTGTCAGGGATTCTCTGGGATGAATAGATTCAACC AAAGCCCATGGAGTAAAGTTCAGTGTGAGATGATTCTAGCATTCCTCTCATTCGCTGAGT ATTTCCGTCCCAGATTCTTTCTGTTAGAAAATGTTCGGAACTTTGTTTCCTTCAACAAAG GGCAGACCTTCCGTTTGGCAGTTGCATCTCTTCTGGAGATGGGATACCAGGTATTTCTGT TAATTCATTATCTGCTAAGACCTATAGCTTACACTTTTTATGGTGGTTTAAATCTGTATA CTCAGAAATTGTTTGCCATTTGGTTAGGTCCGGTTTGGAATTCTAGAAGCAGGGGCTTTT GGTGTTGCCCAGTCCAGGAAAAGGGCGTTTATTTGGGCTGCTGCACCTGGAGAGATGCTT CCTGATTGGCCAGAGCCGATGCATGTGTTTGCTAGCCCTGAGCTGAAGATAACACTGCCT GATGGCCAATACTATGCAGCTGCAAGAAGCACTGCTGGTGGAGCGCCTTTCCGAGCGATT ACTGTTAGAGATACAATTGGGGATCTGCCTAAAGTGGGAAATGGTGCCAGCAAACTCACG CTTGAGTATGGAGGTGAGCCCGTGTCTTGGTTCCAGAAGAAGATAAGAGGGAATATGATG GTACTGAATGATCACATATCTAAGGAGATGAATGAGCTGAACCTAATAAGGTGCCAACAC ATTCCGAAACGGCCGGGTTGTGATTGGCATGACCTACCGGACGAGAAGGTTAAGCTGTCA AATGGGCAGATGGCTGACCTGATACCTTGGTGCCTGCCCAACACAGCCAAGAGGCACAAT CAGTGGAAAGGACTGTACGGGAGGCTGGACTGGGAAGGCAACTTCCCCACATCCGTCACT GATCCCCAGCCAATGGGCAAGGTCGGCATGTGCTTCCACCCTGATCAAGACAGGATCATC ACAGTCCGGGAATGTGCTCGGTCACAGGGCTTTCCTGACAGCTATGAATTTGCGGGCAAC ATCCAGAACAAGCACCGGCAGATTGGCAATGCCGTGCCCCCGCCTCTTGCCTATGCACTT GGGAGGAAGCTGAAGGAAGCCGTTGACAAGCGTCAGGAAGCCAGCGCAGGCGTGCCTGCA CCATGAGAAGTTTTCCTTCCATCAAACCATGACCCATGAAGCTAAGCGCTGAGGTCGTCC TTGAGGACCAGTTAATTTTGGTTTTATCAGTCTTAATGCACTCCTGAATGTATATGTTAG AGAAGTGTCGATTGCTGATTGTTACCCTGATTCAGGGTAGCGGTTATATCTAAAAACTT