Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018971_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:7:11075478:11078232:1 gene:Zm00001d018971 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:opaque endosperm2 description:Regulatory protein opaque-2
Sequence	ATGCCGCCGACGACCCATCATATCTATGGTTACTTATTATTGGGCATGGAGCACGTCATC TCAATGGAGGAGATCCTCGGGCCCTTCTGGGAGCTGCTACCACCGCCAGCGCCAGAGCCA GAGCCAGAGCGAGAGCAGCCTCCGGTAACCGGCATCGTCGTCGGCAGTGTCATAGACGTT GCTGCTGCTGGTCACGGTCATGGTGGCGGCGACATGATGGATCAGCAGCACGCCACAGAG TGGACCTTTGAGAGGTTACTGGAAGAGGAGGCTCTGACGACAAGCACACCGCCGCCGGTG GTGGTGGTGCCGAACTCTTGTTGCTCAGGCGCCCTAAATGTTGACCGGCCGCCGGTGATG GAAGAGGCGGTAATGATGGCGCCTGCGGCGGTGAGTAGTGCCGTAGTAGGGGACCCCATG GAGTACAATGCCATACTGAGGAGGAAGCTGGAGGAGGACCTCGAGGCCTTCAAAATGTGG AGGGCGGCCTCCAGTGTTGTGACCTCAGATCAACGTTCTCAAGGCTCAAACAATCACACT GGAGGTAGCAGCATCAGGAATAATCCAGTGCAGAACAAGCTGATGAACGGCGAAGATCCA ATCAACAATAACCACGCTCAAACCGCAGGCCTTGGCGTGAGGCTTGCTACTAGCTCTTCC TCGAGAGATCCTTCACCATCAGACGAAGACATGGACGGAGAAGTAGAGATTCTGGGGTTC AAGATGCCTACCGAGGAAAGAGTGAGGAAAAGAAAGGAATCCAATAGAGAATCAGCCAGA CGCTCGAGATACAGGAAAGCCGCTCACCTGAAAGAACTGGAGGACCAGGTAGCACAGCTA AAAGCCGAGAATTCTTGCCTGCTGAGGCGCATTGCCGCTCTGAACCAGAAGTACAACGAC GCTAACGTCGACAACAGGGTGCTGAGAGCGGACATGGAGACCCTAAGAGCTAAGGTGAAG ATGGGAGAGGACTCCCTGAAGCGGGTGATAGAGATGAGCTCATCAGTGCCGTCGTCCATG CCCATCTCGGCGCCGACCCCCAGCTCCGACGCTCCAGTGCCGCCGCCGCCTATCCGAGAC AGCATCGTCGGCTACTTCTCCGCCACAGCCGCAGACGACGATGCTTCGGTCGGCAACGGT TTCTTGCGACTGCAAGCTCATCAAGAGCCTGCATCCATGGTCGTCGGTGGAACTCTGAGC GCCACAGAGATGAACCGAGTAGCAGCAGCCACGCATTGCGCGGGGGCCATGGAGCTCATC CAGACGGCGATGGGATCCATGCCGCCGACCTCCGCCTCCGGATCTACACCGCCGCCGCAG GATTATGAGCTGCTGGGTCCAAATGGGGCCATACACATGGACATGTATTAG

Peptide Sequence

PEP ID	Zm00001d018971_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:7:11075478:11078232:1 gene:Zm00001d018971 transcript:Zm00001d018971_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:opaque endosperm2 description:Regulatory protein opaque-2
Sequence	MPPTTHHIYGYLLLGMEHVISMEEILGPFWELLPPPAPEPEPEREQPPVTGIVVGSVIDV AAAGHGHGGGDMMDQQHATEWTFERLLEEEALTTSTPPPVVVVPNSCCSGALNVDRPPVM EEAVMMAPAAVSSAVVGDPMEYNAILRRKLEEDLEAFKMWRAASSVVTSDQRSQGSNNHT GGSSIRNNPVQNKLMNGEDPINNNHAQTAGLGVRLATSSSSRDPSPSDEDMDGEVEILGF KMPTEERVRKRKESNRESARRSRYRKAAHLKELEDQVAQLKAENSCLLRRIAALNQKYND ANVDNRVLRADMETLRAKVKMGEDSLKRVIEMSSSVPSSMPISAPTPSSDAPVPPPPIRD SIVGYFSATAADDDASVGNGFLRLQAHQEPASMVVGGTLSATEMNRVAAATHCAGAMELI QTAMGSMPPTSASGSTPPPQDYELLGPNGAIHMDMY

Transcript Sequence

Transcript ID	Zm00001d018971_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:11075478:11078232:1 gene:Zm00001d018971 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:opaque endosperm2 description:Regulatory protein opaque-2
Sequence	CTTCAAGCAGCTAACATAATTAACTCATGGGTGCATAGAGATATGCCGCCGACGACCCAT CATATCTATGGTTACTTATTATTGGGCATGGAGCACGTCATCTCAATGGAGGAGATCCTC GGGCCCTTCTGGGAGCTGCTACCACCGCCAGCGCCAGAGCCAGAGCCAGAGCGAGAGCAG CCTCCGGTAACCGGCATCGTCGTCGGCAGTGTCATAGACGTTGCTGCTGCTGGTCACGGT CATGGTGGCGGCGACATGATGGATCAGCAGCACGCCACAGAGTGGACCTTTGAGAGGTTA CTGGAAGAGGAGGCTCTGACGACAAGCACACCGCCGCCGGTGGTGGTGGTGCCGAACTCT TGTTGCTCAGGCGCCCTAAATGTTGACCGGCCGCCGGTGATGGAAGAGGCGGTAATGATG GCGCCTGCGGCGGTGAGTAGTGCCGTAGTAGGGGACCCCATGGAGTACAATGCCATACTG AGGAGGAAGCTGGAGGAGGACCTCGAGGCCTTCAAAATGTGGAGGGCGGCCTCCAGTGTT GTGACCTCAGATCAACGTTCTCAAGGCTCAAACAATCACACTGGAGGTAGCAGCATCAGG AATAATCCAGTGCAGAACAAGCTGATGAACGGCGAAGATCCAATCAACAATAACCACGCT CAAACCGCAGGCCTTGGCGTGAGGCTTGCTACTAGCTCTTCCTCGAGAGATCCTTCACCA TCAGACGAAGACATGGACGGAGAAGTAGAGATTCTGGGGTTCAAGATGCCTACCGAGGAA AGAGTGAGGAAAAGAAAGGAATCCAATAGAGAATCAGCCAGACGCTCGAGATACAGGAAA GCCGCTCACCTGAAAGAACTGGAGGACCAGGTAGCACAGCTAAAAGCCGAGAATTCTTGC CTGCTGAGGCGCATTGCCGCTCTGAACCAGAAGTACAACGACGCTAACGTCGACAACAGG GTGCTGAGAGCGGACATGGAGACCCTAAGAGCTAAGGTGAAGATGGGAGAGGACTCCCTG AAGCGGGTGATAGAGATGAGCTCATCAGTGCCGTCGTCCATGCCCATCTCGGCGCCGACC CCCAGCTCCGACGCTCCAGTGCCGCCGCCGCCTATCCGAGACAGCATCGTCGGCTACTTC TCCGCCACAGCCGCAGACGACGATGCTTCGGTCGGCAACGGTTTCTTGCGACTGCAAGCT CATCAAGAGCCTGCATCCATGGTCGTCGGTGGAACTCTGAGCGCCACAGAGATGAACCGA GTAGCAGCAGCCACGCATTGCGCGGGGGCCATGGAGCTCATCCAGACGGCGATGGGATCC ATGCCGCCGACCTCCGCCTCCGGATCTACACCGCCGCCGCAGGATTATGAGCTGCTGGGT CCAAATGGGGCCATACACATGGACATGTATTAGGCACTGCGGGTTTCGTGATCGCTGGGA ACATTTTATTTGCAGGCGTCGCTGAATAAGGCTGGTTGTCTCGATCTCCCTTGACATGAA ATCCAAATAACTCACAATTAACCATGAGTGTTCCGTTTGGTCCC