Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018939_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:7:9874485:9879687:1 gene:Zm00001d018939 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ethylene-overproduction protein 1

Sequence

ATGAGGAGCAGCTTCCTGTCGGAGTCGCCGTGCGACGAGCAGCGCATCCATGGATATGGT
TTCAACCCGCAGTCATGGCTGCAGGTGGAGCGAGGGAAGCTGCCCAAGTCGTCCTACTCG
CCTTCCTCCATTGAGTCACTTATCAAGATTGCTGAGCCACATGTAGTGCCATTGTATAAG
CCTTTGGATTATGTTGAGGTGCTGTCAAGGATCCACGAGGAGCTTGAACAATGTAGGCCG
AGCGAGCTGCCAGGCCTGTACTTGGTCCAGTCCCAGGTGTTTCGGGGCCTTGGAGAAGCA
AAATTGCGCCAGAGGAGCCTCCACTCTGCCTGGCGTTGTGCAAGCAGCGTCCATGAGAAA
GTCATATTTGGGGCATGGTTGCGGTACGAGAAGCAGGGGGAGGAGATCATATCTGACGTC
CTTGCATCATGTCAGAAATGCTGTCGAGAGTTTGGTTTACTTGATGTTGCCTCTGAGATG
CCTGTGCGGAATTTTGAGGTAATTGGTTCATGGGAGACAGGCTCCTCGTCTCAAGTTTCT
TCCATGGTAACCTTCCAAGTACAGGATGGTAGGGTGACATGTGATAGGTGCAAGATTGCG
TCTTTGTCAATACCATTTTGCTCCATGCTTAATGGACCGTTCAATGAGTCACAGCTTGAG
CTTGTTGATTTGTCAGAGAATGGTATTTCGTTGGAGGGCATGAGAGCTGTTTCTGAGTTT
AGTTCTACATGTAGTTTAGGGGATCTTCCTGTGGAAATCTTATTGGAGATCCTGGTGTTT
GCAAACACATTTTGTTGTGACAGGCTAAAAGATGCTTGTGATAGGAAACTGGCTTCATTT
GTTTCAACAAGGCAGGATGCTGTTGAGCTCATGCCGTTGGCATTTGAAGAAAATGCGCCA
GTTCTTGCTGCTTCTTGCTTGCAAATTTTTTTACAGGAACTTCCCGATTGTCTAGCTGAT
GATCTAGTAATTAGCCTCTTCTTAGGTGCAACTGCACAACAACAACTTATCATGGTTGGA
CATGCATCCTTTTTGCTGTACTGCTTGCTTAGTGAAGTAGCAATGAACATTGATCCGAGG
ACAGAAACAACTGTATTATTGTTAGAGAAGCTTGTGCAGCTAGCAGTTACCCCTACTCAG
AAGCAAATAGCTTTTCATCAACTTGCATGCATTAGACTTTTGAGAAAGGAATATAGTGAA
GCTGAACACCAATTTGAGGTTGCCTTCTCTGCCGGTCATGTGTATTCAATTGCTGGTATT
GCTAGAGTCGCTGGCATTCAAGGCCAAAAGGCTTTGGCTTATGAGAAGCTCAGTTCAGTG
ATAACATCAAATTTGCCACTGGGGTGGATGTATCTGGAGAGGTCTTTGTATTCTGAAGGT
GATAGAAAGCTGGCAGACCTTGACAAAGCAAGCGAGCTGGATCCTACTCTCACTTACCCT
TACATGTATCGAGCTGCATCCTTGATGAGAAAAAAAGATGCTAAACATGCCTTAGAGGAA
ATTAACCGACTCTTGGGTTTCAAGTTAGCATTGGAGTGCCTGGAGCTACGGATCTGTCTA
TACCTGGCTCTTGAAGACTATAAGTCTGCTATCTGTGATATCCATGCGATTCTTACTCTT
TCACCTGATTATCGGATGTTGGAAGGACGTGTAGCTGCTTCCAAAATAGGCACTCTTCTT
GGTGCACATGTCGAGCAGTGGAATACGGCTGAGTGTTGGCTACAACTTTATGAGCGCTGG
TCATCAGTTGATGATATTGGCTCCCTTTCAGTGATCTATCGGATGCTTGAGTCAGATGCA
GCAAAAGGTGTCCTCTACTTTAGGCAATCTTTGCTGCTCCTTAGGTTGAACTGTCCCGAG
GCAGCGATGCGCAGTTTGCAATTGGCAAGGCATCATGCAGCAACTGAGCATGAACGACTA
GTATATGAGGGGTGGCTCTTATATGACACGGGGCACTATGGGGAGGCCCTACAAAAAGCG
GAAGAATCTATTTCCATTCAAAGATCATTTGAAGCTTTCTTTCTGAAAGCCTATGTTTTG
GCTGATTCAGGAGTTGATCCTTCTTATTCTGCGACAGTTATCTCACTTCTTGAAGATGCA
TTGAAATGCCCTTCAGACCGGCTTCGGAAGGGTCAGGCAGGCATTGAATAA

Peptide Sequence

PEP ID

Zm00001d018939_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:7:9874485:9879687:1 gene:Zm00001d018939 transcript:Zm00001d018939_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ethylene-overproduction protein 1

Sequence

MRSSFLSESPCDEQRIHGYGFNPQSWLQVERGKLPKSSYSPSSIESLIKIAEPHVVPLYK
PLDYVEVLSRIHEELEQCRPSELPGLYLVQSQVFRGLGEAKLRQRSLHSAWRCASSVHEK
VIFGAWLRYEKQGEEIISDVLASCQKCCREFGLLDVASEMPVRNFEVIGSWETGSSSQVS
SMVTFQVQDGRVTCDRCKIASLSIPFCSMLNGPFNESQLELVDLSENGISLEGMRAVSEF
SSTCSLGDLPVEILLEILVFANTFCCDRLKDACDRKLASFVSTRQDAVELMPLAFEENAP
VLAASCLQIFLQELPDCLADDLVISLFLGATAQQQLIMVGHASFLLYCLLSEVAMNIDPR
TETTVLLLEKLVQLAVTPTQKQIAFHQLACIRLLRKEYSEAEHQFEVAFSAGHVYSIAGI
ARVAGIQGQKALAYEKLSSVITSNLPLGWMYLERSLYSEGDRKLADLDKASELDPTLTYP
YMYRAASLMRKKDAKHALEEINRLLGFKLALECLELRICLYLALEDYKSAICDIHAILTL
SPDYRMLEGRVAASKIGTLLGAHVEQWNTAECWLQLYERWSSVDDIGSLSVIYRMLESDA
AKGVLYFRQSLLLLRLNCPEAAMRSLQLARHHAATEHERLVYEGWLLYDTGHYGEALQKA
EESISIQRSFEAFFLKAYVLADSGVDPSYSATVISLLEDALKCPSDRLRKGQAGIE

Transcript Sequence

Transcript ID

Zm00001d018939_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:9874485:9879687:1 gene:Zm00001d018939 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ethylene-overproduction protein 1

Sequence

GCAGGATCTGAATCCGAGCTCGCTCGCATCCACTATCTGCAGGCCCCACGCGCCCTGTTC
CTTCCTCCCGCTAACAATCGCCCTGTTCCCGGTTTGATCCGTTGAATTCTGCCCGGCGCG
CGGGGGCTTGCGGGTGCGCACCGGAGGCTGCATCTTTTCCCGGCCAAGATTCGGTCCGGT
GGGGCCGTTCTTGGCACGATTTCACGGGCCGTTTGGCCTTCCCTCGCCGGATTTGTTCCG
GCTCCAGGCACCAAATTCCAATCTTTTCCTGCTGCTGCTGCCTCTGCGACACTTTATTCT
TCTCCCCCAATTAGCGGCGGTTAGTGTGGATTCTGATTTGTAGGTTCATTTCCTGGTTTC
CTCCGTGAGCTTCTGCGGTTGGCGTGGTTACGCCAGTCCCTCGCGATTTACATCTGTGAT
TCGTTTGAAAATCTGGGAGTGTGGAGATTTGGGAGGTCTTCTCGCTCCTGTGCTCTATGA
GGAGCAGCTTCCTGTCGGAGTCGCCGTGCGACGAGCAGCGCATCCATGGATATGGTTTCA
ACCCGCAGTCATGGCTGCAGGTGGAGCGAGGGAAGCTGCCCAAGTCGTCCTACTCGCCTT
CCTCCATTGAGTCACTTATCAAGATTGCTGAGCCACATGTAGTGCCATTGTATAAGCCTT
TGGATTATGTTGAGGTGCTGTCAAGGATCCACGAGGAGCTTGAACAATGTAGGCCGAGCG
AGCTGCCAGGCCTGTACTTGGTCCAGTCCCAGGTGTTTCGGGGCCTTGGAGAAGCAAAAT
TGCGCCAGAGGAGCCTCCACTCTGCCTGGCGTTGTGCAAGCAGCGTCCATGAGAAAGTCA
TATTTGGGGCATGGTTGCGGTACGAGAAGCAGGGGGAGGAGATCATATCTGACGTCCTTG
CATCATGTCAGAAATGCTGTCGAGAGTTTGGTTTACTTGATGTTGCCTCTGAGATGCCTG
TGCGGAATTTTGAGGTAATTGGTTCATGGGAGACAGGCTCCTCGTCTCAAGTTTCTTCCA
TGGTAACCTTCCAAGTACAGGATGGTAGGGTGACATGTGATAGGTGCAAGATTGCGTCTT
TGTCAATACCATTTTGCTCCATGCTTAATGGACCGTTCAATGAGTCACAGCTTGAGCTTG
TTGATTTGTCAGAGAATGGTATTTCGTTGGAGGGCATGAGAGCTGTTTCTGAGTTTAGTT
CTACATGTAGTTTAGGGGATCTTCCTGTGGAAATCTTATTGGAGATCCTGGTGTTTGCAA
ACACATTTTGTTGTGACAGGCTAAAAGATGCTTGTGATAGGAAACTGGCTTCATTTGTTT
CAACAAGGCAGGATGCTGTTGAGCTCATGCCGTTGGCATTTGAAGAAAATGCGCCAGTTC
TTGCTGCTTCTTGCTTGCAAATTTTTTTACAGGAACTTCCCGATTGTCTAGCTGATGATC
TAGTAATTAGCCTCTTCTTAGGTGCAACTGCACAACAACAACTTATCATGGTTGGACATG
CATCCTTTTTGCTGTACTGCTTGCTTAGTGAAGTAGCAATGAACATTGATCCGAGGACAG
AAACAACTGTATTATTGTTAGAGAAGCTTGTGCAGCTAGCAGTTACCCCTACTCAGAAGC
AAATAGCTTTTCATCAACTTGCATGCATTAGACTTTTGAGAAAGGAATATAGTGAAGCTG
AACACCAATTTGAGGTTGCCTTCTCTGCCGGTCATGTGTATTCAATTGCTGGTATTGCTA
GAGTCGCTGGCATTCAAGGCCAAAAGGCTTTGGCTTATGAGAAGCTCAGTTCAGTGATAA
CATCAAATTTGCCACTGGGGTGGATGTATCTGGAGAGGTCTTTGTATTCTGAAGGTGATA
GAAAGCTGGCAGACCTTGACAAAGCAAGCGAGCTGGATCCTACTCTCACTTACCCTTACA
TGTATCGAGCTGCATCCTTGATGAGAAAAAAAGATGCTAAACATGCCTTAGAGGAAATTA
ACCGACTCTTGGGTTTCAAGTTAGCATTGGAGTGCCTGGAGCTACGGATCTGTCTATACC
TGGCTCTTGAAGACTATAAGTCTGCTATCTGTGATATCCATGCGATTCTTACTCTTTCAC
CTGATTATCGGATGTTGGAAGGACGTGTAGCTGCTTCCAAAATAGGCACTCTTCTTGGTG
CACATGTCGAGCAGTGGAATACGGCTGAGTGTTGGCTACAACTTTATGAGCGCTGGTCAT
CAGTTGATGATATTGGCTCCCTTTCAGTGATCTATCGGATGCTTGAGTCAGATGCAGCAA
AAGGTGTCCTCTACTTTAGGCAATCTTTGCTGCTCCTTAGGTTGAACTGTCCCGAGGCAG
CGATGCGCAGTTTGCAATTGGCAAGGCATCATGCAGCAACTGAGCATGAACGACTAGTAT
ATGAGGGGTGGCTCTTATATGACACGGGGCACTATGGGGAGGCCCTACAAAAAGCGGAAG
AATCTATTTCCATTCAAAGATCATTTGAAGCTTTCTTTCTGAAAGCCTATGTTTTGGCTG
ATTCAGGAGTTGATCCTTCTTATTCTGCGACAGTTATCTCACTTCTTGAAGATGCATTGA
AATGCCCTTCAGACCGGCTTCGGAAGGGTCAGGCAGGCATTGAATAACCTTGGTGGTGTC
TATGTTGATTGTGGAAAGTTAGATTCAGCAGCTGATTGCTATACAAGTGCATTGAAAATT
CGACACACTAGAGCCCATCAAGGTCTTGCTCGTGTACATTTTCTGAGGAACAACAGGGAA
GCTGCATATGAAGAGATGACAAAGTTGATAGAAAAAGCTAAAAACAATGCTTCGGCTTAT
GAGAAACGCTCAGAATATTGTGAACGAGAACAAACTATGACAGATTTGCAAACAGTGACC
CAATTGGATCCTTTGCGTGTTTATCCATACAGATATCGAGCAGCAGGTTGGATCAAATTG
AAACTTTTCTTCTGGTTTCTTGATAACATACAATAAAATTTGAGATTAATGCAGAAGTCA
GCATTGTACTTTACGTCTTCTTGATTTATGCTTTGCAAACCAATAAATCGTACCTTAAGA
TGCTGCATTATGCAATAATATCAGTGTCCATTTTCTTTGGTAGTTGTCTTCCTTTTTGAA
TAACTTCTAGCTGTTGCTAGTGGCCCCATGTTTTAGGGTTTAGAGTGTATTGACTGAAAT
GGAAATACTACGCTTCTTATATAAAATGTCTGATACTGTAGCCATGTTCAAATATAGCTT
GAATACTAAAACTTTGTTTTAAGCACAGTGCACCGAACTACTCATTTTTAATCTGTTTGC
CCTGTTGGATTACCATCTCTTTATTGCTCAACATGAAGTTCACCTCTATCCCCTGTTTGG
TTTGTGACCACAACGTGTCATGCCACAGTTTTTTGGCAGCTGTTTGGTTCGCTGCCACAA
CTATGGCGTGGCACACTTTGTTAGCACCATGTCCCATAGGCTCATATTCTTGCCAAACTT
TGCCACAAGTGGCTTGAATTTTCCTTTCCAAACTTCTGTGGCAGCCACAATTTGTCGATG
GTTTTGCGTGGCAAAATATGGCACCAATCAAACAGGTGCAAAGACTTGCCCTTTTTCTTG
GATTGTATCACTTTGCATAATTCCTTGACATACCTTGGTCGCAAGTTTGGACCTTGCACC
ACTTTGACTAGTGCAGCAGCAGAGAATCAAGTAGATTATGCTAATCTTAGAACCACATTG
TGCTAGGATGAAAATATGCACAGATGTATCAACCTCATCTGTGGAAACTCTTATACCTGC
AAAAGTACTCCTTATTCATGTCATGTCTTCGTGAAAGTGCTAGGATGAGTAACATGTTAG
ACAATGGTACATCTTATTCATGCCTTTCATGTATTTCTGTGCACAGCATATAATTGTGGT
TAAGACATTGTTTTGGTTTTGATTTTCACAGTGCTGATGGATAGCCACAAGGAGAATGAT
GCAATAGCGGAGCTCAGCCGTGCGATATCCTTCAAAGCGGACCTGCATTTGCTGCATCTC
CGTGCGGCTTTCCACGAGCACATTGGAGATGTACCCAGCGCTCTCCGTGATTGTAGAGCC
GCCCTCTCCTTGGACCCGAATCACCAGGAGATGTTGGAGCTTCAGAAACGTGTGAACAGC
CAAGAGCCCTGACACATTGTGGTGCTGTATTGTGTATTGTACACCACGACTCATGCCACT
TTGGTTTGCCTCGTGACAGACAGCCTTGACCTGATTCATTTTTTTTCGTTTTTCCGTTAA
TTAATTAATCAATCACTGTAATACGAAGTTTTCAGGAAGAAAGTAACAGAGAGCAAGAGA
GAGAACTAGTTATATGAAAGCAGGCATTGATAAAGCCTTTTTAACTCGATGCCTGTGGCC
TCTGTAGAAGTATTGTGCTAATCCCTGAACTGTATCTTGAAAAAGTGATTCGT