Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018937_T020
CDS Infomation	cds chromosome:B73_RefGen_v4:7:9815191:9822807:1 gene:Zm00001d018937 gene_biotype:protein_coding transcript_biotype:protein_coding description:MMS19 nucleotide excision repair protein homolog
Sequence	ATGCTTTCTTTTCATGTAGTGGAAGTTGTCATGAAGCTGTTTCCAGATCCATCTGGTTTG GCAGCACAGTTTGCAGGGGACGTTTTTGAGATTCTGAGCAAGTATTTTCCTGTCTACTTC ACACACGGAGTGGGTAATGGTTTGGACACTACACGGGAAGACCTCTCTAGAGCATTGATG CACGCTTTTTGTTCAACCCAATATTTTGAGCCTTTTGTCATCCCTTTGCTTCTTGACAAA CTTTCTTCCTCTCTTCCATTGGCAAAGATTGATTCCTTAAAATATTTGGACAAATGCATT CGCTTCTATGGAGCTGATAGAATGGTTAGACATGCATCAGCTGTTTGGTACAAGTTGAAA GAAGTGATTTTTAACCTTTCTTCAGATCAATTATTAATATCAGAGGCTCTGAATTGTTTG AAGACTGCTATTATGTATACTGATTCTTCTGATAAAGATCTTTTCATTAATTTGATCTTG TTGGATGAGGATATTGTGAACAAGATCCACTCTGTATCAAGCGTGGAAAAGACCATATTG AGTTCATTAGAGGACCTGGCCCAACTGCATGCACTTGGAAGTGTTATTTCTATCCTTGCT GAATCGTCTACATATTTCTGTACTAGAGTTCTTCAAGAGCACTTTGCACACTTGGTAGAT ATTGTGGGAACCAAAGCTGACTATGAATCCTGGCAGTTGAATAATTGTAATGGATCATCT TCTGCTCCTGTCAACTATGGAGCACTCTATTTATCTGTTCAATTGCTTTCATCCTGTAGA GAAGTGGCTTTGGTATCTTATGAAGATTTTTCTTCTGTTAAATTAGCAAAGGGTTCCTGG TGGCTTATCTTGCAGAAAAAGCTGGAGCAGTTAATCCATCTCCTTCGATCCATTTTTGCT ATAGCTTCTCAATCTATGCAGCCAAATTTCAGACAAGAATATGTCTCTTGTGCTGTGAAG GGCTTGCTAACACTAGCAACATTCCCGGAACAATGCTCGCCTCTGCCAGCAAATGCTTAT GAGGATATTCTGCTTATGTTCACGTCAATAATTATAAATAAGTTTGAAAATTTAGATCTG TGGAGATTGTCATTGAAAGCATTGGCTAGCATTGGTTCATCTATTGCCAAGTTCCATGCT TCTGAAAGGGAAGTAGTTTACTACAGAACGGTTGTTGACAAGATTGTTTCTTTGGCTGAA TCTTATGATACTTCAATGCCTCTCGGTCTAAGACTTGAAGCAAGTTATGAAGTTGGAACT GCTGGGTTGAACTATATGTTAAGAGTTGCGAAATCACTTGAAGTCGCTGTTGTCACCAAT ATTTCTGAATCTGAGGCTAATGGAAGAATGGAATGTGCTGACCATGTGGCCCATTTATTT GAGTGTTACTCTAACCGGGTCCTTCCATGGTTATTAGCTTCTGGTGGTGTCAATGAACTT GCATTGAGCTTTGCACTGCATCTATTGGATGAGACTGAGGATTTGACTGTGTTAGATAGA ATCAGCTCACAGGGCCTCCTTGACTCACTAATGACTGGGATGAAGCTTTTAGTTGGAGTA TGTACAGAGGAGCAACAATCACTTATTGTTCAGAAAGCACATAGCACAATATCTTCAATG CTCTCACTCCCAATGGAATTGATGACAGACCGTCTTTTGCCTGTAGATGAGTTAGTTCCT TTACATTCTGTTTCAGAAACAGCTCTCATCAGCATGTTTTCGTCGATTATAATAGGCCTT CGGCCTCAAACACCTGTACCAGATATGATGGTGATGATTAAACTCTTTACTGTCTTCCTA CTAAATGGGAAAATGCCAGCTGCTTATGCATTAGCTTCTATTTTCAATAAATATCTACAT AATCCAGAGTTTTCTCATGAGAATCAGATGGATAAAATACTTGATGATATTCTTGAGAGG TGTTTCTCAACTGTATTAGCCAACAGCTGCTCAAAGACATCTCAATCTTGTGCTGGCACT TCAGATGTTAATTTCTCAGATGTTTCGTCTAGAAACAAGCTTTCTAAGATTAATATCTTG TCTAGCTTGGCTTGGATTGGCAAAGGATTACTTATGAGAGGAGACGAGAAAGTGAAGGAC ATTTCAATGTTTCTTCTTAAGATCCTATTCTCAGATGAGATTTTGTCTACAGTTCCATCC CACCAGGAAGAACCTTATGGCGGTGATTCATCAGATACTTCTCTTGCAATATCTGCAGCT AGTGCATTCCATGTGATGATGAGTGATTCAGAAATGTGTCTAAATAAAAAATTTCATGCA AGAATAAAACCATTATACAAGCAGCGTTTCTTCTCAATAATGATGCCGATCTTCCTCTCC AAAATTAAAGAAACAACTGTGGTCACGACAAAATTGGCACTATACCGAGCTTTTGGGCAT ATCATTTCCAATGCTCCAGTACCAGCAGTTATAACTGAAGCACACCAGATTTTACTCGTG ATGGTTGATAGCTTAGCTAAATTAAGTATGGATGTTGGGGATAAGGATCTGGTGTACAGT TTGTTACTTGTCTTCTCTGGAATGTTGATGGATGAAAAAGGCAAAGAGTGCATTCTGGAC AACATCCAAATCACAATCAGCGTTCTTACTGAACTTGTTTCCTATCCTCACATGATGGTT GTGCGGGAGACAGCATTACAATGTTTAGTAGCCTTTTCGACGTTTCCTCACTCAAAGATT TATCCTGTGCGGCGAAAGGTTGTGCAGGCAGCAGTCAGGGCTCTCGACGATAAGAAACGG GCTGTTCGTCGAGTGGCTGTCCGATGCCGGCACACATGGCAGTCCTTCACTTAA

Peptide Sequence

PEP ID	Zm00001d018937_P020
PEP Infomation	pep chromosome:B73_RefGen_v4:7:9815191:9822807:1 gene:Zm00001d018937 transcript:Zm00001d018937_T020 gene_biotype:protein_coding transcript_biotype:protein_coding description:MMS19 nucleotide excision repair protein homolog
Sequence	MLSFHVVEVVMKLFPDPSGLAAQFAGDVFEILSKYFPVYFTHGVGNGLDTTREDLSRALM HAFCSTQYFEPFVIPLLLDKLSSSLPLAKIDSLKYLDKCIRFYGADRMVRHASAVWYKLK EVIFNLSSDQLLISEALNCLKTAIMYTDSSDKDLFINLILLDEDIVNKIHSVSSVEKTIL SSLEDLAQLHALGSVISILAESSTYFCTRVLQEHFAHLVDIVGTKADYESWQLNNCNGSS SAPVNYGALYLSVQLLSSCREVALVSYEDFSSVKLAKGSWWLILQKKLEQLIHLLRSIFA IASQSMQPNFRQEYVSCAVKGLLTLATFPEQCSPLPANAYEDILLMFTSIIINKFENLDL WRLSLKALASIGSSIAKFHASEREVVYYRTVVDKIVSLAESYDTSMPLGLRLEASYEVGT AGLNYMLRVAKSLEVAVVTNISESEANGRMECADHVAHLFECYSNRVLPWLLASGGVNEL ALSFALHLLDETEDLTVLDRISSQGLLDSLMTGMKLLVGVCTEEQQSLIVQKAHSTISSM LSLPMELMTDRLLPVDELVPLHSVSETALISMFSSIIIGLRPQTPVPDMMVMIKLFTVFL LNGKMPAAYALASIFNKYLHNPEFSHENQMDKILDDILERCFSTVLANSCSKTSQSCAGT SDVNFSDVSSRNKLSKINILSSLAWIGKGLLMRGDEKVKDISMFLLKILFSDEILSTVPS HQEEPYGGDSSDTSLAISAASAFHVMMSDSEMCLNKKFHARIKPLYKQRFFSIMMPIFLS KIKETTVVTTKLALYRAFGHIISNAPVPAVITEAHQILLVMVDSLAKLSMDVGDKDLVYS LLLVFSGMLMDEKGKECILDNIQITISVLTELVSYPHMMVVRETALQCLVAFSTFPHSKI YPVRRKVVQAAVRALDDKKRAVRRVAVRCRHTWQSFT

Transcript Sequence

Transcript ID	Zm00001d018937_T020
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:9815191:9822807:1 gene:Zm00001d018937 gene_biotype:protein_coding transcript_biotype:protein_coding description:MMS19 nucleotide excision repair protein homolog
Sequence	TGCAGCCCCATACAATGGGTGATCCATTTGTTTCTCCCAACGCCGTTCAATTATAGTTAT GATTTTCTTGAGTAAACTCTTCTTGCTTTGGACAACAAAGCTTTGATTGATCTTTTCCTT TGCACATTTCATCAATGCTTGGACCTCTAGCATAGCTGGCCAAAGCTAGCGCACAGGGGG ATCGAGCGCCAAAATCCAGCGCCAATTTGGACCGGGGAACTAAGCCCAACAAACCCTAGG TTAGGCGTCGCCCAGACGCCTACTGCGCCTAGGCGGACGCCATGCTCAAGTTTACCTGGG CGGCGCGGACGCCTAGCAAAACCTGTCGCCTGGACACCTAGGCGACACCTTTTAAACAAT GCTATCAGTACTACTAGGGCGAAAGCCTGAACCAATATAAACTCTATGTCCGAATCCTCA GATTCACCATTCGGAGTGAGTCCGCGCTAGCCTCCCCTCCCGAACACAAATTGTATTGTC CCTTGGTTTCTGGAACCACGACCAATATGTTATAGAACTTTGTGATCATATCTTCTTGCA ACCCCCTATGCACCAGGACCTGATCTCTTTGTTTTTTATTTACTAATTAGTGGTTAAGAA GAAACAAATTTAATAATATCTCACACCCGTAGACCTTGACCACCACCACCACCACTTCCA CCCACCCACCCTTGACCCTAGGCAATATGCTCAAGTGTGTAGTTGCATTTTCCTTAAGAA ATAGTAAGCACAATACCCATTACCTTCACAATGTGTTTTTTGAATCACGTATATCAATAT GATCCTGTTTCTTTGATGTAATTTAATTCTGATTTAGCTTAAATTGGACAAATACCTACC ACGAGCAAGGGCCAAGGGGTACTTTGCAAAGCATACCATGGGTATGGGAATTCAAAGCTA TTATAAACCTTTTTTTAGATAATGCTAGTTATTTGAGAGAATTCTGGTCATCATCACATC TGAGCTCATGGAAATTTAGTTTGTCTCACTGCCGGTTCATTTGTAAATTTGTAGTTACTG TTCTTTAGATTTATGCAGAGGCTAAATGTAAACACAAACTTAATTGATATTTATAGGATG GTGAACAGCTGTATGGGATCTGTGAAGCAATTGATGAAGAAAAGGATCCAGAGTGCTTGA TGCTTTCTTTTCATGTAGTGGAAGTTGTCATGAAGCTGTTTCCAGATCCATCTGGTTTGG CAGCACAGTTTGCAGGGGACGTTTTTGAGATTCTGAGCAAGTATTTTCCTGTCTACTTCA CACACGGAGTGGGTAATGGTTTGGACACTACACGGGAAGACCTCTCTAGAGCATTGATGC ACGCTTTTTGTTCAACCCAATATTTTGAGCCTTTTGTCATCCCTTTGCTTCTTGACAAAC TTTCTTCCTCTCTTCCATTGGCAAAGATTGATTCCTTAAAATATTTGGACAAATGCATTC GCTTCTATGGAGCTGATAGAATGGTTAGACATGCATCAGCTGTTTGGTACAAGTTGAAAG AAGTGATTTTTAACCTTTCTTCAGATCAATTATTAATATCAGAGGCTCTGAATTGTTTGA AGACTGCTATTATGTATACTGATTCTTCTGATAAAGATCTTTTCATTAATTTGATCTTGT TGGATGAGGATATTGTGAACAAGATCCACTCTGTATCAAGCGTGGAAAAGACCATATTGA GTTCATTAGAGGACCTGGCCCAACTGCATGCACTTGGAAGTGTTATTTCTATCCTTGCTG AATCGTCTACATATTTCTGTACTAGAGTTCTTCAAGAGCACTTTGCACACTTGGTAGATA TTGTGGGAACCAAAGCTGACTATGAATCCTGGCAGTTGAATAATTGTAATGGATCATCTT CTGCTCCTGTCAACTATGGAGCACTCTATTTATCTGTTCAATTGCTTTCATCCTGTAGAG AAGTGGCTTTGGTATCTTATGAAGATTTTTCTTCTGTTAAATTAGCAAAGGGTTCCTGGT GGCTTATCTTGCAGAAAAAGCTGGAGCAGTTAATCCATCTCCTTCGATCCATTTTTGCTA TAGCTTCTCAATCTATGCAGCCAAATTTCAGACAAGAATATGTCTCTTGTGCTGTGAAGG GCTTGCTAACACTAGCAACATTCCCGGAACAATGCTCGCCTCTGCCAGCAAATGCTTATG AGGATATTCTGCTTATGTTCACGTCAATAATTATAAATAAGTTTGAAAATTTAGATCTGT GGAGATTGTCATTGAAAGCATTGGCTAGCATTGGTTCATCTATTGCCAAGTTCCATGCTT CTGAAAGGGAAGTAGTTTACTACAGAACGGTTGTTGACAAGATTGTTTCTTTGGCTGAAT CTTATGATACTTCAATGCCTCTCGGTCTAAGACTTGAAGCAAGTTATGAAGTTGGAACTG CTGGGTTGAACTATATGTTAAGAGTTGCGAAATCACTTGAAGTCGCTGTTGTCACCAATA TTTCTGAATCTGAGGCTAATGGAAGAATGGAATGTGCTGACCATGTGGCCCATTTATTTG AGTGTTACTCTAACCGGGTCCTTCCATGGTTATTAGCTTCTGGTGGTGTCAATGAACTTG CATTGAGCTTTGCACTGCATCTATTGGATGAGACTGAGGATTTGACTGTGTTAGATAGAA TCAGCTCACAGGGCCTCCTTGACTCACTAATGACTGGGATGAAGCTTTTAGTTGGAGTAT GTACAGAGGAGCAACAATCACTTATTGTTCAGAAAGCACATAGCACAATATCTTCAATGC TCTCACTCCCAATGGAATTGATGACAGACCGTCTTTTGCCTGTAGATGAGTTAGTTCCTT TACATTCTGTTTCAGAAACAGCTCTCATCAGCATGTTTTCGTCGATTATAATAGGCCTTC GGCCTCAAACACCTGTACCAGATATGATGGTGATGATTAAACTCTTTACTGTCTTCCTAC TAAATGGGAAAATGCCAGCTGCTTATGCATTAGCTTCTATTTTCAATAAATATCTACATA ATCCAGAGTTTTCTCATGAGAATCAGATGGATAAAATACTTGATGATATTCTTGAGAGGT GTTTCTCAACTGTATTAGCCAACAGCTGCTCAAAGACATCTCAATCTTGTGCTGGCACTT CAGATGTTAATTTCTCAGATGTTTCGTCTAGAAACAAGCTTTCTAAGATTAATATCTTGT CTAGCTTGGCTTGGATTGGCAAAGGATTACTTATGAGAGGAGACGAGAAAGTGAAGGACA TTTCAATGTTTCTTCTTAAGATCCTATTCTCAGATGAGATTTTGTCTACAGTTCCATCCC ACCAGGAAGAACCTTATGGCGGTGATTCATCAGATACTTCTCTTGCAATATCTGCAGCTA GTGCATTCCATGTGATGATGAGTGATTCAGAAATGTGTCTAAATAAAAAATTTCATGCAA GAATAAAACCATTATACAAGCAGCGTTTCTTCTCAATAATGATGCCGATCTTCCTCTCCA AAATTAAAGAAACAACTGTGGTCACGACAAAATTGGCACTATACCGAGCTTTTGGGCATA TCATTTCCAATGCTCCAGTACCAGCAGTTATAACTGAAGCACACCAGATTTTACTCGTGA TGGTTGATAGCTTAGCTAAATTAAGTATGGATGTTGGGGATAAGGATCTGGTGTACAGTT TGTTACTTGTCTTCTCTGGAATGTTGATGGATGAAAAAGGCAAAGAGTGCATTCTGGACA ACATCCAAATCACAATCAGCGTTCTTACTGAACTTGTTTCCTATCCTCACATGATGGTTG TGCGGGAGACAGCATTACAATGTTTAGTAGCCTTTTCGACGTTTCCTCACTCAAAGATTT ATCCTGTGCGGCGAAAGGTTGTGCAGGCAGCAGTCAGGGCTCTCGACGATAAGAAACGGG CTGTTCGTCGAGTGGCTGTCCGATGCCGGCACACATGGCAGTCCTTCACTTAAGGGGAGT CTCTTTCGGTGGTGTCAGGTAGTCGGGGGAGGCAAGCACAAAAAACTGGTCTTACTGGGC GATCCTGTTGGGAGTCGATGAGTGTACATGGTCGGTTTGCATGCTCCACTGTTGTGGTTG TTTCAACTTGAGGTTTGAGCATTTCATAGGCTATTCACCTTTCTGTGCGGACAGGATCTA GAGCTGTCATTGTAAGGTGAGAGATACTGGGAGCGGGGTCTGCTGACGAGTTTATGTTCG AGACCTGGTCTTTGGATCAGCTGCTGCCAAGTTCCAGATGTTCGAAGTTCTCCGAAGAGC CATGGGGCCATGGGGAGGAATGTCCCTGGAAATTGGCCCTCAGTCTGGGTTGCCAGCTCT TGTGCCCTTTTCTTTTCCTTGATCCTGGACATTGCCTTGTGTGTCTGATACAGATCAGAA AACTGATGCAGGATCGCTTGGGAGTTGGGAATGTAACCTAAAGTCCCAGTATTCTTGGCC TCCCGATGTTGGAGAATTCAA