Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018916_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:9215296:9221211:-1 gene:Zm00001d018916 gene_biotype:protein_coding transcript_biotype:protein_coding description:PIF / Ping-Pong family of plant transposases
Sequence

ATGCCTCCCGTGAAGAAGTCCAAGAAGGGGAAGCGGAAATCCAAGGATGGCAAGCTCAAG
ATTGTCAGGGCGCGGGGCGCGCCGCCGGCGCTGCCGCCGGAGCTCCGCGCCCTCGACACC
GAGTGGTGGTACGCTTTCCTGAACAAGCAAGTCGAGCTAGAGCATGCTGTGCCTCCAGAT
GAGGGGGAAGCATTCAGGCACTTCTTCAGGACTTCAAGGAAGACTTTTGACTACATCTGC
TCCATTGTTAGGGAAGATCTGATCTCAAGGCCACCGTCTGGACTGATCAACATTGAGGGG
AGGCTGCTCAGTGTGGAGAAGCAAGTGGCAATTGCCATGAGGAGGCTTGCGTCCGGTGAT
TCCCAGGTGTCAGTAGGGACTGCTTTTGGTGTGGGCCAGTCTACTGTTTCACAAGTGACA
TGGAGATTTATCGAGTCGATGGAAGATAGGGCTAGGTATCATCTGGCATGGCCAAGCCAA
GAGAGACTTGAGCAGATCAAAGCTGTGCTGGAGGATGCTTATGGCCTTCCGAATTGTTGT
GGTGGTGTTGATGCCACCCACGTAATCATGACGCTTCCTGCTGTCGAGTCATCTGCAGAT
TGGTGTGATCATGCAAAGAACTACAGTATGTTCCTGCAAGGGATTGTTGATGATCAGATG
AGGTTTATTGATATTGTTACTGGTTGGCCTGGCAGCATGACATTCTCACGCCTGATGAAA
TGCTCTGGGTTTTTCAAGCTCTGTGAAGCTGGGGAACGTTTGAATGGCTCTGTCAAAGTT
TCAGCAGAGGGTGCAGAGATCAGGGAATACATTGCTGGTGACTCATGTTATCCTCTACTC
CCATGGCTTATGACTCCATTCGAAGGAAAACATCTGCCTGCCCCATTGCAAAACTTTAAT
GCCCGCCAAAAAGCTGCAAGGCTGCTTGGAACAAATGCCTTGGCGCGGCTGAAGGGATCC
TGGAGGATCTTACACAAAGTCATGTGGAGGCCTGACAAGAACAAGTTGCCAAGTATAATT
CTTGTTTGCTGTCTGCTTCACAATATACTCATAGACTGCCATGATGAATTGCTTCCGAGT
GTTCAACTTCCCGAACATCATGATACTGGCTATAATCGAGAAAACTGCGAGCAGGTGGAT
CCTAATGGCAAAGTGATGAGAGAAAACATTACAGCACATCTCCAACACTGTGAAGCTTCC
AAGTTTCTCTGCAACTGA

Peptide Sequence

PEP ID

Zm00001d018916_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:9215296:9221211:-1 gene:Zm00001d018916 transcript:Zm00001d018916_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:PIF / Ping-Pong family of plant transposases
Sequence

MPPVKKSKKGKRKSKDGKLKIVRARGAPPALPPELRALDTEWWYAFLNKQVELEHAVPPD
EGEAFRHFFRTSRKTFDYICSIVREDLISRPPSGLINIEGRLLSVEKQVAIAMRRLASGD
SQVSVGTAFGVGQSTVSQVTWRFIESMEDRARYHLAWPSQERLEQIKAVLEDAYGLPNCC
GGVDATHVIMTLPAVESSADWCDHAKNYSMFLQGIVDDQMRFIDIVTGWPGSMTFSRLMK
CSGFFKLCEAGERLNGSVKVSAEGAEIREYIAGDSCYPLLPWLMTPFEGKHLPAPLQNFN
ARQKAARLLGTNALARLKGSWRILHKVMWRPDKNKLPSIILVCCLLHNILIDCHDELLPS
VQLPEHHDTGYNRENCEQVDPNGKVMRENITAHLQHCEASKFLCN

Transcript Sequence

Transcript ID

Zm00001d018916_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:9215296:9221211:-1 gene:Zm00001d018916 gene_biotype:protein_coding transcript_biotype:protein_coding description:PIF / Ping-Pong family of plant transposases
Sequence

AGACTGCAGCAGGAGCGGAGCGGGCGGAGAGGTTCCGGGTTTTCGGGGTGGGGTTTGGGA
GATGCCTCCCGTGAAGAAGTCCAAGAAGGGGAAGCGGAAATCCAAGGATGGCAAGCTCAA
GATTGTCAGGGCGCGGGGCGCGCCGCCGGCGCTGCCGCCGGAGCTCCGCGCCCTCGACAC
CGAGTGGTGGTACGCTTTCCTGAACAAGCAAGTCGAGCTAGAGCATGCTGTGCCTCCAGA
TGAGGGGGAAGCATTCAGGCACTTCTTCAGGACTTCAAGGAAGACTTTTGACTACATCTG
CTCCATTGTTAGGGAAGATCTGATCTCAAGGCCACCGTCTGGACTGATCAACATTGAGGG
GAGGCTGCTCAGTGTGGAGAAGCAAGTGGCAATTGCCATGAGGAGGCTTGCGTCCGGTGA
TTCCCAGGTGTCAGTAGGGACTGCTTTTGGTGTGGGCCAGTCTACTGTTTCACAAGTGAC
ATGGAGATTTATCGAGTCGATGGAAGATAGGGCTAGGTATCATCTGGCATGGCCAAGCCA
AGAGAGACTTGAGCAGATCAAAGCTGTGCTGGAGGATGCTTATGGCCTTCCGAATTGTTG
TGGTGGTGTTGATGCCACCCACGTAATCATGACGCTTCCTGCTGTCGAGTCATCTGCAGA
TTGGTGTGATCATGCAAAGAACTACAGTATGTTCCTGCAAGGGATTGTTGATGATCAGAT
GAGGTTTATTGATATTGTTACTGGTTGGCCTGGCAGCATGACATTCTCACGCCTGATGAA
ATGCTCTGGGTTTTTCAAGCTCTGTGAAGCTGGGGAACGTTTGAATGGCTCTGTCAAAGT
TTCAGCAGAGGGTGCAGAGATCAGGGAATACATTGCTGGTGACTCATGTTATCCTCTACT
CCCATGGCTTATGACTCCATTCGAAGGAAAACATCTGCCTGCCCCATTGCAAAACTTTAA
TGCCCGCCAAAAAGCTGCAAGGCTGCTTGGAACAAATGCCTTGGCGCGGCTGAAGGGATC
CTGGAGGATCTTACACAAAGTCATGTGGAGGCCTGACAAGAACAAGTTGCCAAGTATAAT
TCTTGTTTGCTGTCTGCTTCACAATATACTCATAGACTGCCATGATGAATTGCTTCCGAG
TGTTCAACTTCCCGAACATCATGATACTGGCTATAATCGAGAAAACTGCGAGCAGGTGGA
TCCTAATGGCAAAGTGATGAGAGAAAACATTACAGCACATCTCCAACACTGTGAAGCTTC
CAAGTTTCTCTGCAACTGAGCTAAGTTAGCTTGTTGTTTTGCTGGGATTTTGATGATGCA
TCATTATTCCTTTTACCTTATGCAATTTCCCTTAGTTTCTGTTATTGTAGTGAGACTTTC
TGATTGCAATTCAGTAAAGATTCTCTAGAAATGGCATGGTTCAGTACTATAGAAAATAGC
TAGTTGGAAAATTACAAGGACTAGCCCTCATGCTTGGGTTTATGTTCTTCAGGATAATGC
CAGTCCTCATCATGCTGAGTGCCATGAAGTTGCATAATGTAACAAAATTCATGAATGATC
TGGTAACTGGTATCTTATTTTTTGAATGATTTGATATCTTAAGTTAGGTTGGTTTATAAG
GTCCCAGTTTATATGATGAGACCTTTATTGTTGGAGAGGGCTTGAACTTGATTGCATGAA
TTCCATACCATGATAAATGTGCAACAGGCAGGTCCAGAATTTTGTGGCGTTACCAGATAT
AGCAGGAATTGCATAACCTGACAAAGGTACATTAAGTTGATCTAGTAAAGGTTGCATGAT
CTTGATTTGGTTATAAGAAATGTGGATGAGAGGAAACAAACTTTTGTTTAGTTTCATGAT
TAGAATTAACTGGATTGCGATGATAGAATCTGTTAAAGATACAATAATGATAGTTCCCTA
CTCTTATCTTACATTGTTCTCAATCGTGATTTGTAATTTCTATCAAGAACTAAAATTGAA
TCTTCTTTGATGGAGCTCTGTAAATGCTTCAAGCGATGTTTAATAGTTTTATTAATCAGC
TTCAGAAAACCTTTTTCGCAAATGAGCTGGCTCCATAAAACTAATGTGGGCTTCTGAGGT
TGCTTTCGATAATTTTGCTTGGTAAATCATGAGATTTGAAAATGTTTTTATCCTCTTTTG
CTCTTAAAATCTTTCGCATGAATGTTACACGAATATTTCATCAGAATGTTTCTTGAACAA
AACATGCTAATATCCAGTCCAATGAAACTGTTTTTACATTGCACTACTGATTTTTCAAGC
AAAAGGCAAGTATGCACTACTGATTTTACATTGCCCTGCATTTGAATCTTCAAACGTTCC
ACCAATCTGCATCTCCAATTTCACTGCCAATCTCTTTCAAACAACATTTTAAAGCATTTA
AACAATGGTTGCCAACACATGTGAAAACTTTTGGTGCATAGATATAGAGAAACAAGATAA
CAGTTAAAGGATATACAGGCAGCAGGTGAAAATGAAGAAAAGATTGACCTGCTCTCCTCT
GTTCTTTTCCTTTGTTAGGGCATGATCAAACCTTGCATTGTAAACCTTTTGCTCACGTAT
CTTCTAAATGGAAAATGATTATTGGAATGCATTCATTTGTAACTAAATCCATAAGTTTGT
TGCCTTGAGAAATTGGTGATGTGCTGATCCAGTAGGCTTTCTTATTATATGCTGTTCTTT
TAGGTACAGGTAACTAGGAGAGTTATCTTTTGCTGTTGACTGATGATTCCAGTCAGGTGA
AATTGAAGTGAGTCCATTCCACTATATGTGCTCACAGTTTTGCCTGCACTTCTCTGATTT
TGAGTGGTACTATAGTTGTCGCAGTCACGTAGGAGGTTGGTTTGCTTCTTTTGTGGTGAT
TCCCAATGCATCCAATACTTTTCTGCAGGCTTGCCTTAGCACAACAGAAAGTGAATGTCA
TTAAACTAACAGTGATTTCTTAGAAACCAAAGGCAATAAAGTAATAGCCTTTTCGACTAA
CCATTAGACAATCTGACCCTGAACCCACTGTTTTAAAGGCGTCTAGGCACCCAAACAATC
CGAGGAGCCTTGCTCGCCTACCTCGCCTAGGCGTCCAGGCAGTGTCCAATGCTTTGTCTC
GCCATACCGCCTTAAGAACCATGCCTGAACCCCTTCAGATCAACCACCGGTAACTTTGTC
CTCCTGTTTTTAGTTGGTGGAAACTTTAAATAGTCTGGGCAAACGAATTTGCTCAAACAC
CAAAATCGCAAGAATAAGCTCTATTGGATATTGATTTTATGCCTGTGAACAATATATTTT
AGGGGTATTTATATATGTTCTTGCGTTTGTAATTGACTAATTGTGTATACAAAATCTAAA
ATACCCTTGACTAGTTTGGTTAAAGTTGTTTGTCCGTGCAAGCACAGTTCAGTCATTTGC
TTTATATGGTTCTGCCACCACACAGTCTTCATAGACAGAGCTTCGTGTCCTGTGAATAGC
AAATTTCTCCTATTTCCTTTCTAACTTGGCTTCTCAACGAAGTTCACTCAATGACTTCGT
TTGATCTTTGAGGGAGAGAGTCTTCGTCAGAGAGACTTCATTGGTCTTGAGGCTTCGTCT
ATCCTTTGGTGCATGGGAATGATATGGCTTCATGTCTCATCCTTGGTCTTTTCTCAGTAT
GAAGCCAATTCTGAAAACAAGCATCCAATAGGAGGAAGCGATTGATGACTCCAAAACATC
GGGGATTGCGTTTGTACGATGTTAAATCCCCAACAGTAGCCTCTCGTGGGCAATGCTTCG
AAGGTCTTCTTGCGAAATTATCATTCCCGAGCGTCGAAGTTGGTTCTTGTAGTGTGAAAA
GTGAATTTCAAAGTTTTTAACGGTCAAGTTTGACCGAAGTCAAGTATAAAATGAAGGTGA
AGAGTTACTTTTGATCGAAGTCATCTATATATACCACACCTATGGGTCGTTATTTGCTAT
CGGTTCCCTTAAACGAGATGTCTTGTTGTTGGTTCGTGAAATGAAGCTTTGGGTGAAGTT
TGATTTCTTTCTAAGTTTGTGTAATGTGCCCAAGCGTCGCTTGTGTGAAGGTGTCTGGTA
CAGAGGAGCTTCCTTTTGTGGCTTCGACTAGATCCGAGGAAGATTTGGTAGATGCTAAGG
CTTTTGAGTTGGAGTTGGTGGATAATGAATTCAAGTCACTTAGGTTTGGCATGTCTTTGA
TGGACAAAGATTCCCTTGAACCATTTGTTTGGAGGAGATCGTTAGTAAGAGATCAACTTC
GTTTTCGTCATGCAAGGAAAATGGATCGAGGCTCATATGATAGTTAGTTTTGGTGTTTGA
TGATCAACATAACCATTTGTTCTAATATTACTTGCTAGTGTTTTGGATATAGTTCAAAGG
ATGTATGTGGACTTGGACGAAGGCAAAGTGGTGATTGAAATTATCACATCTCAAGTAAGA
CATTAAAAGACTTATTGAAGATATACAACAACATACAAGGGTCCAAGGCACAAGATGGAC
TCAAGATATACGGAGTTTTGGCTATTTCAATAAGTGTGTGGAATAGGATTGTCGTTCAAG
AATTCAATGTCATTCGATTGATTACAACCTTTGGAGGTCATAATTTTCCGCATATATACA
TGAATATGAATGCTTGAGCATGAAATAGGCTTATGCTTAATACGGATGTTTCCATACATT
TATACCTTCAGAAGCTCTGCACACAAGAATGCCACATGTGAGATTTGCAAAGGACCGACC
CCTATAGTAGTGGCATTGTTCGTCTATTTATAGGATGACCCAATATACATCTTTGTATGA
AATTACAGCTTTACCACTTAGTTATTACATAGTAACTCTTCGTAATTGAGAGAGTACAAT
CATGTTATTTTACAACCCTGACATACCATATAAGCCTTTTGTTCACCTTCGAGACCCTCT
TCGCTTTCCTTCTCTAAAGCTTTTTCCGATCACGCCGAAGCTATGCTTCTGTCTTCTTCA
GCTTGTCCAACGTTCGAAGATGGCCTTTTGCTTTGATTGATGTCCTTATCCTAAGAAAAT
ATCTAGACATTGATTTTGTTAGTATGAACCTTTGGCCAGAGGCCTTCTCCCAATAGTTGG
ATATTGTCTTTGTTTCCTATTGTACTTCTTTGATGCTTTTCTTTATTTTGAGCATATTTT
TGAAGTGTGGCTAGCCCCTTTTCCATGCACGATGCAGAACATATCCTCATGTTTTAGTGA
TTTTCGTCCACCGGTTATACCTCCTCTTTATCCTCTATGATTTGATCCATCTTTGGTGGA
TATTTTGTCACCATGATGATTTCATTTTTGGAAATTGCTTTCACAACGGTTTGTTGCATT
GCCGATGTGATTTATTTGATGAAAAAGGAAAGGTCTTCACTTGAAGCTTGTTAGTCTAGG
CCGATTGTGATTGTTTTTAATTGGTAGCTGGGAACTTGTTTCTTCTTCGACTCTTTTTCT
ATGGTCTATATCTGATTT