Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018907_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:7:8970966:8975572:1 gene:Zm00001d018907 gene_biotype:protein_coding transcript_biotype:protein_coding description:Folate-biopterin transporter 1 chloroplastic
Sequence

ATGCCTAGGTATCAAGTGGGCTCGACAAAGGGTGATTCAAGTAGTAGACGACACTCTGAG
GAGTGGCGGCAACCTAGCACAGATGATGTGCGCATGAGCAAGCCGGGGTCGAGATATTTC
ACGGCGTTTGGGGTGGATCTGTCCCCTGATAATATGGCAGTTGCCATTGTATATTTTGTG
CAAGGGGTTTTAGGTCTTGCACGGCTTGCTGTGAGCTTTTACTTGAAAGATGATCTTCAT
CTAGATCCAGCTGAGACTGCAGTGGTATCTGGTTTCTCGTCCTTGCCGTGGCTGATCAAG
CCCCTCTATGGCTTTATCAGTGATTCCATTCCACTCTTTGGATATCGAAGAAGGTCATAT
CTTTTTCTGTCAGGGTTACTTGGAGCACTTTCATGGAGCTTAATGGCCACAGTAGTGAGC
AGTAAATACAGCGCAGCATTCTCTATTCTTCTTGGCTCACTTTCTGTTGCCTTCTCAGAT
GTTGTAGTGGATTCTATGGTTGTTGAGAGAGCCCGTGGAGAATCTCAAAGTACATCTGGA
TCACTCCAGTCACTCTGTTGGGGATCTTCTGCCTTTGGAGGAATTGTGAGTGCTTATTTC
AGTGGTTCACTTGTGGATACTTATGGAGTAAGATTTGTCTTTGGTGTTACAGCGTTTTTA
CCCCTGATGACATCTGCTGTTGCAGTTCTTGTAAATGAACATGGCATTCCTTCTGGAGAA
CACAATACCTTTCTCTCTGGTTCCGGATTTGTTGAGAGCTCTAAGCAGCATGTCAGGCAG
CTTTGGGCTTCAGTAAAGCAACCTAACATTTTGTTGCCGACCTTGTTTATATTTCTTTGG
CAAGCAACACCGCAGTCAGATTCTGCTATGTTTTTCTTCATCACAAATAAGCTTGGATTC
ACTCCGGAGTTTCTAGGGCGCGTGAAGCTTGTAACCTCTTTTGCATCCCTGCTTGGTGTT
GGGCTCTACAACTATTTTCTGAAGGAAGTTGCTCTGAGGAAGATTTTTCTTGTGACAACC
ATTATAGGTTCAGCTCTTGGGATGACACAGGTGCTTCTTGTAACTGGGCTAAATCGGCAG
CTTGGGATCAGCGATGAGTGGTTTTCTATTGGTGATTCATTAATCATCACAGTCCTTGGT
CAGGCATCGTTTATGCCAGTCTTGGTGTTAGCTGCAAAGTTGTGCCCTCCAGGAATGGAA
GCCACTTTATTTGCAACTTTGATGTCCATTTCTAATGCTGGAAGTGTTACTGGTGGTCTG
GTTGGTGCTGGTCTAACTCGGATATTTGGGGTCACTAGGGATACCTTTGGGAACCTACCT
CTGTTGATTGTCGTCTGCAATCTTAGTTCATTGCTGCCCTTACCTCTTTTAGGTCTCCTT
CCAGAGGGATCAGGTGACACCGATAACGGAGAAACAAAAAATAACTGA

Peptide Sequence

PEP ID

Zm00001d018907_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:7:8970966:8975572:1 gene:Zm00001d018907 transcript:Zm00001d018907_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Folate-biopterin transporter 1 chloroplastic
Sequence

MPRYQVGSTKGDSSSRRHSEEWRQPSTDDVRMSKPGSRYFTAFGVDLSPDNMAVAIVYFV
QGVLGLARLAVSFYLKDDLHLDPAETAVVSGFSSLPWLIKPLYGFISDSIPLFGYRRRSY
LFLSGLLGALSWSLMATVVSSKYSAAFSILLGSLSVAFSDVVVDSMVVERARGESQSTSG
SLQSLCWGSSAFGGIVSAYFSGSLVDTYGVRFVFGVTAFLPLMTSAVAVLVNEHGIPSGE
HNTFLSGSGFVESSKQHVRQLWASVKQPNILLPTLFIFLWQATPQSDSAMFFFITNKLGF
TPEFLGRVKLVTSFASLLGVGLYNYFLKEVALRKIFLVTTIIGSALGMTQVLLVTGLNRQ
LGISDEWFSIGDSLIITVLGQASFMPVLVLAAKLCPPGMEATLFATLMSISNAGSVTGGL
VGAGLTRIFGVTRDTFGNLPLLIVVCNLSSLLPLPLLGLLPEGSGDTDNGETKNN

Transcript Sequence

Transcript ID

Zm00001d018907_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:8970966:8975572:1 gene:Zm00001d018907 gene_biotype:protein_coding transcript_biotype:protein_coding description:Folate-biopterin transporter 1 chloroplastic
Sequence

GGGAATGTCATGCCTAGGTATCAAGTGGGCTCGACAAAGGGTGATTCAAGTAGTAGACGA
CACTCTGAGGAGTGGCGGCAACCTAGCACAGATGATGTGCGCATGAGCAAGCCGGGGTCG
AGATATTTCACGGCGTTTGGGGTGGATCTGTCCCCTGATAATATGGCAGTTGCCATTGTA
TATTTTGTGCAAGGGGTTTTAGGTCTTGCACGGCTTGCTGTGAGCTTTTACTTGAAAGAT
GATCTTCATCTAGATCCAGCTGAGACTGCAGTGGTATCTGGTTTCTCGTCCTTGCCGTGG
CTGATCAAGCCCCTCTATGGCTTTATCAGTGATTCCATTCCACTCTTTGGATATCGAAGA
AGGTCATATCTTTTTCTGTCAGGGTTACTTGGAGCACTTTCATGGAGCTTAATGGCCACA
GTAGTGAGCAGTAAATACAGCGCAGCATTCTCTATTCTTCTTGGCTCACTTTCTGTTGCC
TTCTCAGATGTTGTAGTGGATTCTATGGTTGTTGAGAGAGCCCGTGGAGAATCTCAAAGT
ACATCTGGATCACTCCAGTCACTCTGTTGGGGATCTTCTGCCTTTGGAGGAATTGTGAGT
GCTTATTTCAGTGGTTCACTTGTGGATACTTATGGAGTAAGATTTGTCTTTGGTGTTACA
GCGTTTTTACCCCTGATGACATCTGCTGTTGCAGTTCTTGTAAATGAACATGGCATTCCT
TCTGGAGAACACAATACCTTTCTCTCTGGTTCCGGATTTGTTGAGAGCTCTAAGCAGCAT
GTCAGGCAGCTTTGGGCTTCAGTAAAGCAACCTAACATTTTGTTGCCGACCTTGTTTATA
TTTCTTTGGCAAGCAACACCGCAGTCAGATTCTGCTATGTTTTTCTTCATCACAAATAAG
CTTGGATTCACTCCGGAGTTTCTAGGGCGCGTGAAGCTTGTAACCTCTTTTGCATCCCTG
CTTGGTGTTGGGCTCTACAACTATTTTCTGAAGGAAGTTGCTCTGAGGAAGATTTTTCTT
GTGACAACCATTATAGGTTCAGCTCTTGGGATGACACAGGTGCTTCTTGTAACTGGGCTA
AATCGGCAGCTTGGGATCAGCGATGAGTGGTTTTCTATTGGTGATTCATTAATCATCACA
GTCCTTGGTCAGGCATCGTTTATGCCAGTCTTGGTGTTAGCTGCAAAGTTGTGCCCTCCA
GGAATGGAAGCCACTTTATTTGCAACTTTGATGTCCATTTCTAATGCTGGAAGTGTTACT
GGTGGTCTGGTTGGTGCTGGTCTAACTCGGATATTTGGGGTCACTAGGGATACCTTTGGG
AACCTACCTCTGTTGATTGTCGTCTGCAATCTTAGTTCATTGCTGCCCTTACCTCTTTTA
GGTCTCCTTCCAGAGGGATCAGGTGACACCGATAACGGAGAAACAAAAAATAACTGATTT
ACTGAGGGTTTTATCTCCATTGTTCTGGTACTCAAGTATAGCATACCACAGTGCCCAGCT
TCAACTCAGATATGGCCCATCGAGTTGAAATTCAAAAGGCCAGTAGAGAAATACGGAAAT
CACACTGGATTTAAGTTCAGTCGGTCACCGCCATCATCAGGCAGTATCTCCTGTGACTAT
TAACCTGTGTGATGGAAGTGATTCATTGATGATCTGCAAATGATCTATGGCGCACAGGTA
CTCACCTCTTTTTAGTTTCTAAGCTACCTTGTACACGAAGACAAGGTAGGTTTTATCTTT
CTCTAGAGTCTTTGAGTTTTTGTTGTTAATGCGACCCCATGAAAATTAGACTAGTGGTCA
AAGGCTATTAATTGGGGATTACCTTGCGAAGTCAAATGTATTGTGCCAAAAAAAGGAGGG
AGTATGTATACATTATTGGAAACCTAGAGTACGGAAATGTAAAGAAAAATACTTGCACAC
AGTTTGACTTGTCGTACA