Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018891_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:7:8478367:8494304:-1 gene:Zm00001d018891 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chloroplast RNA processing4 description: chloroplast RNA processing4
Sequence	ATGCTCGCGGCCCCCGCCGCGCTCCACCTCCTCCTCCCGGCGCCGCCGCTGCCGCCCCCG CACTACCACCACCACCACGTCGCCTTCCCCGCGCCGCCGCTCCACGCCTCGCTCCCGTGC TCACGCCGCCCGCGGAGGAGGCCGCCCAGGCATGGGGTCGCCAGGGCCTCCGCCGCAATG GCGGAGGAGGCCAGCAGCTCCGGACCGACCAAGTTCTCCGTGAGGATCCCCGTCGGCGAC CGCGAGATATTGGTGGAAACGGGCCACATTGGGAGGCAAGCGAGCGCTTCTGTAATGGTC ACTGATGGCGAAACGATTCTCTACTGTTCTGTCTGTCTGTCGGATACTCCAAACGACCCT TCTGACTTTTTCCCTTTATCGGTTCACTATCAAGAGCGCCTTTCAGCTGCTGGAAGAACT AGTGGCGGTTTCTTCAAACGAGAAGGCAAGACAAAAGACCATGAGGTTTTGGTTTGCAGA TTGATAGACAGGCCCCTACGACCTACTATGCCTAAGGGTTTCTACTTTGAAACTCAGATT CTATCCTGGGTCTTCAGTTATGATGGCATTCACTCCCCAGACTGCTTGGCTATCACAGCT GCTGGTATAGCCGTGGCCCTCTCTGAAATTCCAAATAAACAAACAATTGCTGGAGTAAGA ATTGGCCTAATTAACAACCAGTTTATTGTTAACCCAACTACTGAACAGATGGAGAATTCA GAGTTAGATTTGATGATGGCTGGGACTGATAGTGCCATTTTGATGATTGAGGGCTACTGT GATTTTCTGACTGAGGAGAAGCTGCTTGAAGCTGTCGAAGCTGGGCAGGTGGCAATTAGA GAAATCTGCAAAGCAATTGATGTTCTTGTTCAGAGCTGTGGGAAGAAGAAAATGGTCGAT GCTATCAGCCTACCGCCGCCTGAACTCTACAGGCATGTTGAAGATATTTCTGGAGATGAG TTGATGAAGGCATTACAAATAAAAGGAAAGATTCCCAGAAGAAAAGCTCTTTCAGCATTG GAAGAGAAAGTTATAAGTATACTTTCTGAGCAGGGCTATGTTTCCAAAGATGGCTTATCT GGAGGCACTGAAAGTTTGGCTGATATTGTTGAGGATGAGGATGAGGATGAAATTGTAGAT GACGGAGAAGTAGATGAAGGCGATGTTCACATCAAGCCGGTTTCAAGGAAGCCCCTTCAG CTATTTGCAGAAGTTGATGTGAAGCTAGTCTTCAAGGAAATTTCATCTAAATATTTACGA AAGCGCATTGTAGAGCGAGGAAAGCGAAGTGATGGACGGAGTCCTTGGGAACTTCGGCCC ATCAATTCTCAATGTGGCTTACTTCCAAGAGCTCATGGTAGTGCTCTGTTCACGAGGGGA GAAACACAGTCACTGGCTGTGGTCACTTTAGGTGGCTATCAGATGGCACAACGAATTGAC AACCTTGTTGATACGGAGGACTCAAAAAGCTTCTATCTTCAGTACTCATTTCCTCCATCA TGTGTTGGCGAAGTTGGTCGAATTGGAGCACCTAGCCGGAGAGAGATTGGACATGGGATG CTTGCAGAAAGGGCACTGGAGCCAATTTTACCTCTGGAAGAGGATTTTCCGTACACTATT CGTGTTGAGAGTACTATCACTGAAAGTAATGGTTCATCCAGCATGGCTTCTGTTTGTGGA GGTTGTTTAGCACTTCAAGATGCTGGGGTTCCTATAAAGTTTCCTGTTGCTGGAATTGCA ATGGGCCTGGTCCTTGATACACAAGAATTTGGTGGAGATGGTAGCCCACTTATACTTTCT GATATTACTGGAGCTGAAGATGCCTCTGGTGACATGGATTTGAAGATTGCTGGTAATGAA AGTGGCATATCTGCATTTCAGATGGACATTAAGGTAGTTGGGATAACTCTACCTGTGATG GAGAAAGCACTCCTTCAAGCTAGGGAAGGGAGACAACATATTCTAAATGAAATGTTGAAA TCTTCACCTCCACCCTCAAAAGCACTATCTCCACACGCTCCATTAATTCATGTTATGAAG GTCAAACCTAACAAGGTGAATTTAATAATTGGTTCTGGTGGAAAGACAATAAAAAGCATA ATTGAGGAGACTGGGGTAGATGCTATTGATACTGGAGATGATGGCACGGTAAAAATTACT GCAAGAGACCTAACAAGCTTAGAGAAGTCAAAAATTATAATAGCTAATCTTACCATGGTT CCAAAAGTAGGAGAAATATACAGGGACTGTGAGATCAAGTCAATAGCTCCATATGGTGCT TTTGTTGAAATTGCTCCAGGGCGTGAGGGTTTATGTCATATCAGTGAGTTAAGTTCGGGC TGGTTGGCCAAGGCTGAGGATGCTTTTAAAGTTGGAGATCGCATAGACGTCAAGCTTATT GAGATAAACGATAAGGGTCAACTTCGGCTAAGCTCTCGAGCTTTGCTTCCAGACGTGGAT TCCGAATCCAACATAGGTTCAACAAAAGAAAAGGTGCCACAAAAAGATGATGTCATAAAA ATGACAACAAAAAGACCAAGGCGCAAGAAACAGCCAGAGCCGTCTGGAGCTGAAAATGCC ACAACAAAGGCTCTTGCGAAAAGCGCTGCTGCTCCAGCTGGTTCAAAGGGCAGTGAAGCG TAG

Peptide Sequence

PEP ID	Zm00001d018891_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:7:8478367:8494304:-1 gene:Zm00001d018891 transcript:Zm00001d018891_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chloroplast RNA processing4 description: chloroplast RNA processing4
Sequence	MLAAPAALHLLLPAPPLPPPHYHHHHVAFPAPPLHASLPCSRRPRRRPPRHGVARASAAM AEEASSSGPTKFSVRIPVGDREILVETGHIGRQASASVMVTDGETILYCSVCLSDTPNDP SDFFPLSVHYQERLSAAGRTSGGFFKREGKTKDHEVLVCRLIDRPLRPTMPKGFYFETQI LSWVFSYDGIHSPDCLAITAAGIAVALSEIPNKQTIAGVRIGLINNQFIVNPTTEQMENS ELDLMMAGTDSAILMIEGYCDFLTEEKLLEAVEAGQVAIREICKAIDVLVQSCGKKKMVD AISLPPPELYRHVEDISGDELMKALQIKGKIPRRKALSALEEKVISILSEQGYVSKDGLS GGTESLADIVEDEDEDEIVDDGEVDEGDVHIKPVSRKPLQLFAEVDVKLVFKEISSKYLR KRIVERGKRSDGRSPWELRPINSQCGLLPRAHGSALFTRGETQSLAVVTLGGYQMAQRID NLVDTEDSKSFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERALEPILPLEEDFPYTI RVESTITESNGSSSMASVCGGCLALQDAGVPIKFPVAGIAMGLVLDTQEFGGDGSPLILS DITGAEDASGDMDLKIAGNESGISAFQMDIKVVGITLPVMEKALLQAREGRQHILNEMLK SSPPPSKALSPHAPLIHVMKVKPNKVNLIIGSGGKTIKSIIEETGVDAIDTGDDGTVKIT ARDLTSLEKSKIIIANLTMVPKVGEIYRDCEIKSIAPYGAFVEIAPGREGLCHISELSSG WLAKAEDAFKVGDRIDVKLIEINDKGQLRLSSRALLPDVDSESNIGSTKEKVPQKDDVIK MTTKRPRRKKQPEPSGAENATTKALAKSAAAPAGSKGSEA

Transcript Sequence

Transcript ID	Zm00001d018891_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:8478367:8494304:-1 gene:Zm00001d018891 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chloroplast RNA processing4 description: chloroplast RNA processing4
Sequence	GGCCGCGGAGGCGGAGGGCAGACAGGAGAGAGCGAGAAAGTGATAAGGTTCGTGGGTGCG TCGCCACTCGCCACCCTCACGTCTCCCGAGTGGACTCCCGCCTCCTTCCTTCCGTCCCTT CCCGGCTCACCGCCCTTCGCCTCACCCCGCGCCTCCTCCCTGTCCCCCCTCCAGAACTGT CCCCCACCGCCTCGAGATGCTCGCGGCCCCCGCCGCGCTCCACCTCCTCCTCCCGGCGCC GCCGCTGCCGCCCCCGCACTACCACCACCACCACGTCGCCTTCCCCGCGCCGCCGCTCCA CGCCTCGCTCCCGTGCTCACGCCGCCCGCGGAGGAGGCCGCCCAGGCATGGGGTCGCCAG GGCCTCCGCCGCAATGGCGGAGGAGGCCAGCAGCTCCGGACCGACCAAGTTCTCCGTGAG GATCCCCGTCGGCGACCGCGAGATATTGGTGGAAACGGGCCACATTGGGAGGCAAGCGAG CGCTTCTGTAATGGTCACTGATGGCGAAACGATTCTCTACTGTTCTGTCTGTCTGTCGGA TACTCCAAACGACCCTTCTGACTTTTTCCCTTTATCGGTTCACTATCAAGAGCGCCTTTC AGCTGCTGGAAGAACTAGTGGCGGTTTCTTCAAACGAGAAGGCAAGACAAAAGACCATGA GGTTTTGGTTTGCAGATTGATAGACAGGCCCCTACGACCTACTATGCCTAAGGGTTTCTA CTTTGAAACTCAGATTCTATCCTGGGTCTTCAGTTATGATGGCATTCACTCCCCAGACTG CTTGGCTATCACAGCTGCTGGTATAGCCGTGGCCCTCTCTGAAATTCCAAATAAACAAAC AATTGCTGGAGTAAGAATTGGCCTAATTAACAACCAGTTTATTGTTAACCCAACTACTGA ACAGATGGAGAATTCAGAGTTAGATTTGATGATGGCTGGGACTGATAGTGCCATTTTGAT GATTGAGGGCTACTGTGATTTTCTGACTGAGGAGAAGCTGCTTGAAGCTGTCGAAGCTGG GCAGGTGGCAATTAGAGAAATCTGCAAAGCAATTGATGTTCTTGTTCAGAGCTGTGGGAA GAAGAAAATGGTCGATGCTATCAGCCTACCGCCGCCTGAACTCTACAGGCATGTTGAAGA TATTTCTGGAGATGAGTTGATGAAGGCATTACAAATAAAAGGAAAGATTCCCAGAAGAAA AGCTCTTTCAGCATTGGAAGAGAAAGTTATAAGTATACTTTCTGAGCAGGGCTATGTTTC CAAAGATGGCTTATCTGGAGGCACTGAAAGTTTGGCTGATATTGTTGAGGATGAGGATGA GGATGAAATTGTAGATGACGGAGAAGTAGATGAAGGCGATGTTCACATCAAGCCGGTTTC AAGGAAGCCCCTTCAGCTATTTGCAGAAGTTGATGTGAAGCTAGTCTTCAAGGAAATTTC ATCTAAATATTTACGAAAGCGCATTGTAGAGCGAGGAAAGCGAAGTGATGGACGGAGTCC TTGGGAACTTCGGCCCATCAATTCTCAATGTGGCTTACTTCCAAGAGCTCATGGTAGTGC TCTGTTCACGAGGGGAGAAACACAGTCACTGGCTGTGGTCACTTTAGGTGGCTATCAGAT GGCACAACGAATTGACAACCTTGTTGATACGGAGGACTCAAAAAGCTTCTATCTTCAGTA CTCATTTCCTCCATCATGTGTTGGCGAAGTTGGTCGAATTGGAGCACCTAGCCGGAGAGA GATTGGACATGGGATGCTTGCAGAAAGGGCACTGGAGCCAATTTTACCTCTGGAAGAGGA TTTTCCGTACACTATTCGTGTTGAGAGTACTATCACTGAAAGTAATGGTTCATCCAGCAT GGCTTCTGTTTGTGGAGGTTGTTTAGCACTTCAAGATGCTGGGGTTCCTATAAAGTTTCC TGTTGCTGGAATTGCAATGGGCCTGGTCCTTGATACACAAGAATTTGGTGGAGATGGTAG CCCACTTATACTTTCTGATATTACTGGAGCTGAAGATGCCTCTGGTGACATGGATTTGAA GATTGCTGGTAATGAAAGTGGCATATCTGCATTTCAGATGGACATTAAGGTAGTTGGGAT AACTCTACCTGTGATGGAGAAAGCACTCCTTCAAGCTAGGGAAGGGAGACAACATATTCT AAATGAAATGTTGAAATCTTCACCTCCACCCTCAAAAGCACTATCTCCACACGCTCCATT AATTCATGTTATGAAGGTCAAACCTAACAAGGTGAATTTAATAATTGGTTCTGGTGGAAA GACAATAAAAAGCATAATTGAGGAGACTGGGGTAGATGCTATTGATACTGGAGATGATGG CACGGTAAAAATTACTGCAAGAGACCTAACAAGCTTAGAGAAGTCAAAAATTATAATAGC TAATCTTACCATGGTTCCAAAAGTAGGAGAAATATACAGGGACTGTGAGATCAAGTCAAT AGCTCCATATGGTGCTTTTGTTGAAATTGCTCCAGGGCGTGAGGGTTTATGTCATATCAG TGAGTTAAGTTCGGGCTGGTTGGCCAAGGCTGAGGATGCTTTTAAAGTTGGAGATCGCAT AGACGTCAAGCTTATTGAGATAAACGATAAGGGTCAACTTCGGCTAAGCTCTCGAGCTTT GCTTCCAGACGTGGATTCCGAATCCAACATAGGTTCAACAAAAGAAAAGGTGCCACAAAA AGATGATGTCATAAAAATGACAACAAAAAGACCAAGGCGCAAGAAACAGCCAGAGCCGTC TGGAGCTGAAAATGCCACAACAAAGGCTCTTGCGAAAAGCGCTGCTGCTCCAGCTGGTTC AAAGGGCAGTGAAGCGTAGTAGGATGTGGACAGCTTGGTGCCTTAATCAGACGATTGACT GGCCAAGCTAGGGATACATCCTTCAACCGACTATATGATGGTCATATGGCATGAGAAAGA GTTCAGACATGAGGGCACAACTGTCTAAACAGGAATATAATGGAGAAGAATTGGTTGATC GACCTCGATGTTAGACAGGTAGAGTGTCTGGTTGATGCGTTACACAAGGCGTGCGCCTAT CCAGCAGTAATGGTGCCCAGGACTGGATCGTCGCCATGGTTAGCGGAACAGATCCCGTAA CCACCATGGAAACTTGATTGTAATCGCCAGAAGTGTTGTATCGTTCTGTACTAACTACAT ATTCTTGC