Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018870_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:7864146:7869448:1 gene:Zm00001d018870 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline--tRNA ligase chloroplastic/mitochondrial
Sequence	ATGGCGTCGCTGCTGCGCCTCCCCTCGCTGCTGTCCCCGTCCAAGCCCCTGCTCCGGCGC CGGCTGCCGGCGGCGAGGCTCGCGGCATCCGCCGCATCCAGGGGTCAAGCCTCGGCGACC GCGGGCGCGGCGGCGCCGGCGGCCGCGGAGACCCGCGGCGGGGACAGGGAGGGGCAGGTC ACGCCGCGGTCCGCGGACTTCAACGCCTGGTACACGGACGTCATCGCCGCTGCCGAGCTC GCGGACTACGGGCCCGTGCGAGGGACCATGGTCATTCGCCCCTACGGATACGCCATCTGG GAGGCCATCCAGGATTATTTGAATGTCAAATTCAAGGAGACAGGGCACAGCAACATGTAC TTCCCTCAGTTCATTCCATACTCATTTATAGAGAAGGAAGCTAGTCATGTTGAAGGGTTT AGCCCGGAGCTTGCATTGGTCACCATTGGAGGAGGAAAAGAACTAGAGGAAAAGCTTGTG GTAAGACCAACAAGTGAGACCATTGTAAACCACATGTTCACCAAATGGATTCAGAGCTAT CGTGATCTTCCTCTCATGATAAACCAGTGGGCTAACGTGACAAGATGGGAAATGCGGACT AAACCATTCATCCGAACTCTTGAATTTTTATGGCAAGAAGGCCATACAGCCCATGCCACC CTTGAGGAGGCAGAGAAGGAGGCGATGCAGATGATTGATGTATATACCAAATTTGCCTTT GAGCATGCTGCAATACCAGTTATTCCAGGTAGAAAATCAAGAGTAGAAACATTTGCGGGT GCCAATCGGACCTACACTATAGAAGCTATGATGGGTGACAAGAAGGCCTTACAAGCTGGA ACTAGTCACAACCTTGGCCAAAACTTTTCACGAGCTTTTGGAACACAGTTTATGGATGAA AATGGTCAAATCGAACACGTCTGGCAGACCTCTTGGGCTATTAGTACTCGGTTTGTTGGT GGGATTATCATGACCCATGGCGATGATGCCGGTCTAATGCTTCCTCCAAGGATTGCACCC ATTCAGGTCATAATAGTACCAATATGGAAAAAGGGTGATGAGAAGGCTGTTGTTGTGGAA GCTGTAGATTCAGTTCAAAAAATACTCAAAGAAGCAGGAATTAGAGTTAAAGTGGACGAC TCAGAGCTGCGAACTCCTGGATGGAAATTCAATCACTATGAGATGAAAGGGGTTCCTGTA AGAATAGAGATAGGTCCACGTGATGTCACAAATAAGAGTGTTGTGGTTTCTAGGCGTGAT GTCCCTGGAAAGCAAGGAAAGGAGTTTGGAGTGTCTATGGAGCCTTCGATATTGGTGAAC CATATAAAGGGTCGTCTAGATGACATACAAGCATCCCTTTTACAGAAGGCCATAACATTC CGTGATAGTAACATTGTCGACGTAAGCTCATATGGCGAGCTGAAGGAAGCTATTTCTGAA GGAAAGTGGGCTAGAGGTCCTTGGTCAGCTAGCGATGCTGATGAGCTGAAAGTGAAAGAA GAGACCAGCGCCACCATCAGATGCTACCCATTCGAGCAGCCTGAGGGCACCAAGAAATGC TTCATGACTGGCAACCCCGCAGAGGAAGTCGCAATTTTCGCAAAGTCATACTAG

Peptide Sequence

PEP ID	Zm00001d018870_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:7864146:7869448:1 gene:Zm00001d018870 transcript:Zm00001d018870_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline--tRNA ligase chloroplastic/mitochondrial
Sequence	MASLLRLPSLLSPSKPLLRRRLPAARLAASAASRGQASATAGAAAPAAAETRGGDREGQV TPRSADFNAWYTDVIAAAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMY FPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTKWIQSY RDLPLMINQWANVTRWEMRTKPFIRTLEFLWQEGHTAHATLEEAEKEAMQMIDVYTKFAF EHAAIPVIPGRKSRVETFAGANRTYTIEAMMGDKKALQAGTSHNLGQNFSRAFGTQFMDE NGQIEHVWQTSWAISTRFVGGIIMTHGDDAGLMLPPRIAPIQVIIVPIWKKGDEKAVVVE AVDSVQKILKEAGIRVKVDDSELRTPGWKFNHYEMKGVPVRIEIGPRDVTNKSVVVSRRD VPGKQGKEFGVSMEPSILVNHIKGRLDDIQASLLQKAITFRDSNIVDVSSYGELKEAISE GKWARGPWSASDADELKVKEETSATIRCYPFEQPEGTKKCFMTGNPAEEVAIFAKSY

Transcript Sequence

Transcript ID	Zm00001d018870_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:7864146:7869448:1 gene:Zm00001d018870 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline--tRNA ligase chloroplastic/mitochondrial
Sequence	AATCCAGGCGGGCAATCCCCACAGGCCACAATGGCGTCGCTGCTGCGCCTCCCCTCGCTG CTGTCCCCGTCCAAGCCCCTGCTCCGGCGCCGGCTGCCGGCGGCGAGGCTCGCGGCATCC GCCGCATCCAGGGGTCAAGCCTCGGCGACCGCGGGCGCGGCGGCGCCGGCGGCCGCGGAG ACCCGCGGCGGGGACAGGGAGGGGCAGGTCACGCCGCGGTCCGCGGACTTCAACGCCTGG TACACGGACGTCATCGCCGCTGCCGAGCTCGCGGACTACGGGCCCGTGCGAGGGACCATG GTCATTCGCCCCTACGGATACGCCATCTGGGAGGCCATCCAGGATTATTTGAATGTCAAA TTCAAGGAGACAGGGCACAGCAACATGTACTTCCCTCAGTTCATTCCATACTCATTTATA GAGAAGGAAGCTAGTCATGTTGAAGGGTTTAGCCCGGAGCTTGCATTGGTCACCATTGGA GGAGGAAAAGAACTAGAGGAAAAGCTTGTGGTAAGACCAACAAGTGAGACCATTGTAAAC CACATGTTCACCAAATGGATTCAGAGCTATCGTGATCTTCCTCTCATGATAAACCAGTGG GCTAACGTGACAAGATGGGAAATGCGGACTAAACCATTCATCCGAACTCTTGAATTTTTA TGGCAAGAAGGCCATACAGCCCATGCCACCCTTGAGGAGGCAGAGAAGGAGGCGATGCAG ATGATTGATGTATATACCAAATTTGCCTTTGAGCATGCTGCAATACCAGTTATTCCAGGT AGAAAATCAAGAGTAGAAACATTTGCGGGTGCCAATCGGACCTACACTATAGAAGCTATG ATGGGTGACAAGAAGGCCTTACAAGCTGGAACTAGTCACAACCTTGGCCAAAACTTTTCA CGAGCTTTTGGAACACAGTTTATGGATGAAAATGGTCAAATCGAACACGTCTGGCAGACC TCTTGGGCTATTAGTACTCGGTTTGTTGGTGGGATTATCATGACCCATGGCGATGATGCC GGTCTAATGCTTCCTCCAAGGATTGCACCCATTCAGGTCATAATAGTACCAATATGGAAA AAGGGTGATGAGAAGGCTGTTGTTGTGGAAGCTGTAGATTCAGTTCAAAAAATACTCAAA GAAGCAGGAATTAGAGTTAAAGTGGACGACTCAGAGCTGCGAACTCCTGGATGGAAATTC AATCACTATGAGATGAAAGGGGTTCCTGTAAGAATAGAGATAGGTCCACGTGATGTCACA AATAAGAGTGTTGTGGTTTCTAGGCGTGATGTCCCTGGAAAGCAAGGAAAGGAGTTTGGA GTGTCTATGGAGCCTTCGATATTGGTGAACCATATAAAGGGTCGTCTAGATGACATACAA GCATCCCTTTTACAGAAGGCCATAACATTCCGTGATAGTAACATTGTCGACGTAAGCTCA TATGGCGAGCTGAAGGAAGCTATTTCTGAAGGAAAGTGGGCTAGAGGTCCTTGGTCAGCT AGCGATGCTGATGAGCTGAAAGTGAAAGAAGAGACCAGCGCCACCATCAGATGCTACCCA TTCGAGCAGCCTGAGGGCACCAAGAAATGCTTCATGACTGGCAACCCCGCAGAGGAAGTC GCAATTTTCGCAAAGTCATACTAGGCCCACTGTGTGTCCACTGTCAGAGATAAGAACAGC ATTTCCTTTTCAATTTTATAGGATTGTACCCTGTCTACCTAAGGTCCAGATTGATGACGG TTCATGGAACAGCATTGTGTGCTGCTGATATTTAAAATGTAAATTTGATAATCAATAGGT CAATTTTGTTCCACTAACACTGGAGGTAAGTTGTTTGCCTACTCAGTATCAAATGTTTCA AACAAGTTCCCCAATATGCTAAATCATGCAAGTTATCAC