Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018864_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:7:7675366:7687966:-1 gene:Zm00001d018864 gene_biotype:protein_coding transcript_biotype:protein_coding description: histone deacetylase
Sequence

ATGAGACCTCCTAGCAGTGGCAAAAAGACTGAGGTCTCCCATAGCGTGGGGAAATGTGGG
GTTTCTGATCAAGCTTGTCATGGCAAATGCCAAAGCTGTGGCATTGATGCAAAACCTTTT
TGTGCTGGAGTGAACGAAGTCTCCTTGTTGACTGGCAGTCACACTGATGTGGAGGCCTCA
AAAGAGAACCGTGGAGCATGCAGTTTGAACAATGATCGTGCTGATGCTCTAGAAGAAGAG
GCCAATGTTTCCACAGCTAGGATAGGTCATGTTGAGAGTGCTGACCCTGGTGGCTCTGTG
GGTGTAGAAAAGGAAATTTTCATGGCTGTTAATGAGGAGTCTGAGGGGGAGCAAGCTGGG
GCAACACTGGAGGATCTGTTTTTCTTTAATGGTGAAGAGGATGATGACAGTGATTGGGAA
CCTGCTAGTCGCCTTGTTGTGAATAGATGGTTTTGCTTGAACTGCACAATGCCAAATGTG
GACAAGATTACATATTGCATGAATTGCCGTGAGCTTCCAGGATCTGTTGTAGATGGATAT
GATGTCTTCAAAAAGCAAATTGCACAAACAGCTTTGTTATCTGCTGACACAGGGTTGCTG
CCAGTGTCTACGGCGATTGGTTTTGATGAAAGAATGCTGCTCCACAGTGAGCTAGAAGTT
AAACCAAATCCACATCCAGAAAGACCGGATCGCCTTCGCGCCATTGCTGCAAGTCTTGCT
GCTGCAGGGATCTTTCCCTCAAAATGTGCTTTGGTACCTCCTCGAGAAATCACGAAGGAG
GAACTTCTTATGGTTCATAGTCCAGACCACATTGAAAGTGTCGAGCAGACAAAGAACATG
CTTTACAGTTACTTCACTTCGGATACTTACGCAAATGGACATTCAGCATGTGCTGCCAAA
CTTGCAGCTGGATTATGTGCTGATCTTGCTAGTTTGATAGTATCTGGGCGTGTTCGCAAT
GGCTTTGCGCTGGTAAGACCTCCTGGGCATCATGCAGGGGTGAAGCAAGCAATGGGGTTT
TGTCTTCACAACAATGCAGCAGTAGCTGCGTTAGCTGCAAAAAGAGCAGGTGCCAAGAAA
GTCCTCATAGTTGACTGGGATGTGCACCATGGAAATGGCACACAAGAGATATTCGACGGG
GACAAAACAGTCTTGTACATATCATTACATCGTCATGAGGATGGAAACTTTTACCCTGGA
ACTGGAGCTGCTCATGAGATTGTGGGAGTTCTTGATGGTCAAGGATTCTCAGTTAATATA
CCTTGGAGCCGTGGTGGTGTTGGAGATGATGACTACATCTTTGCTTTTCAGACTGTGGTG
CTTCCAATAGCTTCAGAGTTTGCCGCAGACATCACTATAATATCTGCAGGATTCGATGCA
GCTAGAGGTGACCCTCTGGGTTGTTGTGACGTCACTCCAACTGGATACTCTTGGATGACA
TCCCTGCTAGCTGGTTCCTCAAATGGAAGATTGTTGGTGATACTTGAGGGAGGATACAAT
CTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGGTCCTACTTGGGGAGGGTCCC
AATCGTGCTTCATTTGTAGTTTCACCATCAAAAGAGGCCTTGAGTACTGTTTCTCAAGTC
CTGAAGATTCAACAACAGTTTTGGCCAGTTTTAGGTCCAACATACGCATCACTACAGGCG
CAGCAGGGGTCGGTTTCTTCCAATCATAGTAATGAGCTGAAGAAAAGGAAGCGTCCAGGA
GGAGGACCAGGGCCCTTCTGGTGGAAGATGGGAAGCAAAAGGCTTCTATACGAAGCGCTT
ATTGAGCCTCGCAGCCGTCCGAGGAAACTCAAGGGGTCAACTGGTTCAGCAGCGCCTTAG

Peptide Sequence

PEP ID

Zm00001d018864_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:7:7675366:7687966:-1 gene:Zm00001d018864 transcript:Zm00001d018864_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description: histone deacetylase
Sequence

MRPPSSGKKTEVSHSVGKCGVSDQACHGKCQSCGIDAKPFCAGVNEVSLLTGSHTDVEAS
KENRGACSLNNDRADALEEEANVSTARIGHVESADPGGSVGVEKEIFMAVNEESEGEQAG
ATLEDLFFFNGEEDDDSDWEPASRLVVNRWFCLNCTMPNVDKITYCMNCRELPGSVVDGY
DVFKKQIAQTALLSADTGLLPVSTAIGFDERMLLHSELEVKPNPHPERPDRLRAIAASLA
AAGIFPSKCALVPPREITKEELLMVHSPDHIESVEQTKNMLYSYFTSDTYANGHSACAAK
LAAGLCADLASLIVSGRVRNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAKRAGAKK
VLIVDWDVHHGNGTQEIFDGDKTVLYISLHRHEDGNFYPGTGAAHEIVGVLDGQGFSVNI
PWSRGGVGDDDYIFAFQTVVLPIASEFAADITIISAGFDAARGDPLGCCDVTPTGYSWMT
SLLAGSSNGRLLVILEGGYNLRSISSSATEVVKVLLGEGPNRASFVVSPSKEALSTVSQV
LKIQQQFWPVLGPTYASLQAQQGSVSSNHSNELKKRKRPGGGPGPFWWKMGSKRLLYEAL
IEPRSRPRKLKGSTGSAAP

Transcript Sequence

Transcript ID

Zm00001d018864_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:7675366:7687966:-1 gene:Zm00001d018864 gene_biotype:protein_coding transcript_biotype:protein_coding description: histone deacetylase
Sequence

CCCTAACCTTTTCACTGCTCCACAGAAGGCACACAGGCTCCCATCTTAATTTCCTCGCAG
CGCCGGCGCTCATCTTCCGCTTTCTCCCTTACTCGCGCTCAGCACGCAGGCGACGGCGTC
GGCGCTCAGGTCGGGCTCTGGGCGACGGCGTCATCGGCTTCTCCTCCCGCCTCTCTCCAG
TCGCCTCGCGCCCTCGCCTCCGGTCCTCCGCACACCGGCCGGTGACCCTGCGTGCGTGCC
TCTCTCTCTCTCTCCCCCTTCCCGCCTCCGGTGGATCGTCAACGCCGCCCGGCCCGGGTG
GCAGCACCGCGCGCGACCTGAGGGGTGAGGGCAGCGGGAGCCAGCAGCCGCTGCTCCACC
AAGGCGGTCGCGCCGCTTTTGGAGCGCTTATGCCCCCCGGTCCGCTGAGCGCTTAGTGCA
GTTTTTTTGGAACATGAGACCTCCTAGCAGTGGCAAAAAGACTGAGGTCTCCCATAGCGT
GGGGAAATGTGGGGTTTCTGATCAAGCTTGTCATGGCAAATGCCAAAGCTGTGGCATTGA
TGCAAAACCTTTTTGTGCTGGAGTGAACGAAGTCTCCTTGTTGACTGGCAGTCACACTGA
TGTGGAGGCCTCAAAAGAGAACCGTGGAGCATGCAGTTTGAACAATGATCGTGCTGATGC
TCTAGAAGAAGAGGCCAATGTTTCCACAGCTAGGATAGGTCATGTTGAGAGTGCTGACCC
TGGTGGCTCTGTGGGTGTAGAAAAGGAAATTTTCATGGCTGTTAATGAGGAGTCTGAGGG
GGAGCAAGCTGGGGCAACACTGGAGGATCTGTTTTTCTTTAATGGTGAAGAGGATGATGA
CAGTGATTGGGAACCTGCTAGTCGCCTTGTTGTGAATAGATGGTTTTGCTTGAACTGCAC
AATGCCAAATGTGGACAAGATTACATATTGCATGAATTGCCGTGAGCTTCCAGGATCTGT
TGTAGATGGATATGATGTCTTCAAAAAGCAAATTGCACAAACAGCTTTGTTATCTGCTGA
CACAGGGTTGCTGCCAGTGTCTACGGCGATTGGTTTTGATGAAAGAATGCTGCTCCACAG
TGAGCTAGAAGTTAAACCAAATCCACATCCAGAAAGACCGGATCGCCTTCGCGCCATTGC
TGCAAGTCTTGCTGCTGCAGGGATCTTTCCCTCAAAATGTGCTTTGGTACCTCCTCGAGA
AATCACGAAGGAGGAACTTCTTATGGTTCATAGTCCAGACCACATTGAAAGTGTCGAGCA
GACAAAGAACATGCTTTACAGTTACTTCACTTCGGATACTTACGCAAATGGACATTCAGC
ATGTGCTGCCAAACTTGCAGCTGGATTATGTGCTGATCTTGCTAGTTTGATAGTATCTGG
GCGTGTTCGCAATGGCTTTGCGCTGGTAAGACCTCCTGGGCATCATGCAGGGGTGAAGCA
AGCAATGGGGTTTTGTCTTCACAACAATGCAGCAGTAGCTGCGTTAGCTGCAAAAAGAGC
AGGTGCCAAGAAAGTCCTCATAGTTGACTGGGATGTGCACCATGGAAATGGCACACAAGA
GATATTCGACGGGGACAAAACAGTCTTGTACATATCATTACATCGTCATGAGGATGGAAA
CTTTTACCCTGGAACTGGAGCTGCTCATGAGATTGTGGGAGTTCTTGATGGTCAAGGATT
CTCAGTTAATATACCTTGGAGCCGTGGTGGTGTTGGAGATGATGACTACATCTTTGCTTT
TCAGACTGTGGTGCTTCCAATAGCTTCAGAGTTTGCCGCAGACATCACTATAATATCTGC
AGGATTCGATGCAGCTAGAGGTGACCCTCTGGGTTGTTGTGACGTCACTCCAACTGGATA
CTCTTGGATGACATCCCTGCTAGCTGGTTCCTCAAATGGAAGATTGTTGGTGATACTTGA
GGGAGGATACAATCTCCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGGTCCTACT
TGGGGAGGGTCCCAATCGTGCTTCATTTGTAGTTTCACCATCAAAAGAGGCCTTGAGTAC
TGTTTCTCAAGTCCTGAAGATTCAACAACAGTTTTGGCCAGTTTTAGGTCCAACATACGC
ATCACTACAGGCGCAGCAGGGGTCGGTTTCTTCCAATCATAGTAATGAGCTGAAGAAAAG
GAAGCGTCCAGGAGGAGGACCAGGGCCCTTCTGGTGGAAGATGGGAAGCAAAAGGCTTCT
ATACGAAGCGCTTATTGAGCCTCGCAGCCGTCCGAGGAAACTCAAGGGGTCAACTGGTTC
AGCAGCGCCTTAGACTTAGATGGGCAGTTTGCTGGCCGTTGATCTTCTAGACATGAACAG
GGTAGCTCGCTGACCGCGTTTCCTCAAGCAGAGTAGGCTGCGTTTACCTAGAAAACCTAG
TTTTGGCTGGTTACTTGCATGATGGTCGACCGTTTCAGATGGAGTTTGACAGCAAACCCG
TTGTGTTAACCATGCGTGGCGTATCAGCCGATGTTTCATGCATGCTACTGTCTTTTTCTT
TGGTTGGTTTCGTACCATAGATAGACGTGTGTAGCGACCATCGATGGAAAAAAACCTTGC
ACATCTGGAACGGCATGCATCTCAGTTATTAGCCCCTGCTGTTGCACATGCATTTTTTTT
TTGCGGATTTTCTGTGCGACTTGACTGCGACGTCTGATGTGCATTTGTTACACATCAGAC
GTCTGAAATGGATTTTACTGACTTTGAGGAGCTGGTGCATTTTCTATATGCATTTTTTAT
TGTTCAGCTACCAAGCTTAACATCCATCTCTGACCACATTCACTGACTCCGTCCTTGTGA
ACTTGAGGTGGCCAGAAGTTTGATCAGGACTGCTATTTTTTTTTTGCATGAAGCCATCTT
CTCTGGTTAGCTTGCTATATCATTTTTATAGCTTCGATCCCTACACCATTCCCAATTATT
CTGTCGTTC