Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018795_T099
CDS Infomation	cds chromosome:B73_RefGen_v4:7:5376644:5386316:1 gene:Zm00001d018795 gene_biotype:protein_coding transcript_biotype:protein_coding description:187-kDa microtubule-associated protein AIR9
Sequence	ATGGAGTATACACTAACCAAGGAGGACGTGGGGAGACACCTCAAATTTGTATATATCCCT GTTAACCTTGAAGGTCAGGAGGGTGAATCTGCTTGTGCGATAACAGATGTAGTTAAGAAA GCCCCTCCAAAAGTATTCAATCTAAAGATTGTTGGGGAATCTATGGAAGGAAGCAAGATA TCTGCCAGTGCTACTGTTACAGGTGGAACTGAAGGGTCCAGCAGGGTTCAATGGTACAAG GCATCTTCCTCTGAATTTAAGAATGAACATGAGCTTGAAGCCCTTACTCCGTCACGAGTT TCTAAGACATTCCGCATTCCTCTTGGTGCTGTTGGATATTATATCGTTGCAAAGTTTACA CCTGTGGCACCTGATGGTGAAGTCGGTGAACCAGCCTATGCTACATCAGATGGCCTTGTG GAAACACTACCACCCAGCCTGAACTTCTTAACAGTCACTGGTGAATTCTCTGAGGGTCAG ATATTAACAGCATCATATGGGTATATCGGAGGACATGAAGGAAATAGTTTATACAGCTGG CACCTTCATGAGGCTGAAGATGACGAAGGCACTCCACTTTCAGAGGCAACCGGTTTGCTA CAATACTGTGTTACAAAGGAAGCTGTTGGAAAGTTTGTTTCTTTCAAATGCACCCCTGTC AGAGATGATGATATTGTTGGTGAGGCAAGATCATTCATAGGAAAGGACAGAGTTACTCCA GGGATGCCGACATTACTTTCTCTTGAAGTAACTGGTGATGCAATTGAAGGAACAACTATG TTTGCCAGTAAAAGGTATTGGGGAGGAGAAGAAGGGGACACAATGTTCCGCTGGATACTG ACAAATTCTGATGGAACCGAGAAAGAAATTGAAGGAGCAACAAGTTCATCATACACCTTG AAATGCAATGACATTGGCTTCTACATATCTGTCTTGTGCAAGCCTGTTAGAAATGATGGA GTTGATGGTTCTTTAGTGTCGACTGAAGCGATTGGTCCTATTATACCAGGGCCACCAACA TGTCAATCTCTTGAACTAGCTGGCTCTATGGTTGAAGGTGGCCGTTTGACCTTTCATGCT GTGTATACAGGAGGTTTGCGGGGAAGTTGCATCCAAGAATGGTTCAGATTACATGATGAT GGGCACAAGGACAAGTTGACTGCTGATGAATGTCTAGACCTTGATCTAGCTGATATCGAT TGCCGGATTGAACTTATGTATACACCTGTACGAGAAGACGGAGTGCACGGGTTACCAAGG AGTGTTACTTCTGATACAATCTTACCTGGGGAGCCCAAGGGTGTCAATCTTATTCTACCT GAGTGTTTTGAGGACAATGAAATTTCTCCCATCAAAACCTATTTCGGTGGCAAGGAAGGC ACTGGCAAATATACATGGTTTCGAAATAAAGAGAAACTTGATAACTTGGAATTTGATCTG GTTGCTGAATCATCAGAAGTTGTTGGAGAAACCTTAAAATATAAGCCTTCATTGAATGAT GTTAGTTCCTATCTGATTCTTTATTGGGTTCCTACACGGCGTGATGGAAAGGTTGGTGAT CCTTTGATGGCTATCTCTGATGATCCGGTCATGGCAGCTTTTCCATCTGTTTCGGATGTT CACTTAGAGCAGAAAAGTTCAGATGTATATTGTGGACTAGGCATCTATTATGGTGGATAT GAGGGATTAAGCTTGTATAGATGGTACAGGGAATCTAGTGATGGAACTAGGCTTCACATA GATGGTGCTGATTCAGTCACATACGAAGTGACAGATGCTGATTACAGCTGCCGTCTACTG TTTGGTTATACTCCTGTTCGTTCAGATGGGATAAGTGGAGAAGAAAAACTCTCTGAACCA TCTGATGTAATTTTGCCAGCAATTTTGTGTAACCACATGTCTTTTCTTTCAGAACTACTC AAAATCGAGACACTCAATTTCAAGGGGAATCAGGTTGAAAGAGAAACACTGACTGCTGCT GAACAAATTCCGTACAGTGAGATTCAACAACATATATGGAAAAATTATAAGAAAGAGATG AAATATCAATGGTTTATTTCCAATGAATCAGGAGGCGATCAGTCTTTTGAACCATTGGCA ACCCAGTGTTCTCGCTCATACAAAGTGCGCTTTGAGGATATTGGTCGTTGCCTGAAATGC GAATGCTTTGTCACTGATGTATTTGGACGATCTAGTGAATTGGTATCCGCTGTGACTGCT CCTATTTTGCCAGGAAGGCCTAAAATTGAAAAGCTGGAGATTGAAGGAAGAGGTTTCCAC ACTGACCTATATGCCGTTCAGGGTACCTATAGCGGAGGCAAAGAAGGCAAGAGTAAAATA CAATGGCTCAGATCGATGGTTGGAAGCCCTGATCTTATCTCCATACCTGGCGAAACTGGA AGAACGTATGAAGCTAATGTTGATGATGTAGGGTATAGGCTTGTTGCAATTTATACACCT GTAAGAGAGGATGGAGTTGAGGGACAACCTGTTTCTGTTTCAACAGAACAGATTGCAGTT GAGCCTGAACTTTACAGGGAAGTGAAACAGAAGCTCGATGATGGTTCAGTCAAATTTGAG GTTCTGTGTGACAAGGACCGAACACCCAAAAAGGCACAAGTAATGGGCCATTTGGAGCGG AGGGTTTTGGAAGTCAACCGAAAGAGGATAAAAGTAGTAAAGCCTGGATCTAAGACATCA TTCCCGAGTACTGAAGTACGAGGAACCTACGCTCCACCGTTCCATGTCGAGCTGTATCGC AATGACCAGCACCGCTTCAAGATTGTTGTCGACGGTGATACTGAAGTTGACTTAATGGTG CAAACACGGCACATGCGAGACCGCATCATCCTCACGATCAGAGGCCTCGCCCAGAAGTTC AACAGCACCTCCCTCAACACACTTCTCAGGATCGAGTCATGA

Peptide Sequence

PEP ID	Zm00001d018795_P099
PEP Infomation	pep chromosome:B73_RefGen_v4:7:5376644:5386316:1 gene:Zm00001d018795 transcript:Zm00001d018795_T099 gene_biotype:protein_coding transcript_biotype:protein_coding description:187-kDa microtubule-associated protein AIR9
Sequence	MEYTLTKEDVGRHLKFVYIPVNLEGQEGESACAITDVVKKAPPKVFNLKIVGESMEGSKI SASATVTGGTEGSSRVQWYKASSSEFKNEHELEALTPSRVSKTFRIPLGAVGYYIVAKFT PVAPDGEVGEPAYATSDGLVETLPPSLNFLTVTGEFSEGQILTASYGYIGGHEGNSLYSW HLHEAEDDEGTPLSEATGLLQYCVTKEAVGKFVSFKCTPVRDDDIVGEARSFIGKDRVTP GMPTLLSLEVTGDAIEGTTMFASKRYWGGEEGDTMFRWILTNSDGTEKEIEGATSSSYTL KCNDIGFYISVLCKPVRNDGVDGSLVSTEAIGPIIPGPPTCQSLELAGSMVEGGRLTFHA VYTGGLRGSCIQEWFRLHDDGHKDKLTADECLDLDLADIDCRIELMYTPVREDGVHGLPR SVTSDTILPGEPKGVNLILPECFEDNEISPIKTYFGGKEGTGKYTWFRNKEKLDNLEFDL VAESSEVVGETLKYKPSLNDVSSYLILYWVPTRRDGKVGDPLMAISDDPVMAAFPSVSDV HLEQKSSDVYCGLGIYYGGYEGLSLYRWYRESSDGTRLHIDGADSVTYEVTDADYSCRLL FGYTPVRSDGISGEEKLSEPSDVILPAILCNHMSFLSELLKIETLNFKGNQVERETLTAA EQIPYSEIQQHIWKNYKKEMKYQWFISNESGGDQSFEPLATQCSRSYKVRFEDIGRCLKC ECFVTDVFGRSSELVSAVTAPILPGRPKIEKLEIEGRGFHTDLYAVQGTYSGGKEGKSKI QWLRSMVGSPDLISIPGETGRTYEANVDDVGYRLVAIYTPVREDGVEGQPVSVSTEQIAV EPELYREVKQKLDDGSVKFEVLCDKDRTPKKAQVMGHLERRVLEVNRKRIKVVKPGSKTS FPSTEVRGTYAPPFHVELYRNDQHRFKIVVDGDTEVDLMVQTRHMRDRIILTIRGLAQKF NSTSLNTLLRIES

Transcript Sequence

Transcript ID	Zm00001d018795_T099
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:5376644:5386316:1 gene:Zm00001d018795 gene_biotype:protein_coding transcript_biotype:protein_coding description:187-kDa microtubule-associated protein AIR9
Sequence	GGCAGAGAGGGACTAAGTAAAATCCGGTGGTTTAGAGAGAAGGAAAATGGTGAATTTCTT CTTGTGCTATCAGACAGCATGGAGTATACACTAACCAAGGAGGACGTGGGGAGACACCTC AAATTTGTATATATCCCTGTTAACCTTGAAGGTCAGGAGGGTGAATCTGCTTGTGCGATA ACAGATGTAGTTAAGAAAGCCCCTCCAAAAGTATTCAATCTAAAGATTGTTGGGGAATCT ATGGAAGGAAGCAAGATATCTGCCAGTGCTACTGTTACAGGTGGAACTGAAGGGTCCAGC AGGGTTCAATGGTACAAGGCATCTTCCTCTGAATTTAAGAATGAACATGAGCTTGAAGCC CTTACTCCGTCACGAGTTTCTAAGACATTCCGCATTCCTCTTGGTGCTGTTGGATATTAT ATCGTTGCAAAGTTTACACCTGTGGCACCTGATGGTGAAGTCGGTGAACCAGCCTATGCT ACATCAGATGGCCTTGTGGAAACACTACCACCCAGCCTGAACTTCTTAACAGTCACTGGT GAATTCTCTGAGGGTCAGATATTAACAGCATCATATGGGTATATCGGAGGACATGAAGGA AATAGTTTATACAGCTGGCACCTTCATGAGGCTGAAGATGACGAAGGCACTCCACTTTCA GAGGCAACCGGTTTGCTACAATACTGTGTTACAAAGGAAGCTGTTGGAAAGTTTGTTTCT TTCAAATGCACCCCTGTCAGAGATGATGATATTGTTGGTGAGGCAAGATCATTCATAGGA AAGGACAGAGTTACTCCAGGGATGCCGACATTACTTTCTCTTGAAGTAACTGGTGATGCA ATTGAAGGAACAACTATGTTTGCCAGTAAAAGGTATTGGGGAGGAGAAGAAGGGGACACA ATGTTCCGCTGGATACTGACAAATTCTGATGGAACCGAGAAAGAAATTGAAGGAGCAACA AGTTCATCATACACCTTGAAATGCAATGACATTGGCTTCTACATATCTGTCTTGTGCAAG CCTGTTAGAAATGATGGAGTTGATGGTTCTTTAGTGTCGACTGAAGCGATTGGTCCTATT ATACCAGGGCCACCAACATGTCAATCTCTTGAACTAGCTGGCTCTATGGTTGAAGGTGGC CGTTTGACCTTTCATGCTGTGTATACAGGAGGTTTGCGGGGAAGTTGCATCCAAGAATGG TTCAGATTACATGATGATGGGCACAAGGACAAGTTGACTGCTGATGAATGTCTAGACCTT GATCTAGCTGATATCGATTGCCGGATTGAACTTATGTATACACCTGTACGAGAAGACGGA GTGCACGGGTTACCAAGGAGTGTTACTTCTGATACAATCTTACCTGGGGAGCCCAAGGGT GTCAATCTTATTCTACCTGAGTGTTTTGAGGACAATGAAATTTCTCCCATCAAAACCTAT TTCGGTGGCAAGGAAGGCACTGGCAAATATACATGGTTTCGAAATAAAGAGAAACTTGAT AACTTGGAATTTGATCTGGTTGCTGAATCATCAGAAGTTGTTGGAGAAACCTTAAAATAT AAGCCTTCATTGAATGATGTTAGTTCCTATCTGATTCTTTATTGGGTTCCTACACGGCGT GATGGAAAGGTTGGTGATCCTTTGATGGCTATCTCTGATGATCCGGTCATGGCAGCTTTT CCATCTGTTTCGGATGTTCACTTAGAGCAGAAAAGTTCAGATGTATATTGTGGACTAGGC ATCTATTATGGTGGATATGAGGGATTAAGCTTGTATAGATGGTACAGGGAATCTAGTGAT GGAACTAGGCTTCACATAGATGGTGCTGATTCAGTCACATACGAAGTGACAGATGCTGAT TACAGCTGCCGTCTACTGTTTGGTTATACTCCTGTTCGTTCAGATGGGATAAGTGGAGAA GAAAAACTCTCTGAACCATCTGATGTAATTTTGCCAGCAATTTTGTGTAACCACATGTCT TTTCTTTCAGAACTACTCAAAATCGAGACACTCAATTTCAAGGGGAATCAGGTTGAAAGA GAAACACTGACTGCTGCTGAACAAATTCCGTACAGTGAGATTCAACAACATATATGGAAA AATTATAAGAAAGAGATGAAATATCAATGGTTTATTTCCAATGAATCAGGAGGCGATCAG TCTTTTGAACCATTGGCAACCCAGTGTTCTCGCTCATACAAAGTGCGCTTTGAGGATATT GGTCGTTGCCTGAAATGCGAATGCTTTGTCACTGATGTATTTGGACGATCTAGTGAATTG GTATCCGCTGTGACTGCTCCTATTTTGCCAGGAAGGCCTAAAATTGAAAAGCTGGAGATT GAAGGAAGAGGTTTCCACACTGACCTATATGCCGTTCAGGGTACCTATAGCGGAGGCAAA GAAGGCAAGAGTAAAATACAATGGCTCAGATCGATGGTTGGAAGCCCTGATCTTATCTCC ATACCTGGCGAAACTGGAAGAACGTATGAAGCTAATGTTGATGATGTAGGGTATAGGCTT GTTGCAATTTATACACCTGTAAGAGAGGATGGAGTTGAGGGACAACCTGTTTCTGTTTCA ACAGAACAGATTGCAGTTGAGCCTGAACTTTACAGGGAAGTGAAACAGAAGCTCGATGAT GGTTCAGTCAAATTTGAGGTTCTGTGTGACAAGGACCGAACACCCAAAAAGGCACAAGTA ATGGGCCATTTGGAGCGGAGGGTTTTGGAAGTCAACCGAAAGAGGATAAAAGTAGTAAAG CCTGGATCTAAGACATCATTCCCGAGTACTGAAGTACGAGGAACCTACGCTCCACCGTTC CATGTCGAGCTGTATCGCAATGACCAGCACCGCTTCAAGATTGTTGTCGACGGTGATACT GAAGTTGACTTAATGGTGCAAACACGGCACATGCGAGACCGCATCATCCTCACGATCAGA GGCCTCGCCCAGAAGTTCAACAGCACCTCCCTCAACACACTTCTCAGGATCGAGTCATGA TAGACCTGACAGTGTAAAAACCAACTATTACGGGAAGCTGTACCCCTTGTTCCGATTGGT TAGAGTGCGTGGTTTTAGTAGGATTCGTGACATGCCAGCCTTTTGTGTGTATGGGTGTGG GACGGGCCGAGCGTGTTGGATTACAATTTTTTCCCTGACACATCTCTCAAATCAGAGCAG CATCAGCTGGTTGCTCTGACTGGTGCCGTCGTGCGTCATGAAATGTACATAGGGTGGTTA GAGCGAGAAAGAGAGTGGTGTTTCTTGGTGCTGTATTTATTATGCACTGGTTGGGTTGGG TTTTTTCGACTGCCATTCTCATACTAAGTATTGGTTCTTTCTTTT