Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018787_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:7:5212843:5216700:-1 gene:Zm00001d018787 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-box ATP-dependent RNA helicase 53
Sequence	ATGATCTCCCTGCTCCGACGCGCCCTCGCCGCCTCCGCCTCGTCTCCGGCGGCCACGTAC CGGAGACTCCTCGTCGTCGCGCCACTCTCTCCGCGCGCGGCCCCTCCAGGCCCATGCCAG GCGCCCGCGGCAGGGTCGCAGGAGCCGCCGAGGCGGGCGTTCCACTGTTCTACGGCCCCC CTGGGGTTTAGGTCCACTCCGGCGTCGTGGGCCGGTCCCTGTCCGGGGGAGGGCGAGGGC GAGGGCGTGGATACGGGGGCTGAGAAGGGGCTGGAGATCGCGAGGCTGGGGACCTCGCCT CGGATCGTGGAGAAGCTCGCCGCGCGGGGCATCACCAGGCTCTTCCCCATCCAGAGGGCT GTTCTTGAGCCAGCAATGCAAGGAAAAGACATGATTGGCCGTGCTCGAACAGGGACTGGG AAGACCCTGGCTTTTGGTATTCCTATCATGGACAAGATCCTAAGCTACAACGAGAAGACT GGAAATGGCAGGAATCCTTTAGCCATAATCTTGGCACCAACAAGAGAACTTGCTCGGCAG GTTGAGAAGGAGTTTAGAGAATCTGCTCCCTTGGACACCCTCTGTGTATATGGAGGTGTT CCTATCAATCAGCAAATGAGAGCTCTTAACTATGGTGTTGACATAGTGGTCGGAACACCA GGTCGAGTTATTGACCTTCTGAGAAGGGGTGTTTTAAACCTTTCACAGATCCAGTTTGTG GTCCTAGATGAAGCTGATCAAATGCTGGCTGTGGGTTTCGATGAAGATGTTGAGGTGATC ATGGAGCAATTGCCACAGAATCGTCAAAGCATGCTGTTCTCTGCAACAATGCCTAGTTGG ATAAGAAAAATTTCGAACAAGTACTTAAAGGATCCAGTTATAATTGACCTTGTTGGTGAC TCAGATCAGAAATTACCTGAAGGAATCTCTCTCTATTCCATTGCCTCTGATAACTTCGGG AAGCCTTCAATTATTGGTCCCTTGATTAAAGAGCATGCCAATGGTGGAAAATGCATTGTG TTTACTCAAACTAAACGGGAAGCAGATAGATTGGCATATGTCATGGGAAGGAGTTATCAG TGCCAGGCACTGCATGGGGATATTTCACAGAATCAAAGAGAGAGGACACTTTCAGGATTT CGTGATGGTCGTTTTAATATCCTTGTGGCAACTGATGTCGCAGCTCGTGGATTGGACATA CCCAACGTTGATCTAGTGGTACATTATGAGATCCCAAATACATCGGAGTTATTTGTTCAC AGATCTGGGAGAACTGCACGAGCAGGGAAGAAAGGCAGTGCAATTCTAATATACACGTAT GAACAGACTAGAGCTGTAAGGGTCATCGAGCAAGATATAGGATGCAGGTTCACAGAGCTT CCGAAGATGCCAGTTTCAGACGAGGCTGCAGACATGTTTAATGTCATGAGAGATACTCGC TCTAGATCAGTTGGAAGCAGAAGAACAGGTGGACCTTTTAGCCGTGAAGGTTATGGTGAC TTTGAAGACCATCGTTCCAGAGGCTTCGGTGATTTTGAGAGATTTGGTGGTTCCTCTGAC CGCGGCGGTGGATTCCGTGACTCAGGTTCAAGGTACCACGGTGGATCTGGAGGTTTCAGA CGATCTTCCAGTGACTTTGGCAGGCCTAGCTTCAGTCGTTCTGATAGATTTGGCGACTTT GGAGACAGTGATTTCAGCAGACGTGGTAACGCTGACTTTGGGCGTTCCCGGAGCTCTGAT GATTCAGGCTCCTCACGTTATCCAAGAGGCTATGGTGGTTCTGGCACGTCAGATTCCGGC AACTTCGGTGGCTTCAAGGGTTCCAAGTGA

Peptide Sequence

PEP ID	Zm00001d018787_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:7:5212843:5216700:-1 gene:Zm00001d018787 transcript:Zm00001d018787_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-box ATP-dependent RNA helicase 53
Sequence	MISLLRRALAASASSPAATYRRLLVVAPLSPRAAPPGPCQAPAAGSQEPPRRAFHCSTAP LGFRSTPASWAGPCPGEGEGEGVDTGAEKGLEIARLGTSPRIVEKLAARGITRLFPIQRA VLEPAMQGKDMIGRARTGTGKTLAFGIPIMDKILSYNEKTGNGRNPLAIILAPTRELARQ VEKEFRESAPLDTLCVYGGVPINQQMRALNYGVDIVVGTPGRVIDLLRRGVLNLSQIQFV VLDEADQMLAVGFDEDVEVIMEQLPQNRQSMLFSATMPSWIRKISNKYLKDPVIIDLVGD SDQKLPEGISLYSIASDNFGKPSIIGPLIKEHANGGKCIVFTQTKREADRLAYVMGRSYQ CQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIPNVDLVVHYEIPNTSELFVH RSGRTARAGKKGSAILIYTYEQTRAVRVIEQDIGCRFTELPKMPVSDEAADMFNVMRDTR SRSVGSRRTGGPFSREGYGDFEDHRSRGFGDFERFGGSSDRGGGFRDSGSRYHGGSGGFR RSSSDFGRPSFSRSDRFGDFGDSDFSRRGNADFGRSRSSDDSGSSRYPRGYGGSGTSDSG NFGGFKGSK

Transcript Sequence

Transcript ID	Zm00001d018787_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:5212843:5216700:-1 gene:Zm00001d018787 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-box ATP-dependent RNA helicase 53
Sequence	GCCGGGGGGCCCGACGTCGAGGGCTCGAGGCCTTAGTTCCACCACTTGCTGCCACCGACG CGCCATCGCCGCGATGATCTCCCTGCTCCGACGCGCCCTCGCCGCCTCCGCCTCGTCTCC GGCGGCCACGTACCGGAGACTCCTCGTCGTCGCGCCACTCTCTCCGCGCGCGGCCCCTCC AGGCCCATGCCAGGCGCCCGCGGCAGGGTCGCAGGAGCCGCCGAGGCGGGCGTTCCACTG TTCTACGGCCCCCCTGGGGTTTAGGTCCACTCCGGCGTCGTGGGCCGGTCCCTGTCCGGG GGAGGGCGAGGGCGAGGGCGTGGATACGGGGGCTGAGAAGGGGCTGGAGATCGCGAGGCT GGGGACCTCGCCTCGGATCGTGGAGAAGCTCGCCGCGCGGGGCATCACCAGGCTCTTCCC CATCCAGAGGGCTGTTCTTGAGCCAGCAATGCAAGGAAAAGACATGATTGGCCGTGCTCG AACAGGGACTGGGAAGACCCTGGCTTTTGGTATTCCTATCATGGACAAGATCCTAAGCTA CAACGAGAAGACTGGAAATGGCAGGAATCCTTTAGCCATAATCTTGGCACCAACAAGAGA ACTTGCTCGGCAGGTTGAGAAGGAGTTTAGAGAATCTGCTCCCTTGGACACCCTCTGTGT ATATGGAGGTGTTCCTATCAATCAGCAAATGAGAGCTCTTAACTATGGTGTTGACATAGT GGTCGGAACACCAGGTCGAGTTATTGACCTTCTGAGAAGGGGTGTTTTAAACCTTTCACA GATCCAGTTTGTGGTCCTAGATGAAGCTGATCAAATGCTGGCTGTGGGTTTCGATGAAGA TGTTGAGGTGATCATGGAGCAATTGCCACAGAATCGTCAAAGCATGCTGTTCTCTGCAAC AATGCCTAGTTGGATAAGAAAAATTTCGAACAAGTACTTAAAGGATCCAGTTATAATTGA CCTTGTTGGTGACTCAGATCAGAAATTACCTGAAGGAATCTCTCTCTATTCCATTGCCTC TGATAACTTCGGGAAGCCTTCAATTATTGGTCCCTTGATTAAAGAGCATGCCAATGGTGG AAAATGCATTGTGTTTACTCAAACTAAACGGGAAGCAGATAGATTGGCATATGTCATGGG AAGGAGTTATCAGTGCCAGGCACTGCATGGGGATATTTCACAGAATCAAAGAGAGAGGAC ACTTTCAGGATTTCGTGATGGTCGTTTTAATATCCTTGTGGCAACTGATGTCGCAGCTCG TGGATTGGACATACCCAACGTTGATCTAGTGGTACATTATGAGATCCCAAATACATCGGA GTTATTTGTTCACAGATCTGGGAGAACTGCACGAGCAGGGAAGAAAGGCAGTGCAATTCT AATATACACGTATGAACAGACTAGAGCTGTAAGGGTCATCGAGCAAGATATAGGATGCAG GTTCACAGAGCTTCCGAAGATGCCAGTTTCAGACGAGGCTGCAGACATGTTTAATGTCAT GAGAGATACTCGCTCTAGATCAGTTGGAAGCAGAAGAACAGGTGGACCTTTTAGCCGTGA AGGTTATGGTGACTTTGAAGACCATCGTTCCAGAGGCTTCGGTGATTTTGAGAGATTTGG TGGTTCCTCTGACCGCGGCGGTGGATTCCGTGACTCAGGTTCAAGGTACCACGGTGGATC TGGAGGTTTCAGACGATCTTCCAGTGACTTTGGCAGGCCTAGCTTCAGTCGTTCTGATAG ATTTGGCGACTTTGGAGACAGTGATTTCAGCAGACGTGGTAACGCTGACTTTGGGCGTTC CCGGAGCTCTGATGATTCAGGCTCCTCACGTTATCCAAGAGGCTATGGTGGTTCTGGCAC GTCAGATTCCGGCAACTTCGGTGGCTTCAAGGGTTCCAAGTGATGAATCGGATAGGGTTT TCTTGTACAGTTCTGAACCTTTTCTAACACCTGTTGTATGTTCCTTCCCTGACCAAACCA GTAGCACTTGATTCACCCGTTGTTTCACGAGTAGTTTGGTGTTGTAGGCCTGTAGGGTTC TTTCAGAACTTCTGCACTTCTGATACAAGGTTGTTTCAGAACCTGCATCACTGTATGCTC TGATTCTGTTCTCTTTAAGGGTTGATTTGGTGACAAGGAGATCCTGAGAGGATTGGAGGG GATTGAGGGGGAAATAAACTAATTTCCTCCTCAATTCCCTCCGATCCTCCCAGAATCCCG GGTCACCAAATCAGCCCTAATAATCCTACGAAAGGATGGCTTTTGGTTTCTGTTCATGTA CATGGAAATATTTGCAATTTCGCC