Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018779_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:7:5051813:5053391:-1 gene:Zm00001d018779 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:photosystem II oxygen evolving polypeptide2 description:Oxygen-evolving enhancer protein 2-1 chloroplastic
Sequence

ATGCGACCCCACGGCCGCCTCCCCTCGTTAACACGTCGCGGCCTCGCTAACGCGCCCGCG
CTAGCGCGAGTGGTGGCACCCACGCACACTCTTCTCCCCCACGAGTCCGGACCCCGGAGG
AGCCAAGCCATGGCGTCCACCTCCTGCTGCCTCCTCCACCAGTCAACCGCCCGCCTCGGC
GCGTCGCCGCGCCTGGCCGCCGCCCCGCCGCGCAGCGCCCAGCTGCTCGTCTGCAAGGCC
CGGAAGCAGGAAGCCGCCGCGGACCAGAGCGACGTCTCGCGCCGCGCCGCGCTCGCGCTC
CTCGCCGGCGTCACGGCCGCCGCCGGCGCCAAGGTGGGTCCTGCCGCCGCGGCATACGGA
GAAGCAGCCAACGTGTTCGGCAAGCCCAAGGCGAGCACGGAGTACATCGCGTACAGCGGC
GACGGCTTCAAGCTGCTGATCCCGTCCAAGTGGAACCCCAGCAAGGAGCGGGAGTTCCCC
GGGCAGGTGCTCCGCTACGAGGACAACTTCGACGCCAACAGCAATGTGTCCGTCATCATC
CAGCCCACGTCCAAGAAGACCATCGCCGACTACGGCTCTCCCGAGGAGTTCCTCTCCCAG
GTCGACTACCTGCTCGGCAGGCAGGCCTACGGCGGCAAGACCGACTCCGAGGGCGGGTTC
GAGACCGGCGCCGTGGCCACCGCCAACGTCCTGGAGAGCTCCACCCCCGTGATCGACGGC
AAGCAGTACTACGCCGTGTCCGTGCTCACCAGGACGGCGGACGGCGACGAGGGCGGCAAG
CACCAGCTCATCGCGGCCACCGTCTCCGACGGCAAGCTCTACATCTGCAAGGCGCAGGCC
GGCGACAAGAGGTGGTTCAAGGGCGCCAGGAAGGGAGTCGAGAAGGCCGCCTCCTCCTTC
AGCGTCGCATGA

Peptide Sequence

PEP ID

Zm00001d018779_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:7:5051813:5053391:-1 gene:Zm00001d018779 transcript:Zm00001d018779_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:photosystem II oxygen evolving polypeptide2 description:Oxygen-evolving enhancer protein 2-1 chloroplastic
Sequence

MRPHGRLPSLTRRGLANAPALARVVAPTHTLLPHESGPRRSQAMASTSCCLLHQSTARLG
ASPRLAAAPPRSAQLLVCKARKQEAAADQSDVSRRAALALLAGVTAAAGAKVGPAAAAYG
EAANVFGKPKASTEYIAYSGDGFKLLIPSKWNPSKEREFPGQVLRYEDNFDANSNVSVII
QPTSKKTIADYGSPEEFLSQVDYLLGRQAYGGKTDSEGGFETGAVATANVLESSTPVIDG
KQYYAVSVLTRTADGDEGGKHQLIAATVSDGKLYICKAQAGDKRWFKGARKGVEKAASSF
SVA

Transcript Sequence

Transcript ID

Zm00001d018779_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:5051813:5053391:-1 gene:Zm00001d018779 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:photosystem II oxygen evolving polypeptide2 description:Oxygen-evolving enhancer protein 2-1 chloroplastic
Sequence

CCACGCACCACAGGCACAGGTACGGTATGCGACCCCACGGCCGCCTCCCCTCGTTAACAC
GTCGCGGCCTCGCTAACGCGCCCGCGCTAGCGCGAGTGGTGGCACCCACGCACACTCTTC
TCCCCCACGAGTCCGGACCCCGGAGGAGCCAAGCCATGGCGTCCACCTCCTGCTGCCTCC
TCCACCAGTCAACCGCCCGCCTCGGCGCGTCGCCGCGCCTGGCCGCCGCCCCGCCGCGCA
GCGCCCAGCTGCTCGTCTGCAAGGCCCGGAAGCAGGAAGCCGCCGCGGACCAGAGCGACG
TCTCGCGCCGCGCCGCGCTCGCGCTCCTCGCCGGCGTCACGGCCGCCGCCGGCGCCAAGG
TGGGTCCTGCCGCCGCGGCATACGGAGAAGCAGCCAACGTGTTCGGCAAGCCCAAGGCGA
GCACGGAGTACATCGCGTACAGCGGCGACGGCTTCAAGCTGCTGATCCCGTCCAAGTGGA
ACCCCAGCAAGGAGCGGGAGTTCCCCGGGCAGGTGCTCCGCTACGAGGACAACTTCGACG
CCAACAGCAATGTGTCCGTCATCATCCAGCCCACGTCCAAGAAGACCATCGCCGACTACG
GCTCTCCCGAGGAGTTCCTCTCCCAGGTCGACTACCTGCTCGGCAGGCAGGCCTACGGCG
GCAAGACCGACTCCGAGGGCGGGTTCGAGACCGGCGCCGTGGCCACCGCCAACGTCCTGG
AGAGCTCCACCCCCGTGATCGACGGCAAGCAGTACTACGCCGTGTCCGTGCTCACCAGGA
CGGCGGACGGCGACGAGGGCGGCAAGCACCAGCTCATCGCGGCCACCGTCTCCGACGGCA
AGCTCTACATCTGCAAGGCGCAGGCCGGCGACAAGAGGTGGTTCAAGGGCGCCAGGAAGG
GAGTCGAGAAGGCCGCCTCCTCCTTCAGCGTCGCATGATGATGTAATTTTATTTCTTCGA
TGGGATGGGATGCACGCACTACGTAGAGAGCTTGGCTAGGCCAGGCCTGGCTGAGCACGC
TTGTGTGTTCCTTCGACTGTACATGAGAACAAAGACTAAGGAGAGCTCCATTCCCGTACA
AGGATCGATTTCTTCAGTCACGCAAATTGTTTAGGAAATCTTAGTGCTAATAGTAGCGCT
TCGATGTTCCCAGCCATGAGAACAAAGACTATAAGCATCTTCCGGGACTTGAATCAGAGT
TCCTGAGCTTGTGGCCTGGCCTGAGCCACAGGCACACAAAGTCATATACATACCCACTAA
AGAAAAAAAAGTCTCATACTCATACCACTACCTATCATGGGTACAAAATTATACCATTCC
TGTAACCAACCACTAACATTACAGTAG