Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018693_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:7:2686485:2689002:-1 gene:Zm00001d018693 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat 2 description: pentatricopeptide repeat 2
Sequence	ATGGGCCCTCCGGCCTACACCGCCTCCCCCTGCACGGGGTCTGCCCTCTTCTCCAACACC CGAGCGCCGCCGCCGCCACCGCGGCTTCTTATCCGATGGGGCCCGGGGCCGCCGTCGGCC GTGGGGAGGCACGGAGGCCGCGTAACTCCGTCGCAGGAGAGGCGCGGCCCCGCCCCGTCG CAGGAGAGGCGCCGACCCGCTCCGTCTCAGGAGAGGCGCCGCCCCACGGAGTCTTCGTCC CAGTCTCACCAGCTCCAGGAACGGAAGCGGCACTGGAAGGCGGGGGAGTTCCCGGGGACC GCTGCCGATGGAGGAGGTGGCGGCGGAAGGCGCCCCGCACTAGGGAACCGGCATTCGAAG GCCGGGGAGTTTCCCGGGACGGACGGCGTCCGCCCCGCCCCCGCGCCGCCGCAGGGGAAG CGGCACTGGAAGGCCGGCGAGTTCCCGGGCGCCGCCGCCGCCCCCGGTTCGGGGACGCCG AGGACTCCCCTCAAGAACGTCAAGAAGCGGCTGGACGCCCGCGCGGACGCCAAGGCGTGG GCGTGCACCGTCACCGAGGCCCTCGCGGACCGCGTCAGCTCCAAGAACTGGCAAGAGGCG CTCCAGGTCTTTGAGATGCTCAAGGAGCAGCCGTTCTACCATCCCAAAGAGGGCACCTAC ATGAAGCTCATCGTGCTGCTGGGCCGGTCAGGGCAGCCGACCCGTGCACACCAACTCTTC GACGAGATGTTGCAGCAAGGATGCCAGCCCACCCCCGAGCTCTACACCGCCTTGATCGGG GCCTACTGCCGAAGCGGCCTACTGGACGAGGCACTCCAGCTCCTCAACGACATGAAGAGC TCCCCTTTATGCCAGCCTGACGTCTACACCTACAGCACCATCATCAAGGCCTGCATTGAC GCTGCCAGGTTCGACCTCACCGACGCCATGTACAAAGACATGGCGGAGCGCTCCATATCA CCCAACACGGTCACACAGAACATCGTCCTCAGCGGCTACGGGAAGGCCGGGCGGTTGGAC GACATGGAGCGAGTGCTCTCCGACATGCTCGACAGCGTGTCATGCAAACCGGACGTTTGG ACCATGAACATCATCCTCAGCCTCTTCGGGAACCGGGGCGAGGTTGAACTGATGGAGAGA TGGTACGAGAAGTTCCGAGGCTACGGGGTCGAGCCGGAGACCCGCACGCTGAACATCCTG ATTGGCGCCTACGGGAAGCGGCGGATGTATGACAAGATGTCCGCAGTCATGGAGCACATG CGCAAGCTCGCGTTCCCGTGGACGACCGCGACGTACAACAACGTGATCGAAGCATTTGCT GAGGCCGGCGACGCCGGGAACATGGAGCACGCGTTCAACCAGATGCGTTCCGAGGGCATG AGGCCGGACACTAAGACCTTCTGCTGCCTGATCGACGGGTTCAGCAGGGCAGGCCAGTTC CATAAGGTGGTGGGCATGGTGAAGCTCGCCGAGAGGCTCGACGTGCCCGTGAACACGCCT TTCCACAATGCTGTTCTTGGCGCGTGCGCTAGAGCGGACGATCTCGTGGAGATGGAGAGG GTGTTCAGGCGCATGAAGCATACGCAGTGCGAGCCTGATGCTTCGACGTACTCTATCTTG GTGGAGGCTTATCGCAAGGAGGGAATGACCGACAAGATCTATGCTCTGCATCAGGAGAAC CCGGCTCTGGTTCCAGCTGATTTTGTCATGGTTTGA

Peptide Sequence

PEP ID	Zm00001d018693_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:7:2686485:2689002:-1 gene:Zm00001d018693 transcript:Zm00001d018693_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat 2 description: pentatricopeptide repeat 2
Sequence	MGPPAYTASPCTGSALFSNTRAPPPPPRLLIRWGPGPPSAVGRHGGRVTPSQERRGPAPS QERRRPAPSQERRRPTESSSQSHQLQERKRHWKAGEFPGTAADGGGGGGRRPALGNRHSK AGEFPGTDGVRPAPAPPQGKRHWKAGEFPGAAAAPGSGTPRTPLKNVKKRLDARADAKAW ACTVTEALADRVSSKNWQEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLF DEMLQQGCQPTPELYTALIGAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACID AARFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVW TMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHM RKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQF HKVVGMVKLAERLDVPVNTPFHNAVLGACARADDLVEMERVFRRMKHTQCEPDASTYSIL VEAYRKEGMTDKIYALHQENPALVPADFVMV

Transcript Sequence

Transcript ID	Zm00001d018693_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:2686485:2689002:-1 gene:Zm00001d018693 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat 2 description: pentatricopeptide repeat 2
Sequence	CGCCGGTCTAGAGCCGGCAGCGCTGCGGCGGAGCACCAACCGAGCTCCGATCCCACCCCG CTCCCAACCGCGCGGCCCTGTCCATGGCGCGCGCGGTGCGGCGGCGAGCCCCCATGCATT CCCGCCGCCGGAGCGCGGCCTGCTAAGCGACGACAATTCCTCTCCCTCTCCTAAATCCAC TCCCCCACGTGTCTTCATGGGCCCTCCGGCCTACACCGCCTCCCCCTGCACGGGGTCTGC CCTCTTCTCCAACACCCGAGCGCCGCCGCCGCCACCGCGGCTTCTTATCCGATGGGGCCC GGGGCCGCCGTCGGCCGTGGGGAGGCACGGAGGCCGCGTAACTCCGTCGCAGGAGAGGCG CGGCCCCGCCCCGTCGCAGGAGAGGCGCCGACCCGCTCCGTCTCAGGAGAGGCGCCGCCC CACGGAGTCTTCGTCCCAGTCTCACCAGCTCCAGGAACGGAAGCGGCACTGGAAGGCGGG GGAGTTCCCGGGGACCGCTGCCGATGGAGGAGGTGGCGGCGGAAGGCGCCCCGCACTAGG GAACCGGCATTCGAAGGCCGGGGAGTTTCCCGGGACGGACGGCGTCCGCCCCGCCCCCGC GCCGCCGCAGGGGAAGCGGCACTGGAAGGCCGGCGAGTTCCCGGGCGCCGCCGCCGCCCC CGGTTCGGGGACGCCGAGGACTCCCCTCAAGAACGTCAAGAAGCGGCTGGACGCCCGCGC GGACGCCAAGGCGTGGGCGTGCACCGTCACCGAGGCCCTCGCGGACCGCGTCAGCTCCAA GAACTGGCAAGAGGCGCTCCAGGTCTTTGAGATGCTCAAGGAGCAGCCGTTCTACCATCC CAAAGAGGGCACCTACATGAAGCTCATCGTGCTGCTGGGCCGGTCAGGGCAGCCGACCCG TGCACACCAACTCTTCGACGAGATGTTGCAGCAAGGATGCCAGCCCACCCCCGAGCTCTA CACCGCCTTGATCGGGGCCTACTGCCGAAGCGGCCTACTGGACGAGGCACTCCAGCTCCT CAACGACATGAAGAGCTCCCCTTTATGCCAGCCTGACGTCTACACCTACAGCACCATCAT CAAGGCCTGCATTGACGCTGCCAGGTTCGACCTCACCGACGCCATGTACAAAGACATGGC GGAGCGCTCCATATCACCCAACACGGTCACACAGAACATCGTCCTCAGCGGCTACGGGAA GGCCGGGCGGTTGGACGACATGGAGCGAGTGCTCTCCGACATGCTCGACAGCGTGTCATG CAAACCGGACGTTTGGACCATGAACATCATCCTCAGCCTCTTCGGGAACCGGGGCGAGGT TGAACTGATGGAGAGATGGTACGAGAAGTTCCGAGGCTACGGGGTCGAGCCGGAGACCCG CACGCTGAACATCCTGATTGGCGCCTACGGGAAGCGGCGGATGTATGACAAGATGTCCGC AGTCATGGAGCACATGCGCAAGCTCGCGTTCCCGTGGACGACCGCGACGTACAACAACGT GATCGAAGCATTTGCTGAGGCCGGCGACGCCGGGAACATGGAGCACGCGTTCAACCAGAT GCGTTCCGAGGGCATGAGGCCGGACACTAAGACCTTCTGCTGCCTGATCGACGGGTTCAG CAGGGCAGGCCAGTTCCATAAGGTGGTGGGCATGGTGAAGCTCGCCGAGAGGCTCGACGT GCCCGTGAACACGCCTTTCCACAATGCTGTTCTTGGCGCGTGCGCTAGAGCGGACGATCT CGTGGAGATGGAGAGGGTGTTCAGGCGCATGAAGCATACGCAGTGCGAGCCTGATGCTTC GACGTACTCTATCTTGGTGGAGGCTTATCGCAAGGAGGGAATGACCGACAAGATCTATGC TCTGCATCAGGAGAACCCGGCTCTGGTTCCAGCTGATTTTGTCATGGTTTGAATGACCCA GTGACTGAGTCACGGTCCTGAAATTTTAGAGCTTGGTTGCATTGGTTGAGAATCTTCTTG CTATCCACCAAACAGAGTGGCGGCCATTCTTCAACTCCATTTTTTTTGTCTGTTGGTATG CAGAGCTAGTATAGACGTCTCCTCCAACTCAAGGGGGGTGAAAGTGCGTCAGCAACGTAC GGGTATTCATCTAGTTTGATATATTCCAAGAAAAACAAAGACCAATGCAGGAGAAGATGG ACAATGTGACACAGAATAATCTCTGGAAAATAGATACCTGGAAGCTTCCTCGTCAAACAA GACTATTATGAAGACTACAAAAGCCGCCCGCCCGTTCGACAGCGAGCTATATATGAGCTG TCTGGAACACGATTTCCCCCCTCTGTTCCTGCGTTTTTCATGCACGAATAAATCTGAGCT GATTTCTGTG