Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018667_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:7:2198235:2203098:1 gene:Zm00001d018667 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS3 description: MADS3
Sequence

ATGGGAGAGGATCTGGAGTCTTTGAATCCAAAAGAGCTCCAACAACTAGAGCAGCAGCTG
GAGAGCTCACTGAAGCACATCAGATCAAGAAAGAGCCACCTTATGGCCGAGTCAATTTCT
GAGCTTCAGAAGAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCTCTACAGAAGGAACTT
TCAGAGAGGCAGAAGGCGGTCGCTAGCCGGCAGCAGCAGCAGCAGCAGGTGCAGTGGGAC
CAGCAGACACAGGTCCAGGTCCAGACAAGCTCATCGTCTTCTTCCTTCATGATGAGGCAG
GATCAACAGGGACTGCCACCTCCACAAAACATCTGCTTCCCGCCGTTGAGCATCGGAGAG
AGAGGCGAAGAGGTGGCTGCGGCGGCGCAGCAGCAGCTGCCTCCTCCTCCGGGGCAGGCG
CAACCACAGCTCCGCATCGCAGGTCTGCCGCCATGGATGCTGAGCCACCTCAACGCATAA

Peptide Sequence

PEP ID

Zm00001d018667_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:7:2198235:2203098:1 gene:Zm00001d018667 transcript:Zm00001d018667_T012 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS3 description: MADS3
Sequence

MGEDLESLNPKELQQLEQQLESSLKHIRSRKSHLMAESISELQKKERSLQEENKALQKEL
SERQKAVASRQQQQQQVQWDQQTQVQVQTSSSSSSFMMRQDQQGLPPPQNICFPPLSIGE
RGEEVAAAAQQQLPPPPGQAQPQLRIAGLPPWMLSHLNA

Transcript Sequence

Transcript ID

Zm00001d018667_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:7:2198235:2203098:1 gene:Zm00001d018667 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS3 description: MADS3
Sequence

TTTCTTTTTCATTTTTCACCTTTCAAAGGAAATGATGTATTTTTTGAGTTATGACCTAAT
TTTGTGTGCAAATATATATTATATTATAAATTAAAATAAACATCTTGCTTTAACTTTACA
TATTTTTCTATCTTTATATATGAGTAAGGCGTCGCCTTGCCTTATGCCTTTTCGCTTAAA
AGGTGAAAAGGTGGCTGCTCGCCTTATCGCTTTAATAACTATGGTTAAGGCCACTCATTC
CCTCTCTCCCAGCCCTCTCCCTCCCTCCGAGCCGCACCGGTACTTCCTACTCTTTCTAGC
CGCACTAGTCGCCTCTCTGTCTCTCATCTCCTAGCCCTCTTTCACTCCTAGCCGCTTCTC
CCAGTCGTTGCCTCCGTGTCGCCCTCAGCTCCTCTGTGACGCCCTCCGCCGAATCTCCCT
TCACGGACGCCTCTACGCCACCCTCTGCCGCGTTGCAGCTCTCAGCCGCCTTAGGTTCTA
GAGCAAAGCAAGGATGCCTTACCTCCTCGATTCGCCTTACCGCCTAAGCGTCACCTAGGC
AATGCCTTGAAATCCTTGATTGTATGATTAGACATTGTCATCTTATTTTGAACTATTGTA
GTATTTAAAAACATGCAAATAATTCATAGACTGTTTGACATGTATATGATATCGGTATGT
ATCCACTCAAATAATATTTGATATCCATTTTCTATCAACCTACATTATGTCTTATCTCGT
CCTATAGCCAACCCACACTTTTACAGCTTTACTACTCGAATCCGATCCCGAATTCAAGTG
AAAAAATTAGGTTAGGATATGAGACGACATGCTATTTGTCCATATCTATCATGTTTTCAC
TCTTACGATGCGTCATATCTTTGAACGTCAGGGCCTGCCCATTTGCATTTTCAAGTGTTG
GGTGCTTGGGGCCCCTTCGTTTAGTATGATGTACTTGGTAGCTGATGTAGTCTTTTGTAC
TTGATAATACTTTATAATAAACCGCGTGTGCATGGATGATTACATGATCGATGCACGTAT
CACATAGTGATCTCGGGTACCCTAGAGCTAAGTCGTGGCAACAACACACTTGTTAAGCTT
GTAATATCATACATCACATATTTAATATATGTTGTATCTAAGACTTATCAGTTGAGCTAA
CATTATTGAGTTGTTCTTAGGCCTTCAGATGTTGGGTCCTTCTCCTGTGGTTGTACTATC
CTAGTTATGCCCAATCACACCCTTTTGTCTTGTGTGGGATTACACTTAGTCGCATCGTGT
CTCTTGTTCTCATGGGGCTTGGTACCCTGAAGGTTTTAGGGCCAGGCGGCTCTCACAATC
CGAGGTCAGGGACCTTAAGAATCTTAGGGCCAAGAGAGCCCCCCTAGCGTTGAAATGTTG
TTTAGCGCTCTAGTGACCAAAATGCCTTGGGCATCTATAGGGCTAGACAAAATCTTAGGG
CATCTATACCGCGTGTTGTTTAGGGCTTGCTCGGTTCATGGTCGGCTCGACTCGTTTAAA
TTTTATCACGAGTTGAGTTGACATCCCAGCTCAGTTTTTTTAACGAGCTAGCTCGTAAGC
TCAAGGAGCTATCACATTTCAGCAAAAAGGAAACTATATGCATATTATTTATGCATCAAT
TAAACATGTTATATGTATGTGTGATGTTTATGGCCTTTGATTTAAAATGATGATTAATGA
ACTGTGTCTATTTGTTAAATTGGTCCATACGACTGTGACTGTGGTTAAATATTGAGGAAT
ATGTGTGTAAATTGTGCATTGATGAGTGATAAGATGTGTTAATTTGGTGTTGCATTGATG
TGGTGTGTGACACTATGGTTTGGAATTAAATAGAAATTAATTATTATATATATAAATTAT
TTTTTCTGATGTGACTCGCGAGCTTAATGAGTCGAATCGAGCCAGCTCGTTAGACATCTA
TATTTTTTCACAGTGCCCTAGGGCTTGAGGAGCCACGTTGGCGGCTTTTGAGCACCCTAG
GTCTCGAGGAACTCAAGGGCTTTAATCTTTTATTAGCGTCATAGGGAATAAGGAGCCTCA
GAAGCTTTAGATTATTCTATCCTAGGACATCCAGGCACTATGAGTTTCAGTCCATAGAGT
GGGCCCTAGCCCCTGGGTCTCTTTATGGTTCTTTACAAGATTTAGTGCGTAGCTATCTTT
TCGGGGCATTTTCATTTCAAGTTATGCAGCGTCAAGCCTCTCTATGGAGCTCGGAAAGGT
CCCTGAGCCCCGAGGCATGGAGCCCTATGATAGCTGATTGTTCTGGGATCCTTGAATGCG
TCTTGGCAACTGTCGGAAGTCGTATAACCTTCACCGGATGTTGACAATCATGTTAATATG
GTCATCAAATTAAAGACACATTCATTAAAGTTTTTCTATTTCCTTTTTCCATTCTCAATG
TTGATTCATAGGTCTTGTTGCATACTTGCATATATATGTGGAAATAACAACTTTTGTCCA
AAGCAAATTTACATAGGAGCAGAGGAGTCTAATGTTATGCCCTACATTTCATTCCAGATT
GATCTTTGCTTAACTTAGAAGAAATTAGTGTATTCTGATCATCATCAGGCTGTCTCTCTG
CCTAAGACTGAGTGACTGACACAACGATACAATATAAATTTTATTTCTAGCTTTAATCTC
TCTAGATGCTTGTGTTATATACTATCAGAAATAAGGGTCGTCGTTTCCCTTCGCGTATAC
AATGTCAACATGTTGCTCTTTCATAAACTAGCCATCATGTGATTTTCTTTACTTTAGTCC
GCATCAACAAATCCTGGAATTATCGGCAATACTTTTATGACATTTTTGTCTGTTAAAATA
GGATGATTATGTTTATAGATGATAATTATTCTGTTGATGACCCGTATTTGCACTGAGATG
TTCATCATGTTCTTATTTCTCATTTTGTCTCAAGTGCTTATGCGTTGGAAACATTCTTTT
TTATGAGTCAAAATATAATTATTAACTTTGTGCATATTGTGTTTATCTGCTCTTCTTGTT
CTGTAAATATGATCATATAAAAATTCCTATTTCATCTGCTGACGAGAATGCAAGCGATAA
TGTATTTCAATGTAATGCACCAATATTAAGATGAGCATATGGTAATTCCTGAAAGTATTG
TCTACCTTTCAGCTTCTATCTTCAAATTTCAAAACTGATAAGTAGGTGACTGCAGTGGCC
AAACTTATGTTCAATTTAAGAAAAAAAGGCTTAACAAGCATACATATGTTTGTTTCTCAC
TGCTCCGAGGTCATCCATGACCAGCTACTTCCTAAAGCAGTTCTCACAGAATTTATTTTC
CTATTCAGGGAAATTGGTGCCACGAATACAGGAAACTGAAGGCCAAAATTGAGACCATAC
AAAGATGCCACAAGCACCTGATGGGAGAGGATCTGGAGTCTTTGAATCCAAAAGAGCTCC
AACAACTAGAGCAGCAGCTGGAGAGCTCACTGAAGCACATCAGATCAAGAAAGAGCCACC
TTATGGCCGAGTCAATTTCTGAGCTTCAGAAGAAGGAGAGGTCACTGCAGGAGGAGAACA
AGGCTCTACAGAAGGAACTTTCAGAGAGGCAGAAGGCGGTCGCTAGCCGGCAGCAGCAGC
AGCAGCAGGTGCAGTGGGACCAGCAGACACAGGTCCAGGTCCAGACAAGCTCATCGTCTT
CTTCCTTCATGATGAGGCAGGATCAACAGGGACTGCCACCTCCACAAAACATCTGCTTCC
CGCCGTTGAGCATCGGAGAGAGAGGCGAAGAGGTGGCTGCGGCGGCGCAGCAGCAGCTGC
CTCCTCCTCCGGGGCAGGCGCAACCACAGCTCCGCATCGCAGGTCTGCCGCCATGGATGC
TGAGCCACCTCAACGCATAAGGAGGGCGAGCAAATGGCGTGCGAAGTGATTGATTGCTCA
CCGTTGATTGAACGATAGCCTAAGTTCATGGCGGCAGCAAACTAAGCTAAAACTATTGTT
ATGTTTGCAAGGAAGGGTAGGGTAACCCGCTGTGTAATCTTTGTCCAGCTAGCATGTACC
AACTGAGATGCATGCATGCTTATTATTGTCCAATTACCCGTGAATCTAGCGGTGCTTTTG
GTGAGAGGCCGGCCGGTCGGGTGCAGTTTACTTCAAATATGGTTTGTGATTTTGTGTAAA
TAGTATTAACTAGGAGTCCTATGGTAAGTAAATTAATTAATGGGAGGATGCATGAATAAA
ACCTCTCTTGTGCTGCAGA