Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018657_T056
CDS Infomation	cds chromosome:B73_RefGen_v4:7:2061484:2074737:-1 gene:Zm00001d018657 gene_biotype:protein_coding transcript_biotype:protein_coding description:PHD finger family protein
Sequence	ATGGACCCCGCCGCCGGCGGGGGCCGGGGCCGGGACCGGGCGGGCTTCGAGCGGGCGTGC CGGCTGCCCAACACCGTCCACTCCGAGGTCCTGCCGTCGCTGCCGCTCCCCACCCTCCCG CGCGAGCTCGGCTTCGACGCGCTCCGCGACGACGAGCCCCTCGCCGCGCCCGACCGCCCC GACACGATCATGCAGGCCGCCAACATCGCCCGCGTCCTCGCCGACACCGACGTCTCCCAC CTGGGCTTCACCGCTGCGGACAACGTCGACGTGGACCCCATCCGCTGCTCCTGGCTCTGG AGGGAGGTGCTCAAGCACAACCCCGACGCTTTCAAGGTCAAGGCGCCAAGTCCGTCTTCG CAAGGTCCATTTGGAGGCCCAGGATATCAAAATCAAGAACATGAGAAGCACTTTGAGCAT TTTACACCTAATACGAGCAAAGCACGAAATGAATCTGCATTTCCTCAGGATGAAATTGAC TCACATAGAGAGCATTTTTATAATGAACTGACCTCAGATTCAATTGCTTCAAAGAAGCCA AAAATAAGGAAGAGAGAAAATAACAATTCTGTTTCAAGTTCTGCTCCCAGCATTCCTAAT ACTCAAGATGTTATCACTACCTTCTGTGAGGTGGTGGAGGATTTCTGTGGAAAAACCGAA ATTCCTGATGATGGAGATGGCGGTGACTGGTTGTCAATCCCACTTGGTGATGTTAAGGTT CTCGTGAATGAAATTACATCTGTTCGATCCAAAAGGATATTGCATGAGGTTCCTATGGAT ACAGTTACAAGGTTATTGGATGTGATTGACCGTCAGATTCGATATTCTCAAGGTTTGTCG ATAGATGTGAAAGAAAATTCTGATGTCGTTGATGCTGAACCTCTGGTTTTCTCTGCTTTG GAGGCCAGTCATGCTGCGTTGGCAATTATGACCCACCATGATATGCCAAAGCAACTGTAC CGAGAAGAACTTATTGAGCGGATTATTGATTTCTCAAGGCATCAGATCACAGATTGTATG GCAGCAAGTAACCCAACCTTCCGAGCTCTCTACAAACCAGCTGAAAATGTTGCAAATGAT GGAGATGATGATGAAGATGATTTGGAAAATGGACAAGTTAGCAAGAGGAGACGTACTGCT ACTAATTTGAGCATGAGAAAATCTTCAAACAAACTTTCTGCTTCTGTTTATTCTGCTGTG CAGAAACTATGCTTGATATTGGGCTTTCTTAAGGAACTGCTCACAACAGTGCGCTTGTCA GATGGTTGTATTCTGCAGTTAGCGAAAACATGCTTTACTACATTCTTGGTGGATAATATG CAGCTATTACAATTAAAAGCAATCGGGGTTATTTGCACGGTGTTTTCGTCATACACACAG CACAGGAGTTACTTGGTTGATGAAATACTTCACCTTCTTCGCAAGTTGCAGTTTTCCAAA AATGCCGTCAGAACCTACCATCTAGCAGATGAAGACCAAAAGCAAATCCAGATGATAACA GCACTGTTAGTTCACCTGGTTCAGTTTAGTGCAATTGTTCCCAATAGCTTAAAAGGAACA GTTGATTGGACCACTATTGTTGATGCCTCCGGAGATGCTGATTATTATCCAATTAAATGC CATGAAGCGGCAACAGAGGCTTGTTGCCGTTTTTGGACTGATGTCCTTCAACGTTTTACT GCTGCTAAATCTCAAGATATGTCGGAAACCAAAGGAATAATAGATAATCTTGTTCAGGAT TTCCTAATGATACTAAACTTGCCGGAGTATCCAGCTGCTGCTTCTATCCTTGAGGTTCTC TGTGTGTTGCTCCTTCAGAATGCTGGATTGAAATCTAAGGACACTAATGTTCGGTGCTTT GCTATTGATCTTCTTGGTGGTATTGCATCAAGATTGAAGCATGATTCGGTCATCTGTAGT GAAGAGAAGCTTTGGATATTGCAAGATCTCACTGATGCAGGTAGCGATGGCTCAAAAATC TTGAAAAACAAGTGCTGTGTTTGTCTTGGTGGAAGAGGTATAAATATAGCCTGTAATGAA TGTGGAAGATGTTTCCATTCAGATTGTATGGGGGCTGCTAGCCAGGATAACTTAGAGCGT GATAGTGTTTGCCCCTTGTGTTTTTGCAAACAACAGCTCAATGTGCTACAGACGTACTGT CAGTCACAAATTAAAGAAAATGGCAAAAAAACTGCTGCGTCTACTAGTAAGAAATCTGCT AAACCAGCTGAGGTGCCAGCAGTGGATATTATTCAACAAATACTACTGAGTTATCTCCAA GAATCTGGTCCACAAGATGATGGGAACCTGTTTACTCGATGGTTCTATCTGTGCATCTGG AACAAAGAAAACCAACATTCTCAGGAGGAGATCATCTACTATCTCGCTAGATTAAAATCA AAAGAGATTCTGCGAGATTCTGGCAATGGTCTGGCAATTTCCAGAGATTCAGCAAAGAAA ATTTGCTTGGCACTTGGTCAGAAGAACTCATTTTGCAGGGGTTTTGATAAAATTCTTGCT CTTCTTTTGGCTAGCTTGAGAGAAAATTCTCCTGTAATAAGAGCAAAAGCCTTGCGTGCG GTCAGCAGTATAGTTGAAGCTGACCCTGAGGTCTTGGGTGACAAACGTGTCCAATCTGCT GTCGAAGGGAGGTTTTGTGATTCGGCTATTTCTGTTCGTGAAGCTGCCCTTGAACTTGTT GGGAGGCATATTGCTTCACATCCTGATGTGGGCCTGAAGTATATAGAAAAAGTTGCTGAG CGAATAAAGGACACTGGAGTCAGCGTTCGCAAGCGTGCAATCAAAATTATAAGGGATCTA TGTGCTTCTAATCCAAACACAGACACAACACATGCCTTTGTGGAGATAATTTCTCGTGTT AATGATGAGGAATCCAGTGTACAGGATCTTGTATGTAAAACATTTTATGAACTATGGTTT GAAGAACCAACTGGGAGCCATAAGCACTTGGTTGCTGATGGAAGTTCAGTTCCAATGGAG ATAGCTAAAAAGACTGAGCAAATTGTTGACATGTTGAGGAAGATGACCAATCACCAACCT CTGATTACCATCATAAAACGTAACTTGACTCTTGATTTCCTCCCTCAGTCAACCAAGGCT GCAGGGATTAACTCATACATGGTGGCATCAATTCAGAAGCGTTGCGAATTAATATGCAAA CGCTTATTAGAAAGAATATTGCAGGTTGAGGAGGGAGCTGCTAAGGAGATGGAAATCCAC ATGCTTCCTTATATTGTTGCTTTGCAAGCATTTTGTATTGTTGATCCCACGCTCTGCATT CCAGTAACTGATCCTTCTAAGTTTGTTGTGACACTACAACCATACCTTAATATTCAGGTT GACAGTAAATCAGCTGCCCAGTTGCTTGAAAGTATTATTTTTGTGATTGATGCTGTTCTT CCACTCATAAGGAAGCCAACACAAAATGTTGTTGAAGAACTTGAGAAAGATCTGAAACAT ATGATAGTTCGCCATTCGTATTTGACAGTTGTACATGCCTGTATCAAGTAA

Peptide Sequence

PEP ID	Zm00001d018657_P056
PEP Infomation	pep chromosome:B73_RefGen_v4:7:2061484:2074737:-1 gene:Zm00001d018657 transcript:Zm00001d018657_T056 gene_biotype:protein_coding transcript_biotype:protein_coding description:PHD finger family protein
Sequence	MDPAAGGGRGRDRAGFERACRLPNTVHSEVLPSLPLPTLPRELGFDALRDDEPLAAPDRP DTIMQAANIARVLADTDVSHLGFTAADNVDVDPIRCSWLWREVLKHNPDAFKVKAPSPSS QGPFGGPGYQNQEHEKHFEHFTPNTSKARNESAFPQDEIDSHREHFYNELTSDSIASKKP KIRKRENNNSVSSSAPSIPNTQDVITTFCEVVEDFCGKTEIPDDGDGGDWLSIPLGDVKV LVNEITSVRSKRILHEVPMDTVTRLLDVIDRQIRYSQGLSIDVKENSDVVDAEPLVFSAL EASHAALAIMTHHDMPKQLYREELIERIIDFSRHQITDCMAASNPTFRALYKPAENVAND GDDDEDDLENGQVSKRRRTATNLSMRKSSNKLSASVYSAVQKLCLILGFLKELLTTVRLS DGCILQLAKTCFTTFLVDNMQLLQLKAIGVICTVFSSYTQHRSYLVDEILHLLRKLQFSK NAVRTYHLADEDQKQIQMITALLVHLVQFSAIVPNSLKGTVDWTTIVDASGDADYYPIKC HEAATEACCRFWTDVLQRFTAAKSQDMSETKGIIDNLVQDFLMILNLPEYPAAASILEVL CVLLLQNAGLKSKDTNVRCFAIDLLGGIASRLKHDSVICSEEKLWILQDLTDAGSDGSKI LKNKCCVCLGGRGINIACNECGRCFHSDCMGAASQDNLERDSVCPLCFCKQQLNVLQTYC QSQIKENGKKTAASTSKKSAKPAEVPAVDIIQQILLSYLQESGPQDDGNLFTRWFYLCIW NKENQHSQEEIIYYLARLKSKEILRDSGNGLAISRDSAKKICLALGQKNSFCRGFDKILA LLLASLRENSPVIRAKALRAVSSIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELV GRHIASHPDVGLKYIEKVAERIKDTGVSVRKRAIKIIRDLCASNPNTDTTHAFVEIISRV NDEESSVQDLVCKTFYELWFEEPTGSHKHLVADGSSVPMEIAKKTEQIVDMLRKMTNHQP LITIIKRNLTLDFLPQSTKAAGINSYMVASIQKRCELICKRLLERILQVEEGAAKEMEIH MLPYIVALQAFCIVDPTLCIPVTDPSKFVVTLQPYLNIQVDSKSAAQLLESIIFVIDAVL PLIRKPTQNVVEELEKDLKHMIVRHSYLTVVHACIK

Transcript Sequence

Transcript ID	Zm00001d018657_T056
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:2061484:2074737:-1 gene:Zm00001d018657 gene_biotype:protein_coding transcript_biotype:protein_coding description:PHD finger family protein
Sequence	AAATCAAATCGAACCACCTCCACCTCGGCAACGAGCGAATTCCGGTGCGAATTGGAGCCC TCCTCCCCCCGCATCTAGGGTTTCGCCCATGGACCCCGCCGCCGGCGGGGGCCGGGGCCG GGACCGGGCGGGCTTCGAGCGGGCGTGCCGGCTGCCCAACACCGTCCACTCCGAGGTCCT GCCGTCGCTGCCGCTCCCCACCCTCCCGCGCGAGCTCGGCTTCGACGCGCTCCGCGACGA CGAGCCCCTCGCCGCGCCCGACCGCCCCGACACGATCATGCAGGCCGCCAACATCGCCCG CGTCCTCGCCGACACCGACGTCTCCCACCTGGGCTTCACCGCTGCGGACAACGTCGACGT GGACCCCATCCGCTGCTCCTGGCTCTGGAGGGAGGTGCTCAAGCACAACCCCGACGCTTT CAAGGTCAAGGCGCCAAGTCCGTCTTCGCAAGGTCCATTTGGAGGCCCAGGATATCAAAA TCAAGAACATGAGAAGCACTTTGAGCATTTTACACCTAATACGAGCAAAGCACGAAATGA ATCTGCATTTCCTCAGGATGAAATTGACTCACATAGAGAGCATTTTTATAATGAACTGAC CTCAGATTCAATTGCTTCAAAGAAGCCAAAAATAAGGAAGAGAGAAAATAACAATTCTGT TTCAAGTTCTGCTCCCAGCATTCCTAATACTCAAGATGTTATCACTACCTTCTGTGAGGT GGTGGAGGATTTCTGTGGAAAAACCGAAATTCCTGATGATGGAGATGGCGGTGACTGGTT GTCAATCCCACTTGGTGATGTTAAGGTTCTCGTGAATGAAATTACATCTGTTCGATCCAA AAGGATATTGCATGAGGTTCCTATGGATACAGTTACAAGGTTATTGGATGTGATTGACCG TCAGATTCGATATTCTCAAGGTTTGTCGATAGATGTGAAAGAAAATTCTGATGTCGTTGA TGCTGAACCTCTGGTTTTCTCTGCTTTGGAGGCCAGTCATGCTGCGTTGGCAATTATGAC CCACCATGATATGCCAAAGCAACTGTACCGAGAAGAACTTATTGAGCGGATTATTGATTT CTCAAGGCATCAGATCACAGATTGTATGGCAGCAAGTAACCCAACCTTCCGAGCTCTCTA CAAACCAGCTGAAAATGTTGCAAATGATGGAGATGATGATGAAGATGATTTGGAAAATGG ACAAGTTAGCAAGAGGAGACGTACTGCTACTAATTTGAGCATGAGAAAATCTTCAAACAA ACTTTCTGCTTCTGTTTATTCTGCTGTGCAGAAACTATGCTTGATATTGGGCTTTCTTAA GGAACTGCTCACAACAGTGCGCTTGTCAGATGGTTGTATTCTGCAGTTAGCGAAAACATG CTTTACTACATTCTTGGTGGATAATATGCAGCTATTACAATTAAAAGCAATCGGGGTTAT TTGCACGGTGTTTTCGTCATACACACAGCACAGGAGTTACTTGGTTGATGAAATACTTCA CCTTCTTCGCAAGTTGCAGTTTTCCAAAAATGCCGTCAGAACCTACCATCTAGCAGATGA AGACCAAAAGCAAATCCAGATGATAACAGCACTGTTAGTTCACCTGGTTCAGTTTAGTGC AATTGTTCCCAATAGCTTAAAAGGAACAGTTGATTGGACCACTATTGTTGATGCCTCCGG AGATGCTGATTATTATCCAATTAAATGCCATGAAGCGGCAACAGAGGCTTGTTGCCGTTT TTGGACTGATGTCCTTCAACGTTTTACTGCTGCTAAATCTCAAGATATGTCGGAAACCAA AGGAATAATAGATAATCTTGTTCAGGATTTCCTAATGATACTAAACTTGCCGGAGTATCC AGCTGCTGCTTCTATCCTTGAGGTTCTCTGTGTGTTGCTCCTTCAGAATGCTGGATTGAA ATCTAAGGACACTAATGTTCGGTGCTTTGCTATTGATCTTCTTGGTGGTATTGCATCAAG ATTGAAGCATGATTCGGTCATCTGTAGTGAAGAGAAGCTTTGGATATTGCAAGATCTCAC TGATGCAGGTAGCGATGGCTCAAAAATCTTGAAAAACAAGTGCTGTGTTTGTCTTGGTGG AAGAGGTATAAATATAGCCTGTAATGAATGTGGAAGATGTTTCCATTCAGATTGTATGGG GGCTGCTAGCCAGGATAACTTAGAGCGTGATAGTGTTTGCCCCTTGTGTTTTTGCAAACA ACAGCTCAATGTGCTACAGACGTACTGTCAGTCACAAATTAAAGAAAATGGCAAAAAAAC TGCTGCGTCTACTAGTAAGAAATCTGCTAAACCAGCTGAGGTGCCAGCAGTGGATATTAT TCAACAAATACTACTGAGTTATCTCCAAGAATCTGGTCCACAAGATGATGGGAACCTGTT TACTCGATGGTTCTATCTGTGCATCTGGAACAAAGAAAACCAACATTCTCAGGAGGAGAT CATCTACTATCTCGCTAGATTAAAATCAAAAGAGATTCTGCGAGATTCTGGCAATGGTCT GGCAATTTCCAGAGATTCAGCAAAGAAAATTTGCTTGGCACTTGGTCAGAAGAACTCATT TTGCAGGGGTTTTGATAAAATTCTTGCTCTTCTTTTGGCTAGCTTGAGAGAAAATTCTCC TGTAATAAGAGCAAAAGCCTTGCGTGCGGTCAGCAGTATAGTTGAAGCTGACCCTGAGGT CTTGGGTGACAAACGTGTCCAATCTGCTGTCGAAGGGAGGTTTTGTGATTCGGCTATTTC TGTTCGTGAAGCTGCCCTTGAACTTGTTGGGAGGCATATTGCTTCACATCCTGATGTGGG CCTGAAGTATATAGAAAAAGTTGCTGAGCGAATAAAGGACACTGGAGTCAGCGTTCGCAA GCGTGCAATCAAAATTATAAGGGATCTATGTGCTTCTAATCCAAACACAGACACAACACA TGCCTTTGTGGAGATAATTTCTCGTGTTAATGATGAGGAATCCAGTGTACAGGATCTTGT ATGTAAAACATTTTATGAACTATGGTTTGAAGAACCAACTGGGAGCCATAAGCACTTGGT TGCTGATGGAAGTTCAGTTCCAATGGAGATAGCTAAAAAGACTGAGCAAATTGTTGACAT GTTGAGGAAGATGACCAATCACCAACCTCTGATTACCATCATAAAACGTAACTTGACTCT TGATTTCCTCCCTCAGTCAACCAAGGCTGCAGGGATTAACTCATACATGGTGGCATCAAT TCAGAAGCGTTGCGAATTAATATGCAAACGCTTATTAGAAAGAATATTGCAGGTTGAGGA GGGAGCTGCTAAGGAGATGGAAATCCACATGCTTCCTTATATTGTTGCTTTGCAAGCATT TTGTATTGTTGATCCCACGCTCTGCATTCCAGTAACTGATCCTTCTAAGTTTGTTGTGAC ACTACAACCATACCTTAATATTCAGGTTGACAGTAAATCAGCTGCCCAGTTGCTTGAAAG TATTATTTTTGTGATTGATGCTGTTCTTCCACTCATAAGGAAGCCAACACAAAATGTTGT TGAAGAACTTGAGAAAGATCTGAAACATATGATAGTTCGCCATTCGTATTTGACAGTTGT ACATGCCTGTATCAAGTAAATACATCACCTCTTCAACTCCCTAATTATTGTTCGATGAGC ATTGTTTCTCCCTACATTCTATATGGAGTTGAGAATTCATTTTATGAGTTCATGTCACAG CCCTGATCTGGGGCCGGTTTGGCGTCTGTTGCCGGCGGCTATGGTTGGGGACGGCGGGCT ATAGGGGGTGGCTGTTGCTAGGGCAGCAACAGCGCAGAGAGAGGGGCGTCAGCGGCATGA GAGAGAGAGGGAGGTAGGGAGAGCAATTGCTCTATTCCTTGCTTAGGTTGAAACGGTTAC ATTGTCCTTATATTTATAGTACCTAGAAGACTTGTACTCCAAGCAAAATATAGGAAGAGT CCTTATAGATTTGGACTTATTTCCTAACCAAACAGTCCTATTTCCTAAATAAACTCGATC TTATTTTCTAAACAATTATTTATTCGTTTCCACTAATTTTATCCTAAACTTCCTTTTATT CCGAATCCTCCTGTATATTGGGAGATTGAGGGGACGGCGGTGGCCTACTCCTTGGCTGCG TTCCGGGTGGCCTTGAGGCTGGCCAGGGCTTGGTCCTGGGCCTCTCCTGGCCAGTTTGGC CTAACGTTGTGGTCCAGATTGGATGTGTGACAGTTCATATGCTATTGATGTAATTTAGAC GATATTTTTTTATTTTGAAGATTTTTTATTCTTTGTATACTTTTATGTCCAGTTCTGCAC CATTACATAACTTTTTATTTCATTTCACTACTCTCTCTTAAGTCTTAACATCTTACATAT TTCTTATCTGAGTTGTTCCTACAAAACAACATTTTCTTTTTTTTTTATCGAACGCGCAGA GAGAACTGTACATCTTTATATTAAAAGGGAAGGAGACAAACCCAAAGGGTTTTACAAGTA AGAGATCCTG