Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018626_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:7:1327873:1335559:1 gene:Zm00001d018626 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer arm dynein light chain 1 protein
Sequence	ATGCATGCAGCGTCAAAGAAGGATTATCAGTTGGAGTCCATGACTGGCTCAGTTCGTTCA AACCAGATGACAGAAGAAAATAACCGTTCAGCTGTTAGTGGTCATTGTGGCAGTAGCCCA TCATCTCATCAAGAATGCTGTAGGTCAGAAGACTTGAATAGATATGTGTGCTCTGATGAG GGCAAGGAGGTTGGGCACCTAAAGAAGAGTCAGTCGCTTGTAAACATGCTTCAAAAGGAT CATGGTCGTAATTCTAGCGAAGGCTCTGAGGTTGATGTTACAAACCATGAACACAAATAT GATCCCTCTAATTTGAAGAGATCTGAAGTTGTTGGAGAATCTAGTAAGCTGTACAGACTG AAAAATGAGGATGATTTTGATGCCTCATCTGACCTAATCAGCCATGACTTTTGTGAACCT TTAGGTGATCACACTGTTGATTCTGATAGCCATCATGACATGCCTTATTCCCAAAGCAAT CTCCCAAGATCACAATCTGCAATATTTCAGAATGATTGCACCAGTGATCCAGAAGGTTCT GTCGATTCTGAGATACTAGGGTGCAGATCTGTTGACGGTTTATGTTCACTGACTGATGAG AAATTTGACTACCTGAGAGGTGGTGAAATGTATCACTGTAAATCAAATTTGGATGTTTAT TGTGCACCTTCTCCAAATATGCACCGGGCATCAAACATTGACGACCATGGTTCAGTAGGT TGCTCTGATGTTGCTGCAGAGGGTCAACGGTCCACTGGAAGCACAGAAGAATTTTTTGTC AGGGATGGGATCCTAGTAGGTCACGAATACTGGGATGGCAAATACATTTGTGGCGATCAC TCGCTGGGTCCAGTTGCCCTTTTCTGTGCAGATTATTACCATTCTGGGAATGATGTCGAC CTCAGTGAAGCTACAGGTCAAGAGAGAGAGCTGTCGAACAGAGATAGCACACTCCACCAG TCGCTTGTAGTGGAAGTACCTGAGTCGGTGAGCATTTCTGATACAAACGACATTAGTGGG GAACCTGAACACAGTAGAACTGACATTGATGAGGACCCAAGTGAACTTACTCCAAGAACC TACAATATTAAAAGAATCGAGGATTGGATCAATCAGATTGATATCAATGATATCGCTTTG GATGGGCAAGGAGAGAATTCAGTTTCTGCTTTAGCCAAATCTCGTGAACCGATGGCTGGC GTTCCTGCTGTGCGGCCTGATGCTAAAAGCCCGCTTGGTATGGAGATAGCTTACACTTAT ATTTCGAAGTTAACTCCTGCTTCATCATCGGCACAGTTGGCAAACCTTGGTTTGGTTGCG ATCCCAAGACTGAGCGCATTCTCAGGTTTGCGCGTATTAAACTTATCAGGGAACTCAATT GTGCGAGTAACAGCAGGAGCTCTTCCAAAAGGCCTTCACATGTTAAGCCTGTCAAAGAAT AACATATCAACAATTGAAGGCCTTAGAGAGTTGACACGATTGCGCTTGTTGGATATCAGC TATAATAGAATATCTAGAATTGGCCATGGATTGGCCTCCTGTTCCTCGTTGAAGGAGTTA TATCTGGCCGGTAACAAGATCAGTGAGGTAGATGGTCTTCACCGGCTTCTGAAGCTCAAG ATTCTGGACTTGCGCCACAACAAGATTTCTACATCAAAGGGCCTCGGGCAGCTAGCTGCG AATTACAACTCTCTAGAAGCCATTAACCTTGCCGGCAACCCTGCACAGAAGAATGTAGGC GATGAGCACCTGAAGAAGTACCTGCTTGGTCTCCTGCCAAACCTCGCTGTGTACAACAAG CAGCCTATTAGGGCGACTGGATCAAAAGACGTCTCGGACCGCCATACCCGCAAGATCTCT TCTTCGCACCATTCTGACCGTGGTGGCAGACCCGACCGCAGATCTTCCAGGTTGGTGGGT GCCCCGTCTGCTCACAAGCCACAGAGCTCGCGGCATGGACGCTCTGGATATGTGTCAAGC TCAGCGCTCAAGTACACGAGAGCCCGCAACACGCACAAGACCTCGCTGGGGTCAAGGCCC CTTGAACATGCGAGTGCCATAGATCTGGCGAAGCAAACCCAGACAGAGGGAAGGACACAG TAA

Peptide Sequence

PEP ID	Zm00001d018626_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:7:1327873:1335559:1 gene:Zm00001d018626 transcript:Zm00001d018626_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer arm dynein light chain 1 protein
Sequence	MHAASKKDYQLESMTGSVRSNQMTEENNRSAVSGHCGSSPSSHQECCRSEDLNRYVCSDE GKEVGHLKKSQSLVNMLQKDHGRNSSEGSEVDVTNHEHKYDPSNLKRSEVVGESSKLYRL KNEDDFDASSDLISHDFCEPLGDHTVDSDSHHDMPYSQSNLPRSQSAIFQNDCTSDPEGS VDSEILGCRSVDGLCSLTDEKFDYLRGGEMYHCKSNLDVYCAPSPNMHRASNIDDHGSVG CSDVAAEGQRSTGSTEEFFVRDGILVGHEYWDGKYICGDHSLGPVALFCADYYHSGNDVD LSEATGQERELSNRDSTLHQSLVVEVPESVSISDTNDISGEPEHSRTDIDEDPSELTPRT YNIKRIEDWINQIDINDIALDGQGENSVSALAKSREPMAGVPAVRPDAKSPLGMEIAYTY ISKLTPASSSAQLANLGLVAIPRLSAFSGLRVLNLSGNSIVRVTAGALPKGLHMLSLSKN NISTIEGLRELTRLRLLDISYNRISRIGHGLASCSSLKELYLAGNKISEVDGLHRLLKLK ILDLRHNKISTSKGLGQLAANYNSLEAINLAGNPAQKNVGDEHLKKYLLGLLPNLAVYNK QPIRATGSKDVSDRHTRKISSSHHSDRGGRPDRRSSRLVGAPSAHKPQSSRHGRSGYVSS SALKYTRARNTHKTSLGSRPLEHASAIDLAKQTQTEGRTQ

Transcript Sequence

Transcript ID	Zm00001d018626_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:7:1327873:1335559:1 gene:Zm00001d018626 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer arm dynein light chain 1 protein
Sequence	ATTCCTCACTGCCGCCGCCGCCGCGCCGCCTGCTTCCGGGAGAGCCCCCACCTAGAGGAA GCTCCTCCGGTCCTCCCATCCTCCTCCTCATCCAATCGTGCCAACCCGACCCATCTCATC ACCCGTCCAAGGGCGGAGCCGTCGTTCCCGTGCCTCCCGAGACCCATCCAACCCATCCGG GCTTGGATTGCTTTCGAATCGAATCTCCTGGATTTTTCCACCACACACATGCATCCTTTT GGATTTGTTTAGTTCATAAGCCCTTCAGACTGGCAGATATCAAGAGGTCATACACATCTC GCACCTCTAAGTGGGTGTGGGTCTGCAACAATTCTGCAACCACCTTATCCTTGCCTTTGG GAGTAAGCCCGACCTACATCTGGAGGCTTCGTCGAGCCTTGGAAGGCCTTTTTGTTGATT ACGGCTAATTTCCAATGGCAGCTGAGATGTAACAAATTTGCTCAGTTCAGTTCTCTAGGA AAAGTTCCCGTGGTTCAGCAATGTGATTGGTTTCATAGGTTTTTTCGTGTGTTGGTGATC AAAGCAATCTGGTGTAAGCTTGCGTAGTTGACATCAGAGTTTGTTTCTTATGGTTAGGTT CTTTTGCTTTTCATCCTCTACTGCACATCACAGATCCAAGGTATAGACAAGTACCTCCTG TATTTTTACTGCTTCCTGTTGCATTCCCATGAAGAAGAGACTAGTTTTGATCCTACTACA GTAACTCACATCTTATTCTGTTCTCTTATTAGGAGGTTTTTTCCCCAGCAGATGAAACCA TGCATGCAGCGTCAAAGAAGGATTATCAGTTGGAGTCCATGACTGGCTCAGTTCGTTCAA ACCAGATGACAGAAGAAAATAACCGTTCAGCTGTTAGTGGTCATTGTGGCAGTAGCCCAT CATCTCATCAAGAATGCTGTAGGTCAGAAGACTTGAATAGATATGTGTGCTCTGATGAGG GCAAGGAGGTTGGGCACCTAAAGAAGAGTCAGTCGCTTGTAAACATGCTTCAAAAGGATC ATGGTCGTAATTCTAGCGAAGGCTCTGAGGTTGATGTTACAAACCATGAACACAAATATG ATCCCTCTAATTTGAAGAGATCTGAAGTTGTTGGAGAATCTAGTAAGCTGTACAGACTGA AAAATGAGGATGATTTTGATGCCTCATCTGACCTAATCAGCCATGACTTTTGTGAACCTT TAGGTGATCACACTGTTGATTCTGATAGCCATCATGACATGCCTTATTCCCAAAGCAATC TCCCAAGATCACAATCTGCAATATTTCAGAATGATTGCACCAGTGATCCAGAAGGTTCTG TCGATTCTGAGATACTAGGGTGCAGATCTGTTGACGGTTTATGTTCACTGACTGATGAGA AATTTGACTACCTGAGAGGTGGTGAAATGTATCACTGTAAATCAAATTTGGATGTTTATT GTGCACCTTCTCCAAATATGCACCGGGCATCAAACATTGACGACCATGGTTCAGTAGGTT GCTCTGATGTTGCTGCAGAGGGTCAACGGTCCACTGGAAGCACAGAAGAATTTTTTGTCA GGGATGGGATCCTAGTAGGTCACGAATACTGGGATGGCAAATACATTTGTGGCGATCACT CGCTGGGTCCAGTTGCCCTTTTCTGTGCAGATTATTACCATTCTGGGAATGATGTCGACC TCAGTGAAGCTACAGGTCAAGAGAGAGAGCTGTCGAACAGAGATAGCACACTCCACCAGT CGCTTGTAGTGGAAGTACCTGAGTCGGTGAGCATTTCTGATACAAACGACATTAGTGGGG AACCTGAACACAGTAGAACTGACATTGATGAGGACCCAAGTGAACTTACTCCAAGAACCT ACAATATTAAAAGAATCGAGGATTGGATCAATCAGATTGATATCAATGATATCGCTTTGG ATGGGCAAGGAGAGAATTCAGTTTCTGCTTTAGCCAAATCTCGTGAACCGATGGCTGGCG TTCCTGCTGTGCGGCCTGATGCTAAAAGCCCGCTTGGTATGGAGATAGCTTACACTTATA TTTCGAAGTTAACTCCTGCTTCATCATCGGCACAGTTGGCAAACCTTGGTTTGGTTGCGA TCCCAAGACTGAGCGCATTCTCAGGTTTGCGCGTATTAAACTTATCAGGGAACTCAATTG TGCGAGTAACAGCAGGAGCTCTTCCAAAAGGCCTTCACATGTTAAGCCTGTCAAAGAATA ACATATCAACAATTGAAGGCCTTAGAGAGTTGACACGATTGCGCTTGTTGGATATCAGCT ATAATAGAATATCTAGAATTGGCCATGGATTGGCCTCCTGTTCCTCGTTGAAGGAGTTAT ATCTGGCCGGTAACAAGATCAGTGAGGTAGATGGTCTTCACCGGCTTCTGAAGCTCAAGA TTCTGGACTTGCGCCACAACAAGATTTCTACATCAAAGGGCCTCGGGCAGCTAGCTGCGA ATTACAACTCTCTAGAAGCCATTAACCTTGCCGGCAACCCTGCACAGAAGAATGTAGGCG ATGAGCACCTGAAGAAGTACCTGCTTGGTCTCCTGCCAAACCTCGCTGTGTACAACAAGC AGCCTATTAGGGCGACTGGATCAAAAGACGTCTCGGACCGCCATACCCGCAAGATCTCTT CTTCGCACCATTCTGACCGTGGTGGCAGACCCGACCGCAGATCTTCCAGGTTGGTGGGTG CCCCGTCTGCTCACAAGCCACAGAGCTCGCGGCATGGACGCTCTGGATATGTGTCAAGCT CAGCGCTCAAGTACACGAGAGCCCGCAACACGCACAAGACCTCGCTGGGGTCAAGGCCCC TTGAACATGCGAGTGCCATAGATCTGGCGAAGCAAACCCAGACAGAGGGAAGGACACAGT AAGATCAGTCAAGCACGACCATCGATATACTACCATGGTATTGTTGTGAAGTAAAGCGAG GCACCAGTTTTGCTGGTGGATTTTTTTTCTCTCTCACGTGAATAAAGCTCAAAACAGTAA ACAGAGCAGTGCTTTCATATCAGCCCATATTTTTTTTTCTAATATTGTTGAGTGGTATTG ATGGCAATTGGGAATTGTATGATTTACTTGCCTTATGAATAAAGCTTGAAAGAAACAAAA TAAAGATTAGTATTTTTT