Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018516_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:5:222352429:222356952:-1 gene:Zm00001d018516 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable DEAD-box ATP-dependent RNA helicase 48
Sequence	ATGACTCGTTGCTCCGTGAGTTGCCAGCCATGTGTCGACCTGAGGCCATTGGTTGCTAGT GGGCTTACTGAGGATGGGAATGGAAGGAAGGACACGCCATTGGCACAGTTTAATCAGGAG AGGTTCTACTCGGTGGCTGCGAGGCGATTCGGCAGGAAATGGAGACCAGATTCGTCGGAC CAGGATGACAAGGGCACGTCTGCGCCCAAGAAGAATCTGAGGTTCGGAAAAAAGTTTGGG GCTTCGAGCGAAGAGGATTCAGAAATTGACGAGTCTGGGGACACAGGTGCCATCAGGAGG AGGTGGAGCAGTGCTGCTCTCAGGAACTGCGATGTGAAGAAGGAAAGGCGGGTGCTCAAG TCTTACGAGGAGGAAAGCAATGATCTCGCGGGTAGAATCCAAGAGCTGCGAGAGGAGATT AGAAATAGGGAGGTTTTGGGCACTGAGAGGAGGCGTTACGAGTCCAGGGGTGAATCTCTG CTTACCAGTAAAAGATTTGATCAGTGTGGTGTCTCCGCGCTGACAGTCAAAGCACTTACT GATGCTGGATATGTACAGACAACTGTGGTTCAAGAGGCAGCTCTTCCTATATGTCTTGAA GGTAAAGATGTTCTTGTCAAGGCCAAAACTGGAACCGGCAAAAGTGCAGCTTTTCTGCTT CCTGCAATTGAATCAGTCTTGAATGCTATGAAGAGCAATACAAATCAGCGAGTATCTCCA ATATTTGCTCTTGTCCTATGCCCTACAAGAGAGCTTGCTATTCAGCTTACAGCTGAAGCA AATGTCTTGTTAAAGTACCATGAAGGAATTGGTGTTCAATCTCTTATTGGTGGCACTAGA TTCAAGCTTGATCAGAGACGATTAGAATCTGATCCATGCCAGATTTTAGTTGCAACACCT GGTAGACTGCTGGATCACATTGAAAACAAATCATCATTCTCTGTTCGTTTGATGAGATTG AAATTGCTTGTGTTGGATGAAGCTGATCATTTGCTAGATCTGGGTTTCCGTAAAGACATA GAAAAGATTGTCGATACCTTGCCACGTCAAAGACAAACATTGCTCTTCTCAGCTACTATT CCAAAAGAGGTTCGAAGAGTTTCACAGCTAGTATTAAAGAGGGATCACGTTTTTGTTGAC ACAGTGGGCCTTGGAGCTGTTGAAACCCCAACTAAGGTTCAGCAGTCATGTCTTGTGGTG CCACATGAGCTGCATTTTCATACGGTTCATCACCTGCTTCGAGAGCATATTGATCGTGAA GTTGATTACAAGGTTATTGTTTTCTGCACGACAGCCATGGTGACTGAGTTTATGTATATC ATGCTTCGAGATTTGAAGTTAAATGTCAGGGAAATTCACTCGAGGAAACCTCAGCTCTAT AGAACTCGCATATCTGAAGAGTTCCGGGGCTCTAACCGCATAGTTCTCGTAACGTCAGAT GTTTCTACTCGTGGGGTGAACTATCCAGATGTCACCCTTGTGATTCAGGTTGGTGTTCCT CCCGATAGAGAGCATTACATCCATCGGCTTGGAAGGACTGCAAGGGAAGGTAAATCTGGC AAGGGAATTCTTTTGCTTGCGCCATGGGAACAATACTTCTTGGACGAGATAGGCGATCTC CCGATTGACAAGTATCCAGCACCAGACATTGACCAGGAGATGAAGCAAAAGGTTGACGAT TCAATAGAGATGGTTGACATGAGCATCAAAGAAGCAGCATACCATGCGTGGCTGGGTTAC TACAACTCCATCGCTGACATAGGTAGAGATAAAAGAATGGTTGTTGACCTAGCAAATCGA TTTGGTGCCTCGATTGGCCTGGAGAAGCCTCCAGCGATATACCGGAAGACCGCTCTGAAG ATGGGGCTCAAGGATGTCCCTGGGATTCGAATAAGGAAATGA

Peptide Sequence

PEP ID	Zm00001d018516_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:5:222352429:222356952:-1 gene:Zm00001d018516 transcript:Zm00001d018516_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable DEAD-box ATP-dependent RNA helicase 48
Sequence	MTRCSVSCQPCVDLRPLVASGLTEDGNGRKDTPLAQFNQERFYSVAARRFGRKWRPDSSD QDDKGTSAPKKNLRFGKKFGASSEEDSEIDESGDTGAIRRRWSSAALRNCDVKKERRVLK SYEEESNDLAGRIQELREEIRNREVLGTERRRYESRGESLLTSKRFDQCGVSALTVKALT DAGYVQTTVVQEAALPICLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSNTNQRVSP IFALVLCPTRELAIQLTAEANVLLKYHEGIGVQSLIGGTRFKLDQRRLESDPCQILVATP GRLLDHIENKSSFSVRLMRLKLLVLDEADHLLDLGFRKDIEKIVDTLPRQRQTLLFSATI PKEVRRVSQLVLKRDHVFVDTVGLGAVETPTKVQQSCLVVPHELHFHTVHHLLREHIDRE VDYKVIVFCTTAMVTEFMYIMLRDLKLNVREIHSRKPQLYRTRISEEFRGSNRIVLVTSD VSTRGVNYPDVTLVIQVGVPPDREHYIHRLGRTAREGKSGKGILLLAPWEQYFLDEIGDL PIDKYPAPDIDQEMKQKVDDSIEMVDMSIKEAAYHAWLGYYNSIADIGRDKRMVVDLANR FGASIGLEKPPAIYRKTALKMGLKDVPGIRIRK

Transcript Sequence

Transcript ID	Zm00001d018516_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:222352429:222356952:-1 gene:Zm00001d018516 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable DEAD-box ATP-dependent RNA helicase 48
Sequence	GTTGCCTGAATGCCTGCCCGCCGCCAAAACCCATAAACCCTACCCTCCGCGCCCTTGCCG ACCGCTTCCGCAGGCCCGGCGCCGAGGACCTCTGGAACGAGGACGACGGGCCCCTCCGCC GCGTCAAGCGGCCGCCCACTGGGATCGCGTCGGGTGTCCGGCACCAGCAGCAGCAGTTGG ACTCGGGGAAGCCCCGCGGAGGACCGAGTTGGGAGGACCTGACCTCTCTGGATCAACCGA GGCCTTTAGACAGGGGAAAAGGGCCGACCTCGGCCGCGTTCAATCCGAGAAGAGAGTACC TAACGGTGGTGGCGCCCTGGTGCCCGCGTTGGGATCCGCGACCTCTCGGTTTCGTTGCTC CCAAAAAGTCTTATCCGGTGATGACTCGTTGCTCCGTGAGTTGCCAGCCATGTGTCGACC TGAGGCCATTGGTTGCTAGTGGGCTTACTGAGGATGGGAATGGAAGGAAGGACACGCCAT TGGCACAGTTTAATCAGGAGAGGTTCTACTCGGTGGCTGCGAGGCGATTCGGCAGGAAAT GGAGACCAGATTCGTCGGACCAGGATGACAAGGGCACGTCTGCGCCCAAGAAGAATCTGA GGTTCGGAAAAAAGTTTGGGGCTTCGAGCGAAGAGGATTCAGAAATTGACGAGTCTGGGG ACACAGGTGCCATCAGGAGGAGGTGGAGCAGTGCTGCTCTCAGGAACTGCGATGTGAAGA AGGAAAGGCGGGTGCTCAAGTCTTACGAGGAGGAAAGCAATGATCTCGCGGGTAGAATCC AAGAGCTGCGAGAGGAGATTAGAAATAGGGAGGTTTTGGGCACTGAGAGGAGGCGTTACG AGTCCAGGGGTGAATCTCTGCTTACCAGTAAAAGATTTGATCAGTGTGGTGTCTCCGCGC TGACAGTCAAAGCACTTACTGATGCTGGATATGTACAGACAACTGTGGTTCAAGAGGCAG CTCTTCCTATATGTCTTGAAGGTAAAGATGTTCTTGTCAAGGCCAAAACTGGAACCGGCA AAAGTGCAGCTTTTCTGCTTCCTGCAATTGAATCAGTCTTGAATGCTATGAAGAGCAATA CAAATCAGCGAGTATCTCCAATATTTGCTCTTGTCCTATGCCCTACAAGAGAGCTTGCTA TTCAGCTTACAGCTGAAGCAAATGTCTTGTTAAAGTACCATGAAGGAATTGGTGTTCAAT CTCTTATTGGTGGCACTAGATTCAAGCTTGATCAGAGACGATTAGAATCTGATCCATGCC AGATTTTAGTTGCAACACCTGGTAGACTGCTGGATCACATTGAAAACAAATCATCATTCT CTGTTCGTTTGATGAGATTGAAATTGCTTGTGTTGGATGAAGCTGATCATTTGCTAGATC TGGGTTTCCGTAAAGACATAGAAAAGATTGTCGATACCTTGCCACGTCAAAGACAAACAT TGCTCTTCTCAGCTACTATTCCAAAAGAGGTTCGAAGAGTTTCACAGCTAGTATTAAAGA GGGATCACGTTTTTGTTGACACAGTGGGCCTTGGAGCTGTTGAAACCCCAACTAAGGTTC AGCAGTCATGTCTTGTGGTGCCACATGAGCTGCATTTTCATACGGTTCATCACCTGCTTC GAGAGCATATTGATCGTGAAGTTGATTACAAGGTTATTGTTTTCTGCACGACAGCCATGG TGACTGAGTTTATGTATATCATGCTTCGAGATTTGAAGTTAAATGTCAGGGAAATTCACT CGAGGAAACCTCAGCTCTATAGAACTCGCATATCTGAAGAGTTCCGGGGCTCTAACCGCA TAGTTCTCGTAACGTCAGATGTTTCTACTCGTGGGGTGAACTATCCAGATGTCACCCTTG TGATTCAGGTTGGTGTTCCTCCCGATAGAGAGCATTACATCCATCGGCTTGGAAGGACTG CAAGGGAAGGTAAATCTGGCAAGGGAATTCTTTTGCTTGCGCCATGGGAACAATACTTCT TGGACGAGATAGGCGATCTCCCGATTGACAAGTATCCAGCACCAGACATTGACCAGGAGA TGAAGCAAAAGGTTGACGATTCAATAGAGATGGTTGACATGAGCATCAAAGAAGCAGCAT ACCATGCGTGGCTGGGTTACTACAACTCCATCGCTGACATAGGTAGAGATAAAAGAATGG TTGTTGACCTAGCAAATCGATTTGGTGCCTCGATTGGCCTGGAGAAGCCTCCAGCGATAT ACCGGAAGACCGCTCTGAAGATGGGGCTCAAGGATGTCCCTGGGATTCGAATAAGGAAAT GACATGTTCCTCCACAGCAATAAGGGACCTTTTAGCCTCGACATTGGATTGGAGGACATG TAATTGAATTGGGTTCAAAATATACAAAATTACTCACCTCTGTTGCAATGGCCTAACTCC TTAAATGCATCTTCGATTTC