Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018489_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:5:221703580:221706657:-1 gene:Zm00001d018489 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tumor-related protein

Sequence

ATGGATCACGACAGATTGAATTTGCCGAGCACGTCGGCTATTTCGCTGGAGGTGATGGGC
CACCAGCTACATATTTCACAGGATCCAAACTCCAAGCACCATGGGACCACGGTCTGGGAT
GCATCAATGGTGTTTGTCAAGTTTTTGGAAAAGAATAGCAGAAAAGGTCGCTTTTGTCCG
TCCAAACTAAAAGGAAAGAGAGTGATTGAATTGGGAGCTGGCTGCGGTCTAGCTGGGTTC
GGAATGGCCTTGTTGGGTGGTGATGTTACAACAACTGACCAAGCCGAGGTGCTCCCACTG
CTTATGAGAAATGTTGAACGGAACAGATCTTGGATCTCACAATCGAACCCCGACTCAGAT
TCCGTTGGCTCAATTACAGTTGCAGAATTGGACTGGGGGAACAAAGAACATATCAAGGCC
GTTGAACCTCCATTTGATTACATTGTAGGAACTGACGTTGTTTATTCGGAGCATCTGTTG
CAACCTCTAATGGAGACGATTACTGCATTATCTGGTCCTAAAACAAAAATATTGCTAGGG
TACGAGATCCGTTCGACAACTGTCCATGAGAAGATGATGGAAATGTGGAAAAGCAATTTC
ATTGTGAAAACGGTCTCTAGATCGAAGATGGATGTGAAATATCAGCATCCTAGCATACAT
CTCTACATGATGGACCTGAAGGCACCATTGATCCCTGAGGTTGAGGCTGCCGACAATGGG
AACTACGAGGAAGAGGTTGAGGTTGCTGTGAATCAAGAGGAAGACGAAGATCCTGGAGTG
AAGAGCGAATCTTGTTCCGGCTCGTCACCAGAGGCTAAGAGCGGCAGTCTGGATGATTGG
GAAATCAGAAGGTGTGGGGCTATGGCTGCAAGGCTTCTGAAGGATGTGAAACTGTAA

Peptide Sequence

PEP ID

Zm00001d018489_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:5:221703580:221706657:-1 gene:Zm00001d018489 transcript:Zm00001d018489_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tumor-related protein

Sequence

MDHDRLNLPSTSAISLEVMGHQLHISQDPNSKHHGTTVWDASMVFVKFLEKNSRKGRFCP
SKLKGKRVIELGAGCGLAGFGMALLGGDVTTTDQAEVLPLLMRNVERNRSWISQSNPDSD
SVGSITVAELDWGNKEHIKAVEPPFDYIVGTDVVYSEHLLQPLMETITALSGPKTKILLG
YEIRSTTVHEKMMEMWKSNFIVKTVSRSKMDVKYQHPSIHLYMMDLKAPLIPEVEAADNG
NYEEEVEVAVNQEEDEDPGVKSESCSGSSPEAKSGSLDDWEIRRCGAMAARLLKDVKL

Transcript Sequence

Transcript ID

Zm00001d018489_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:221703580:221706657:-1 gene:Zm00001d018489 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tumor-related protein

Sequence

ATAGCAGTCGATGGCCCATCGAGTATAGCAGACGAAGTTGTAGTTGCTCTCCTCCGAGAA
CCCTCGCCGCCGCCACCCACCGGAGCTCCGGTTTGCAGTTCTTCGCTGAAGGCCATGGAT
CACGACAGATTGAATTTGCCGAGCACGTCGGCTATTTCGCTGGAGGTGATGGGCCACCAG
CTACATATTTCACAGGATCCAAACTCCAAGCACCATGGGACCACGGTCTGGGATGCATCA
ATGGTGTTTGTCAAGTTTTTGGAAAAGAATAGCAGAAAAGGTCGCTTTTGTCCGTCCAAA
CTAAAAGGAAAGAGAGTGATTGAATTGGGAGCTGGCTGCGGTCTAGCTGGGTTCGGAATG
GCCTTGTTGGGTGGTGATGTTACAACAACTGACCAAGCCGAGGTGCTCCCACTGCTTATG
AGAAATGTTGAACGGAACAGATCTTGGATCTCACAATCGAACCCCGACTCAGATTCCGTT
GGCTCAATTACAGTTGCAGAATTGGACTGGGGGAACAAAGAACATATCAAGGCCGTTGAA
CCTCCATTTGATTACATTGTAGGAACTGACGTTGTTTATTCGGAGCATCTGTTGCAACCT
CTAATGGAGACGATTACTGCATTATCTGGTCCTAAAACAAAAATATTGCTAGGGTACGAG
ATCCGTTCGACAACTGTCCATGAGAAGATGATGGAAATGTGGAAAAGCAATTTCATTGTG
AAAACGGTCTCTAGATCGAAGATGGATGTGAAATATCAGCATCCTAGCATACATCTCTAC
ATGATGGACCTGAAGGCACCATTGATCCCTGAGGTTGAGGCTGCCGACAATGGGAACTAC
GAGGAAGAGGTTGAGGTTGCTGTGAATCAAGAGGAAGACGAAGATCCTGGAGTGAAGAGC
GAATCTTGTTCCGGCTCGTCACCAGAGGCTAAGAGCGGCAGTCTGGATGATTGGGAAATC
AGAAGGTGTGGGGCTATGGCTGCAAGGCTTCTGAAGGATGTGAAACTGTAAACATGAATC
CTAGAGATCGTTTTCCCCCCTTGTCAGAGAACTCTAGAGCTCCTTTATGTTGTTGTCCTT
GATAGTTGTTGTACTGCCCATGGCAGTCTATGTTATTGTATCTTATTGCATCAGTGGATA
TTGATACCATT