Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018460_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:5:221196099:221205207:-1 gene:Zm00001d018460 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leunig-related2 description: leunig-related2
Sequence

ATGCAGATGCAGCAATTGCAACTTATGCATCAAAGACATGCTCAACTTCAGCGAACTAAC
GCGAATCATCCTTCACTTAATGGTCCAATAAATGCTTTAAATTCTGAGGGCATTTTGGGG
CCATCAACAGCTAGTGTCTTAGCTGCCAAGATGTATGAAGAGCGATTGAAGCACCCACAT
TCAATGGAGTCTGAGGGATCACAACTTATTGAAGCTAGTAGAATGGCTCTTCTCAAGTCA
GCAACAAACCATGCAGGGCAATTAGTTCCAGGGACTCCTGGAAATGTGTCTACAACTCTG
CAGCAAATCCAGGCACGGAATCAGCAAACGATTGATATTAAGAGTGAAGGTAACATGGGA
GTACCCCAGAGATCTTTACCCATGGATCCATCATCTTTATACGGTCAAGGATTAATTCAA
CCTAAACCTGGATTGAGCGGTGCAGGGCTGAACCAAGGTGTAAGCGGTTTACCACTGAAG
GGCTGGCCATTAACTGGAATTGACCAGTTAAGGCCGAATTTGGGTGCTCAAATGCAGAAG
CCATTTCTTTCAACACAGTCACAGTTCCAACTTATGTCCCCACAGCAGCAACAACAATAC
TTAGCACAGGCCCAAGCACAAGGGAACCTTGGAAACTCAACTAATTATGGGGATATTGAT
CCCCGCAGACTTACAGCATTGACCAGGGGTAGTTTGAATGGTAAAGATAGTCAGCCTGCA
GGAACGGATGGTTGTATTAGTTCCCCTATGCAATCCAGTTCACCCAAAGTCAGACCAGAC
CAAGAGTATCTCATGAAGATGCAGCAGACATCTTCCCAGCAACCCCAGGAACAGCTTCAG
CAGCAGCAGCAGAACCAACAGCAGCAACAGAGCCAACAACAAATGCAACAGAACAATAGA
AAAAGAAAGCAGCCTACTTCTTCAGGACCAGCAAATAGTACCGGTACAGGAAACACTGTG
GGTCCTGCAAACTCCCCACCATCTACACCATCCACACATACTCCTGGGGATGGACTTGGA
ATGGGTGGTAATATGCGCCACGTTCCAAAGAACTTAATGATTTATGGTGCGGATGGAACT
GGACTTGCCTCCTCTTCAAATCAAATGGATGACCTGGAGCAGTTTGGTGATGTGGGCTCT
TTGGACGATAATGTTGAATCCTTCTTATCCAATGATGATGGAGATCCCAGGGATATTTTT
GCTGCACTCAAAAGAAGTCCTGCAGAGCCTAGCCCAGCCGTTTCAAAAGGTTTTACTTTC
AGTGAAGTCAACTGTTGGCGCACAAGCAACAGCAAAATTGTTTGCTGCCACTTCTCTTCA
GATGGCAAGATTTTGGCTAGTGCAGGACATGAAAAGAAGGCTGTACTTTGGAACATGGAA
AATTTTCAGACACAGTATACACCAGAAGAGCATGCCCTTATTATCACTGATGTCCGTTTC
AGGCCTAACTCTAGTCAGCTGGCAACATCTTCTTTTGATAGAACTATTAAATTATGGAAT
GCTGCCGATCCTGGATTCTCTTTGCATACATTCACTGGGCACAACGGCCAGGTCACATCA
TTAGATTTTCATCCAAAGAAAACAGACCTTCTATGCTCTTGTGATGGCAGTGGTGAAATC
CGGTACTGGAATGTGACCCAGTTTGCATGCTTGCGTGCCATAAAGGGTGGTAGTGCCCAA
GTCCGGTTTCAGCCTCATGTTGGACAGTTTTTAGCCGCAGCTGCTGAAAACGTGGTTTCC
ATATTTGACATTGAGACACATGGGAAAAAATACACTCTACAGGGCCATAACACTGATGTG
CAGTCAGTGTGCTGGGACAACAATGGGGAATATATTGCATCTGTCAGTCAGGACCTAGTT
AAGGTTTGGTCAATGTCAACTGGGGATTGCATTTATGAGCTTAGTTCCAATGGAAACAAG
TTCCATTCTTGCGTGTTCCACCCGAGCTATTCCAATCTCTTGGTTATTGGAGGCTACCAG
TCTCTCGAGGTTTGGAACATGGTGAAAAACCAGAGCCTAACCGTACAAGCTCATGAAGGT
CTAATTGCGGCGCTGGCGCAGTCACCAGTCACAGGGATGATAGCTTCTGCTAGCCATGAC
AACTCTGTCAAGGTGTGGAAATAA

Peptide Sequence

PEP ID

Zm00001d018460_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:5:221196099:221205207:-1 gene:Zm00001d018460 transcript:Zm00001d018460_T010 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leunig-related2 description: leunig-related2
Sequence

MQMQQLQLMHQRHAQLQRTNANHPSLNGPINALNSEGILGPSTASVLAAKMYEERLKHPH
SMESEGSQLIEASRMALLKSATNHAGQLVPGTPGNVSTTLQQIQARNQQTIDIKSEGNMG
VPQRSLPMDPSSLYGQGLIQPKPGLSGAGLNQGVSGLPLKGWPLTGIDQLRPNLGAQMQK
PFLSTQSQFQLMSPQQQQQYLAQAQAQGNLGNSTNYGDIDPRRLTALTRGSLNGKDSQPA
GTDGCISSPMQSSSPKVRPDQEYLMKMQQTSSQQPQEQLQQQQQNQQQQQSQQQMQQNNR
KRKQPTSSGPANSTGTGNTVGPANSPPSTPSTHTPGDGLGMGGNMRHVPKNLMIYGADGT
GLASSSNQMDDLEQFGDVGSLDDNVESFLSNDDGDPRDIFAALKRSPAEPSPAVSKGFTF
SEVNCWRTSNSKIVCCHFSSDGKILASAGHEKKAVLWNMENFQTQYTPEEHALIITDVRF
RPNSSQLATSSFDRTIKLWNAADPGFSLHTFTGHNGQVTSLDFHPKKTDLLCSCDGSGEI
RYWNVTQFACLRAIKGGSAQVRFQPHVGQFLAAAAENVVSIFDIETHGKKYTLQGHNTDV
QSVCWDNNGEYIASVSQDLVKVWSMSTGDCIYELSSNGNKFHSCVFHPSYSNLLVIGGYQ
SLEVWNMVKNQSLTVQAHEGLIAALAQSPVTGMIASASHDNSVKVWK

Transcript Sequence

Transcript ID

Zm00001d018460_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:221196099:221205207:-1 gene:Zm00001d018460 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leunig-related2 description: leunig-related2
Sequence

CTCTTCTTGAGATTTTGATTTGATAGGTAATAACTGATGCAGTGTAGTTATCATCTGAAG
TGCGGATCTCATGTTCAGGGGCCACATGCATTGATCAACAAGCAATGCCAATATAATTTG
GCATATTGTTCAGATGTATGGTAGGACTAGAATGTCAGCAAATAGGGTAGAGTCCAGTTT
CGAAACTGTTATAAATATCCTTACAAAATGGTTATCGAAATAGTACCAATGTACCATTGC
CACATCAGTCAAAGATAGACTTCTTGCTTACGAAAGACAGGATATTCGAAAAGGGTAACT
GGTACAACTGCTGTTACATTAGAGGTTTAGAACCTTCATTCCTAGTATCTAAAAGATGCT
ATCTTGTAAAGATCTCAAACCGAGTAAGGAGCGAAGGACCGAGTATGAAACGATGATATA
TGTGATGGTCAGTTATGCTTTCAGGGAACATATCCTCCAGCCGATTGCAAATCAACATGC
CAAACATTGTATCTCCTTCTATGCTGATGATGTTGTTTTGTTCATGCGGCCCTCTCATCA
GGATATCTCAGCAATTATCAGCATTTTAGACATATTTGGTCATGCTACAGGGCTAAAAAC
GAACATCTCCAAAAGTTCTGTTACACCCATTCAATGTGGAGCGAATGAGCTGACCACCAT
TTCTGCCTTATTACCATGTGCTACAAAAATTTTTCCCTGCACTTACTTGGGGATTCCTCT
ATCAATCCGTAGGCTTGCTAACTCTGATCTCTTGCCACTTGTTGATAAAGTTGCTGATAA
ACTTCCAGGATGGAAAACCAATCTTCTCAGCTGGGCTGGTCGTCTTGTCATGGTTAAGAC
AGTGCTGTCTTCTGTCCCTATCTATCTTATGCTTGCATTAGAACTCCCTAAATGGGTTTT
TAAGGCAATCGATAAGAGGAGACGAGGCTTTCTTTGGAAGGGGCAAGGTGACGCAAATGG
AGGTAACTGCCTTGTGTCCTGGGAAGCTGTCCAGCGGCCTCTCAAGTATGGTGGTCTGGG
TATTCTCAACTTGGAGATGTTTGGATGGGCCTTACGTGCCAGGTGGCTTTGGTTACAGAA
GACTGACACGTCAAGGCCATGGGCTGGTCTCCCTATCCGAGTGCACCGTAATGCAAAGGC
CCTCGTTGATGTGGCTATTACCTCAGTGGTAGGCAGTGGTGAATCTGTGAAGTTCTGGTC
TGATAGTTGGCTCCTTGGTAAAACTGTGGTTGAACACTGTCCAACCCTGATCCAAATGAT
TTCTAGAAGGGCTTTAAAGCGAAGAACAGTAGCCGAGGGGCTCACAAATCGTCAATGGGT
GTCAGATATTCGGGGAGGATTGTCTGTAACGGTCCTAGTGGAGTATCTGCAGCTATGGAA
CTTGGTTGATGGGGTAGTTCTGCAACCTGACATCGCAGACCAACACATCTGGCGCCTCTC
TGCCCATGGTACTTATTGTAGCAAATCGGCCTATGATGCTCTCTTTGTTGGCTCTATCCC
TTTTGGCCCTTGGCGACGTGTCTAGAAGACCTGGGCCCCCTTAAGATGCAAATTCTTTGT
ATGGTTGGCAATCAAAAACAGGGTTTGGACAACTGATAGACTGGCAAAAAGAGGTTTGCC
CCATCCAGTTGCTTGCCCTCTGTATGATCAGGCCGAGGAAACCATCCAGCATATTCTTGT
CTCCTGCGTGTTCGCTCGGCAAATATGGACGTCCATACTACACAATTTAGGCCTCCTAGC
CATTGTACCTCAGCCTGGATGCACTCGTTTCTCAAATTGGTGGTGCCAAAGTATCAAGAA
AGTGGAGAAGAGTCTAAGGAAAGGTCTTAATTCCTTGATCATTTTGGTCGCTTGGGTGAT
TTGGAAGCACCGTAATGCTTGTGTTTTTGAGGGGGTTGTGCCCTGCACCCAGCGAGTTCA
GAGTGCTGTGATTGAGGAGGGCAGCGTTTGGTGTTTGGCTGGTGCATCAGCTCTGCAGGA
CCTCCTCCTCCTGCACCAGCTCCCTAGGGGACCCTAGCAATTTGCCTGTTGGTGGTCGTT
TTGGTCGGGTTGTTGTGTGCGTGGCGCGTTGTGTTATTGTGAGGGGGGTCTCGGCCTAGG
GGCCTCTGTATTAGGGGTTGACAAGTCCTGTCTCTCCTATGTTTTTTTCTTCTTAATATA
ATGATACACAACTCTCCTGCGTTTGTTAAAAAAAAGATATATGTGACGGATGCCTACCCA
TTCCAAGATCACATGCATTCATGTGATATTTTTGTAACTATTTCTCTCCATTAGTTTGTT
TGCCCAGGAATCCATCATAAGTGTGACTATGTTATGCTTGACTTGTGAATTGTGATGCAG
CAATTGATGCTCCTGGAGGGTTTCTGTTTGAGTGGTGGTCTGTCTTTTGGGATATATTCA
TCGCAAGGACAAATGAAAAGCATTCTGAAGTTGCAGCGGCATATCTAGAGGCACAGCAAA
TAAAAGCAAGAGAGCACCAGCAGCAGATGCAGATGCAGCAATTGCAACTTATGCATCAAA
GACATGCTCAACTTCAGCGAACTAACGCGAATCATCCTTCACTTAATGGTCCAATAAATG
CTTTAAATTCTGAGGGCATTTTGGGGCCATCAACAGCTAGTGTCTTAGCTGCCAAGATGT
ATGAAGAGCGATTGAAGCACCCACATTCAATGGAGTCTGAGGGATCACAACTTATTGAAG
CTAGTAGAATGGCTCTTCTCAAGTCAGCAACAAACCATGCAGGGCAATTAGTTCCAGGGA
CTCCTGGAAATGTGTCTACAACTCTGCAGCAAATCCAGGCACGGAATCAGCAAACGATTG
ATATTAAGAGTGAAGGTAACATGGGAGTACCCCAGAGATCTTTACCCATGGATCCATCAT
CTTTATACGGTCAAGGATTAATTCAACCTAAACCTGGATTGAGCGGTGCAGGGCTGAACC
AAGGTGTAAGCGGTTTACCACTGAAGGGCTGGCCATTAACTGGAATTGACCAGTTAAGGC
CGAATTTGGGTGCTCAAATGCAGAAGCCATTTCTTTCAACACAGTCACAGTTCCAACTTA
TGTCCCCACAGCAGCAACAACAATACTTAGCACAGGCCCAAGCACAAGGGAACCTTGGAA
ACTCAACTAATTATGGGGATATTGATCCCCGCAGACTTACAGCATTGACCAGGGGTAGTT
TGAATGGTAAAGATAGTCAGCCTGCAGGAACGGATGGTTGTATTAGTTCCCCTATGCAAT
CCAGTTCACCCAAAGTCAGACCAGACCAAGAGTATCTCATGAAGATGCAGCAGACATCTT
CCCAGCAACCCCAGGAACAGCTTCAGCAGCAGCAGCAGAACCAACAGCAGCAACAGAGCC
AACAACAAATGCAACAGAACAATAGAAAAAGAAAGCAGCCTACTTCTTCAGGACCAGCAA
ATAGTACCGGTACAGGAAACACTGTGGGTCCTGCAAACTCCCCACCATCTACACCATCCA
CACATACTCCTGGGGATGGACTTGGAATGGGTGGTAATATGCGCCACGTTCCAAAGAACT
TAATGATTTATGGTGCGGATGGAACTGGACTTGCCTCCTCTTCAAATCAAATGGATGACC
TGGAGCAGTTTGGTGATGTGGGCTCTTTGGACGATAATGTTGAATCCTTCTTATCCAATG
ATGATGGAGATCCCAGGGATATTTTTGCTGCACTCAAAAGAAGTCCTGCAGAGCCTAGCC
CAGCCGTTTCAAAAGGTTTTACTTTCAGTGAAGTCAACTGTTGGCGCACAAGCAACAGCA
AAATTGTTTGCTGCCACTTCTCTTCAGATGGCAAGATTTTGGCTAGTGCAGGACATGAAA
AGAAGGCTGTACTTTGGAACATGGAAAATTTTCAGACACAGTATACACCAGAAGAGCATG
CCCTTATTATCACTGATGTCCGTTTCAGGCCTAACTCTAGTCAGCTGGCAACATCTTCTT
TTGATAGAACTATTAAATTATGGAATGCTGCCGATCCTGGATTCTCTTTGCATACATTCA
CTGGGCACAACGGCCAGGTCACATCATTAGATTTTCATCCAAAGAAAACAGACCTTCTAT
GCTCTTGTGATGGCAGTGGTGAAATCCGGTACTGGAATGTGACCCAGTTTGCATGCTTGC
GTGCCATAAAGGGTGGTAGTGCCCAAGTCCGGTTTCAGCCTCATGTTGGACAGTTTTTAG
CCGCAGCTGCTGAAAACGTGGTTTCCATATTTGACATTGAGACACATGGGAAAAAATACA
CTCTACAGGGCCATAACACTGATGTGCAGTCAGTGTGCTGGGACAACAATGGGGAATATA
TTGCATCTGTCAGTCAGGACCTAGTTAAGGTTTGGTCAATGTCAACTGGGGATTGCATTT
ATGAGCTTAGTTCCAATGGAAACAAGTTCCATTCTTGCGTGTTCCACCCGAGCTATTCCA
ATCTCTTGGTTATTGGAGGCTACCAGTCTCTCGAGGTTTGGAACATGGTGAAAAACCAGA
GCCTAACCGTACAAGCTCATGAAGGTCTAATTGCGGCGCTGGCGCAGTCACCAGTCACAG
GGATGATAGCTTCTGCTAGCCATGACAACTCTGTCAAGGTGTGGAAATAACAGTAACAAC
GATTATGATGCATCTAGGTAGTTTTTTTTCCAGGGCAAGTGAAATTTCTCCTGCTGAGGC
ATAAAATAAGGAAGAGTAGTAAATTAGATGGTTGCCGGTCGCGGTTCAGCTGTCCAAGAG
CAGTGAGTTTGTTGATGGGTTGTATTGTATTTATGCTGATAGGCTGTTTGTGTAGCTCAG
AAACAAAAAAGAATACATTGGCTGAAAAGGTGTCCGCCTGTTTTATTTTTTGTTTCTGCC
GTATCATATGTAACCATTTAACGTTCCCTGTTTTTTAATTGGAACTCGCTGCGATTGGCA
TCT