Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018428_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:5:220579161:220583564:-1 gene:Zm00001d018428 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger (C3HC4-type RING finger) family protein
Sequence	ATGGAGAGCAGATGGCGGAGGGCCAAGATGTCGCTGGGGCTCAACCTCTGCGTCTACGTG CCCCGGACGCTGGAAGGCGACGACGCCGCCTCGCCCAGCACCGCCTCCTCCACGGCGGCG CTCGTGTCGCCGGTGGCCTCCTCCTCGTCCGCCGCGACGAGCACCGACACCACCCCCACG GCTGCCGCGAGCAACGGCAAGGCCAACGGCGCCGCCGCCGCCGCCGCCGCGCTCATGCCC ACCACCCCGACGCCGACGTCCGCCGGGCTCCGCCTCTCCAAATCCGGCAGCAAATCCTTC AAGAAAACATGTGCTATATGCTTGACCACAATGAAGCCTGGTCAGGGCCACGCTCTCTTC ACAGCAGAGTGCTCGCACACCTTCCACTTCCACTGTATTTCAGCAAACGTTAAGCACGGG AGCAGCAGCTGCCCGGTATGCCGTATCAAATGGAAGGAGCTCCCGTTCCGAGGTCCCTTG CCTGCTGAATTGCCCCAAGGAAATGCGAGGATCAATCCAGTTCATGGGTACCAGAATGGG GGCCATATGACCATACCGCGGCCACTTCCACTTCCTCGCGCACGCTCTTTTGGCCGGCTT CATCATCTGGCCACGCTGCTGCCTGACGCTGACCCTGGCACTTTCAACGACGACGAACCC TTGGATTTGTCGTGCGAAGAGGCTAACGGCACTCAGCAGGGCTGTTTGAGAACGGTAGAG ATAAAAGCATATCCAGAGTTCACCCAAGTGCCTGAAAATACATCAGAAAGAAACTTCACT GTTCTAGTTCACCTCAAGGCACCGCCTGCTCAGCACCTTCTGCAGTCATCCAGCGATCTC GGCGACGGCAACGGAGTAAGCACGACTCGTGCCCCTGTTGATCTCATCACGGTTCTTGAT GTCAGTGGAAGTATGGCTGGTACCAAGCTCGCGTTGTTGAAGAGGGCTATGGGGTTTGTC ATCCAGAACCTTGGGTCCTCTGACCGGCTCTCCGTCATCGCCTTCTCGTCGTCCGCACGC AGGCTCTTCCCGCTCCGTAGGATGACCGAGTCTGGCCGGCAGCAGAGCTTGCTGGCTGTT AACTCACTGACGGCAAACGGAGGGACCAATATCGCAGAGGGCCTCAGGAAGGGCTCCAAG GTGATCGAAGAGCGTCAGTCGAAGAATCCAGTGTGCAGCATCATCCTTCTATCAGATGGC CAGGACACTTACACGGTCTCGCCGACCGCTGGTGTACACAAAGGAGCGACAGAGTATTGC GCGCTCTTGCCATCCACGACCACGAATGGCAGCCAGCAGGTGCCCGTTCACGTCTTCGGA TTCGGCGCCGACCATGACTCGGTCTCGCTGCACTCCATCTCGCAGACTTCTGGCGGGACC TTCTCGTTCATCGAGACAGAGGCCACCATCCAAGACGCGTTCGCGCAGTGCATTGGCGGG CTTCTGAGCGTGGTCGCGCAGGGTCTGCATGTGAAGGTCGAGAGCCTCCACCCTGACGTG CACTTCGGCTCCATCAGGTCAGGCAGCTACTCTAGCAGAGTCTCGGATGACAGCAGGAAT GGCTCCGTGGACGTTGGGGACCTGTACGCTGAGGAGGAGCGGGATTTTCTCGTGTCTGTG AACGTTCCGCCAGGCTGTGGCGAGACGGCGCTCCTCAAGGTTGGCTGCGTCTACAAGGAC CCGCTGATGAAGGAGACGGTGAACATGTCCGGCGTGCAGGTGAAGATCTCCAGGCCAGCG TTCGTCTCGGCGCAGAGCGTGTCGGTCGAGGTGGACCGCCAGAAGAACCGTCTCCACGCC GCCGAGGTGATGGCCGAGGCGAGGTTGTCCGCGGAGCGCGGTGACCTGGCCAACGCGGTC TCGCTGCTCGAGGACTGCCGGAGGATGATCACGGGGTCGGCGTCGGGACAGTCCGGTGAC CGTCTGTGCCAGGCGCTGGACGCGGAGCTGAAGGAGATGCAGGACCGGATGGCCAGCCGG CAGAGGTACGAGGCGTCCGGCCGGGCGTATGTGCTCTCGGGCCTGAGCTCCCACTCGTGG CAGCGGGCGACCGCGCGCGGAGACTCGACGGACAGCGCGAGCCTGGTCCAGGCCTACCAG ACCTCGTCCATGGTGGACATGCTGCTGCGCTCGCAGACGATGAGCCGCCCGTCGACCCCT CGACCAGCTCCGCAGATCAGGCACGCGAAGTCGTTCCCCGCACGCCCGCAGCCAAGGTAA

Peptide Sequence

PEP ID	Zm00001d018428_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:5:220579161:220583564:-1 gene:Zm00001d018428 transcript:Zm00001d018428_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger (C3HC4-type RING finger) family protein
Sequence	MESRWRRAKMSLGLNLCVYVPRTLEGDDAASPSTASSTAALVSPVASSSSAATSTDTTPT AAASNGKANGAAAAAAALMPTTPTPTSAGLRLSKSGSKSFKKTCAICLTTMKPGQGHALF TAECSHTFHFHCISANVKHGSSSCPVCRIKWKELPFRGPLPAELPQGNARINPVHGYQNG GHMTIPRPLPLPRARSFGRLHHLATLLPDADPGTFNDDEPLDLSCEEANGTQQGCLRTVE IKAYPEFTQVPENTSERNFTVLVHLKAPPAQHLLQSSSDLGDGNGVSTTRAPVDLITVLD VSGSMAGTKLALLKRAMGFVIQNLGSSDRLSVIAFSSSARRLFPLRRMTESGRQQSLLAV NSLTANGGTNIAEGLRKGSKVIEERQSKNPVCSIILLSDGQDTYTVSPTAGVHKGATEYC ALLPSTTTNGSQQVPVHVFGFGADHDSVSLHSISQTSGGTFSFIETEATIQDAFAQCIGG LLSVVAQGLHVKVESLHPDVHFGSIRSGSYSSRVSDDSRNGSVDVGDLYAEEERDFLVSV NVPPGCGETALLKVGCVYKDPLMKETVNMSGVQVKISRPAFVSAQSVSVEVDRQKNRLHA AEVMAEARLSAERGDLANAVSLLEDCRRMITGSASGQSGDRLCQALDAELKEMQDRMASR QRYEASGRAYVLSGLSSHSWQRATARGDSTDSASLVQAYQTSSMVDMLLRSQTMSRPSTP RPAPQIRHAKSFPARPQPR

Transcript Sequence

Transcript ID	Zm00001d018428_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:220579161:220583564:-1 gene:Zm00001d018428 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger (C3HC4-type RING finger) family protein
Sequence	ATACGCCTCTCTCCCTTTCTCTTCCCTCTTTTCTTTAACCTCCCTTTCTTGATTTTCCAA GCTGCTCGCATGGCCATGGCCTCCGCGGCGGCGCCTCCTCCTCCTCCTCCTGCCAGCCAC CAGACCGGGCAAAAGCGCCGCCAAATCTGCCTCTGACCTCTCCACCAAATACCCAACCAG CACCCGACAACCCGCCACCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT CTCACAAACACAAGAAGCTTGCTCAGCTTAGTCAGCTCAGCGCCTCAGCCTCGTCTTAAA GCTAGCACCAGTAGGCGACGCTGGGTGGGAGCCGAGCTGCGAGCCTGCGACTGCGAGGGC ATAATGGAGAGCAGATGGCGGAGGGCCAAGATGTCGCTGGGGCTCAACCTCTGCGTCTAC GTGCCCCGGACGCTGGAAGGCGACGACGCCGCCTCGCCCAGCACCGCCTCCTCCACGGCG GCGCTCGTGTCGCCGGTGGCCTCCTCCTCGTCCGCCGCGACGAGCACCGACACCACCCCC ACGGCTGCCGCGAGCAACGGCAAGGCCAACGGCGCCGCCGCCGCCGCCGCCGCGCTCATG CCCACCACCCCGACGCCGACGTCCGCCGGGCTCCGCCTCTCCAAATCCGGCAGCAAATCC TTCAAGAAAACATGTGCTATATGCTTGACCACAATGAAGCCTGGTCAGGGCCACGCTCTC TTCACAGCAGAGTGCTCGCACACCTTCCACTTCCACTGTATTTCAGCAAACGTTAAGCAC GGGAGCAGCAGCTGCCCGGTATGCCGTATCAAATGGAAGGAGCTCCCGTTCCGAGGTCCC TTGCCTGCTGAATTGCCCCAAGGAAATGCGAGGATCAATCCAGTTCATGGGTACCAGAAT GGGGGCCATATGACCATACCGCGGCCACTTCCACTTCCTCGCGCACGCTCTTTTGGCCGG CTTCATCATCTGGCCACGCTGCTGCCTGACGCTGACCCTGGCACTTTCAACGACGACGAA CCCTTGGATTTGTCGTGCGAAGAGGCTAACGGCACTCAGCAGGGCTGTTTGAGAACGGTA GAGATAAAAGCATATCCAGAGTTCACCCAAGTGCCTGAAAATACATCAGAAAGAAACTTC ACTGTTCTAGTTCACCTCAAGGCACCGCCTGCTCAGCACCTTCTGCAGTCATCCAGCGAT CTCGGCGACGGCAACGGAGTAAGCACGACTCGTGCCCCTGTTGATCTCATCACGGTTCTT GATGTCAGTGGAAGTATGGCTGGTACCAAGCTCGCGTTGTTGAAGAGGGCTATGGGGTTT GTCATCCAGAACCTTGGGTCCTCTGACCGGCTCTCCGTCATCGCCTTCTCGTCGTCCGCA CGCAGGCTCTTCCCGCTCCGTAGGATGACCGAGTCTGGCCGGCAGCAGAGCTTGCTGGCT GTTAACTCACTGACGGCAAACGGAGGGACCAATATCGCAGAGGGCCTCAGGAAGGGCTCC AAGGTGATCGAAGAGCGTCAGTCGAAGAATCCAGTGTGCAGCATCATCCTTCTATCAGAT GGCCAGGACACTTACACGGTCTCGCCGACCGCTGGTGTACACAAAGGAGCGACAGAGTAT TGCGCGCTCTTGCCATCCACGACCACGAATGGCAGCCAGCAGGTGCCCGTTCACGTCTTC GGATTCGGCGCCGACCATGACTCGGTCTCGCTGCACTCCATCTCGCAGACTTCTGGCGGG ACCTTCTCGTTCATCGAGACAGAGGCCACCATCCAAGACGCGTTCGCGCAGTGCATTGGC GGGCTTCTGAGCGTGGTCGCGCAGGGTCTGCATGTGAAGGTCGAGAGCCTCCACCCTGAC GTGCACTTCGGCTCCATCAGGTCAGGCAGCTACTCTAGCAGAGTCTCGGATGACAGCAGG AATGGCTCCGTGGACGTTGGGGACCTGTACGCTGAGGAGGAGCGGGATTTTCTCGTGTCT GTGAACGTTCCGCCAGGCTGTGGCGAGACGGCGCTCCTCAAGGTTGGCTGCGTCTACAAG GACCCGCTGATGAAGGAGACGGTGAACATGTCCGGCGTGCAGGTGAAGATCTCCAGGCCA GCGTTCGTCTCGGCGCAGAGCGTGTCGGTCGAGGTGGACCGCCAGAAGAACCGTCTCCAC GCCGCCGAGGTGATGGCCGAGGCGAGGTTGTCCGCGGAGCGCGGTGACCTGGCCAACGCG GTCTCGCTGCTCGAGGACTGCCGGAGGATGATCACGGGGTCGGCGTCGGGACAGTCCGGT GACCGTCTGTGCCAGGCGCTGGACGCGGAGCTGAAGGAGATGCAGGACCGGATGGCCAGC CGGCAGAGGTACGAGGCGTCCGGCCGGGCGTATGTGCTCTCGGGCCTGAGCTCCCACTCG TGGCAGCGGGCGACCGCGCGCGGAGACTCGACGGACAGCGCGAGCCTGGTCCAGGCCTAC CAGACCTCGTCCATGGTGGACATGCTGCTGCGCTCGCAGACGATGAGCCGCCCGTCGACC CCTCGACCAGCTCCGCAGATCAGGCACGCGAAGTCGTTCCCCGCACGCCCGCAGCCAAGG TAAACTGCATGCAGCTGGGTGTTGCCGCCGAGAAGGATTTTTGTGGCGGGAGGACGGCAC CAGGGTATAGTTTGTGTGGGTATAAGAGGGGATGTAGGTGTAAATTTGGTGTGGGGTGGT GGAGGTAAATGGTGAGAGGTATGATATTTTATAATTGGGGGTAGGGGGGCTGGTATACGT CCTGGGGGAACTGGGCAGGATGGTGGCCTATTTATTTTTGTTTTGTTTTTTAATATTTGG TGGTGACTTGGTATACTCTAGTATTGTACTAGCTCCTTTGTGTGGTGATGTACATAAGGG AAGGGTATACACTTGGACTCTTTGAGGAGGGATGGATACCTGATCCTGGTCCTTGTCCTT GCAAGGTTTGTTTCCTCAACCTAGAAATGGAAGAAATGGAAAAAGGTTTGCTGCCTTTTA CTGCAAATGGAATTAATGATGATCTTGGGTGCGTTTTCTTGT