Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d018392_T015
CDS Infomation	cds chromosome:B73_RefGen_v4:5:219939478:219947212:1 gene:Zm00001d018392 gene_biotype:protein_coding transcript_biotype:protein_coding description:neurochondrin family protein
Sequence	ATGCGGCTCGCCGTCACCGTGCTCGCAGGGCTCGCGCGCGTCCCGGAGGTTGCGGCCGAC GAGGGTGTCGTTTCCACCGTGCCCCTAGTCGCCGAGGTTGTCGCCAAATCGACTGATCCA GCAATCACTGAAGAATGCTTTGAACTTCTGTCACTTATTGCAATAGCGTCTGAAGATGGG GCATATGAGTTTTGTGAGCCCGGTGTAATAGACATGATCTTCCTTCAAATCTTAAGCTTA ACAGATGGTTCTAAGTGCGTAGAACTTGCCATTAACCTACTGCAGTTACTAGTTCATAAA CTCAAAGTTGACACTATGAGTTCGGAGAAACTGCAAGGAATGACTAGAATGGTAACTTGT CTTGCCAGGATATTTGCTGTTCTCCACACTGCAGTTAAATTTGATGCCTTGCACATGCTT ACCTTCCTCCTGTCCCAAAAAGAATCTGGAGAGGGCCTTTTCTGCTCCCCACCCATGGCA CAAAACAGCCAGAGCACTTCATGCGCGGAGTGGGCAGTAGCAGTGGTGTTTGGCAGCACT CTGCCCAAATCTCATGGAGCAGAGTGCTTCCAAATTGGCGTATCCTCTGAAAAGTTGCAC GCTCTTCTTTTGGCGGAGTGCATGATGTCCATACTGGGCGAGGATTGGTTGTCAGAAGAT TTTGAAGTCCAGGATAACCAAAATGTGTTGTCTGTTGACAAATTTGTATTGCTTGTGCTG GAATCCGCAAGGGTTGAAGTGGCAGTCTTGCTAAATGAGCTTGCTTATCTGAAGTACGAG TCATCAAAAATTTCTCAGACAGATGAAGCCATCAGTCAGAAACAGAGGAACCTGGCTATA CTATTTTCGTTAATAGAAAGAATAATTAAAATGATATCAAATGCCAGTAGTGGTGAAGGT GCACCAATTCATACCATCCGTGAAAGTACCATAATGCAGGCCATTACGGGATTAAATGAG ACAATCAATTTAGTCTTAGACTTTCTGCAGGACGCGAAGGATCATGGTCAATGGAAAGGT GACGATCTTTTAGCAGCTGCAAGAATAGTAGGAAGTTATCTGGCAGAAGCACCATATGCC TGCAAGGAGAAGACTGGGAATCTATTGGAATTTATCTTTTCTATAGAAGGTCAAGATGAA TCAAGTTCCTTCTATTCTATTTGCTTCATGCTTCCAATGCTATCCCAAATAACAATGGAG GTTGATGGATGTAGAACTTTGGCATCATTTGGTGGCCATAAGGCAGTTATAGATTGCCTT GTTAAAATGACTGAGCAGGGTGGAATGACGATTGATAACGGTAGCATGTTTTTGGCATGT GATACCATCATAAATTTCATGTCTAATATGAAGAGTGTCCATATTCCAGTGGATTATTGT TTCATTCGCCTCCTAAAAGCACTTGTTACATGGGCTGGAACCACAGATGCCTCATCAGTT ACCATGACAGCATCCTGCTTATGTGTAATGCTGTTGGACATGACGTCAGAAAAGTTTCTA TTGAGCTGCTCTCATTTTGACGCCAATATCCTTGGGAGTTTGTCTGAGATCATCATCAGA AGTTTGCAGCAGGATATCCCTGATGATGATAGTGAGCAATTCAAGCAGAAGCAGATCATT GTATCAGGTTATAAGCGATGGGCTGATCGATTTCCACGTGTTAAAGATGTTGTGGAGCAG CATGTATCCGTGTGA

Peptide Sequence

PEP ID	Zm00001d018392_P015
PEP Infomation	pep chromosome:B73_RefGen_v4:5:219939478:219947212:1 gene:Zm00001d018392 transcript:Zm00001d018392_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:neurochondrin family protein
Sequence	MRLAVTVLAGLARVPEVAADEGVVSTVPLVAEVVAKSTDPAITEECFELLSLIAIASEDG AYEFCEPGVIDMIFLQILSLTDGSKCVELAINLLQLLVHKLKVDTMSSEKLQGMTRMVTC LARIFAVLHTAVKFDALHMLTFLLSQKESGEGLFCSPPMAQNSQSTSCAEWAVAVVFGST LPKSHGAECFQIGVSSEKLHALLLAECMMSILGEDWLSEDFEVQDNQNVLSVDKFVLLVL ESARVEVAVLLNELAYLKYESSKISQTDEAISQKQRNLAILFSLIERIIKMISNASSGEG APIHTIRESTIMQAITGLNETINLVLDFLQDAKDHGQWKGDDLLAAARIVGSYLAEAPYA CKEKTGNLLEFIFSIEGQDESSSFYSICFMLPMLSQITMEVDGCRTLASFGGHKAVIDCL VKMTEQGGMTIDNGSMFLACDTIINFMSNMKSVHIPVDYCFIRLLKALVTWAGTTDASSV TMTASCLCVMLLDMTSEKFLLSCSHFDANILGSLSEIIIRSLQQDIPDDDSEQFKQKQII VSGYKRWADRFPRVKDVVEQHVSV

Transcript Sequence

Transcript ID	Zm00001d018392_T015
Transcript Infomation	cdna chromosome:B73_RefGen_v4:5:219939478:219947212:1 gene:Zm00001d018392 gene_biotype:protein_coding transcript_biotype:protein_coding description:neurochondrin family protein
Sequence	TCGCTCCCTGAACCCTAACTTCCCCTTCCCTCCGCCACTCCTCTCACGGTCTCACCTGTT GCGTCCCCAATCCCCTGCAGGATTCGTCCTCGGCCACCGCCGCTACCGTTGCGCCGGTGG TGACCTCGGCCCCGCCGCTCGAAGACTGCCTCCGCCTCCTCCGCGGCGAGCGCGACGAGC AGAAGCTGGCGGGCCTGCTAGTCGCCGCCAACGTCTGCCGCGCGGGCGACGCCGACGCCG TCGCCAACGTCTACCGCGCCGTCGGGCCCCGCTTCCTCCGACGCCTCCTCAACACTGGTA AGAGACACGCCTGGAAGCGCGCCTCGTGGTAGTGGGGGGGGGGGGGGGGGGGCGGTGGTT CATCGATTTCTGCTTCGTGGGCGCAGGGTTGGGGAAAGTGGAGGGCGGGAAGGAGGAGGA GCGAGAGGCATACATGCGGCTCGCCGTCACCGTGCTCGCAGGGCTCGCGCGCGTCCCGGA GGTTGCGGCCGACGAGGGTGTCGTTTCCACCGTGCCCCTAGTCGCCGAGGTTGTCGCCAA ATCGACTGATCCAGCAATCACTGAAGAATGCTTTGAACTTCTGTCACTTATTGCAATAGC GTCTGAAGATGGGGCATATGAGTTTTGTGAGCCCGGTGTAATAGACATGATCTTCCTTCA AATCTTAAGCTTAACAGATGGTTCTAAGTGCGTAGAACTTGCCATTAACCTACTGCAGTT ACTAGTTCATAAACTCAAAGTTGACACTATGAGTTCGGAGAAACTGCAAGGAATGACTAG AATGGTAACTTGTCTTGCCAGGATATTTGCTGTTCTCCACACTGCAGTTAAATTTGATGC CTTGCACATGCTTACCTTCCTCCTGTCCCAAAAAGAATCTGGAGAGGGCCTTTTCTGCTC CCCACCCATGGCACAAAACAGCCAGAGCACTTCATGCGCGGAGTGGGCAGTAGCAGTGGT GTTTGGCAGCACTCTGCCCAAATCTCATGGAGCAGAGTGCTTCCAAATTGGCGTATCCTC TGAAAAGTTGCACGCTCTTCTTTTGGCGGAGTGCATGATGTCCATACTGGGCGAGGATTG GTTGTCAGAAGATTTTGAAGTCCAGGATAACCAAAATGTGTTGTCTGTTGACAAATTTGT ATTGCTTGTGCTGGAATCCGCAAGGGTTGAAGTGGCAGTCTTGCTAAATGAGCTTGCTTA TCTGAAGTACGAGTCATCAAAAATTTCTCAGACAGATGAAGCCATCAGTCAGAAACAGAG GAACCTGGCTATACTATTTTCGTTAATAGAAAGAATAATTAAAATGATATCAAATGCCAG TAGTGGTGAAGGTGCACCAATTCATACCATCCGTGAAAGTACCATAATGCAGGCCATTAC GGGATTAAATGAGACAATCAATTTAGTCTTAGACTTTCTGCAGGACGCGAAGGATCATGG TCAATGGAAAGGTGACGATCTTTTAGCAGCTGCAAGAATAGTAGGAAGTTATCTGGCAGA AGCACCATATGCCTGCAAGGAGAAGACTGGGAATCTATTGGAATTTATCTTTTCTATAGA AGGTCAAGATGAATCAAGTTCCTTCTATTCTATTTGCTTCATGCTTCCAATGCTATCCCA AATAACAATGGAGGTTGATGGATGTAGAACTTTGGCATCATTTGGTGGCCATAAGGCAGT TATAGATTGCCTTGTTAAAATGACTGAGCAGGGTGGAATGACGATTGATAACGGTAGCAT GTTTTTGGCATGTGATACCATCATAAATTTCATGTCTAATATGAAGAGTGTCCATATTCC AGTGGATTATTGTTTCATTCGCCTCCTAAAAGCACTTGTTACATGGGCTGGAACCACAGA TGCCTCATCAGTTACCATGACAGCATCCTGCTTATGTGTAATGCTGTTGGACATGACGTC AGAAAAGTTTCTATTGAGCTGCTCTCATTTTGACGCCAATATCCTTGGGAGTTTGTCTGA GATCATCATCAGAAGTTTGCAGCAGGATATCCCTGATGATGATAGTGAGCAATTCAAGCA GAAGCAGATCATTGTATCAGGTTATAAGCGATGGGCTGATCGATTTCCACGTGTTAAAGA TGTTGTGGAGCAGCATGTATCCGTGTGAATGTGATCAACCCCCAGGAGCTGTTCTCTATG AATGCAAACCTGCAAACGTGACAGTGCAGCTTTGACAATGCCTCGGTTCTGGTGGTTCAT TCCTTTTACCTGGTACTTCCCTGCGACCTGTTTCTGATGCGATTTTGGTTAGCGGACCTT GGCTTATGGGAATTCTGCAATGGGGAATGTTAGGTTAGCGAAATTCTCCAGCGGCAGGCC GGCAGCTAACGAGGTGCACCAACGTGGATCAGAAAGATGTCGTTGTTTATCCGGGAAATT CTCAGCTGCGAAGCAAATCTGACATTGTAATGTTTATGCTGCACGAGAAAGAACAAGGCG GTTTGGGGACTAGATTCTCATCTCGCTTTCACCATTTCTGAACGCATGTGTAACAGAACC AAGCCCAAGTTTCAGGCAAGGGGTTTTCATTTATATTGTTTAGCATGTATACATGCGAGA CGAACATATGAAAGGATAAACTCCTACTTAAATGTAAGTAGAGATATTGTAGTGGAGTAA AAAGCACACGTCTAGATTTGAGATGGCTCCTAAATCTTAAAAAGTGAGTCTGAACTAATG GAATGTTGTTTGGGATAGCTCCTAAACCTTAACAAATG