Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d018389_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:5:219814555:219816540:-1 gene:Zm00001d018389 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane 9 superfamily protein member 2

Sequence

ATGGCTCGCCCCGGCGCGCTCCTCCTCGCCGTCGCGGTGGCCGCGCTGCTCGCGGCCGCA
GTGCCGGGCGCCCGCGGATTCTACCTCCCGGGGAGCTACCCGCACAAGTACAACGTCGGG
GACGACCTCAACGTGAAGGTGAACTCCCTCACCTCCATCGACACCGAGATGCCCTTCAGC
TACTACAGCCTCCCCTTTTGCGAGCCACAAGACGGTGTCAAGGACAGCGCCGAGAACCTC
GGCGAGCTCCTCATGGGCGACCGCATCGAGAACTCGCCCTACCGCTTCCGCATGTACACC
AACGAGTCAGACGTCTTCCTCTGCCGCTCCCCACCGCTGGGCGCCGACGCCTTCTCTCTC
CTCAAGAAGCGCATCGACGAGATGTACCAGGTCAACCTCATCCTAGACAACCTCCCCGCC
ATCCGCTACACCAGGAAGGACGACTACATCATGCGCTGGACGGGGTACCCCGTCGGGATC
CGCGTCGGCGTCGACTACTACGTCTTCAACCACCTCCAGTTCACCGTCCTCGTCCACAAG
TACGAGGATGCCAATGTCGCGCGCGTCATAGGCGCCGCCGACGCCACCGACGCCATCCCC
TCCGGGGCTAAGGATGCCGCCTCCTCCTCCCCTGGATGGATGGTGGTCGGGTTCGAGGTT
GTGCCCTGCAGTATCAAGCACAACCCAGAGGACGTCAAGTCGCGCAAGATGTACGACAGC
TACCCCAGCAAGATCAAGTGCGACCCGACCACCGTGTCCATGAGCATCAAGGAGAACGAG
CCTATTGTCTACACCTATGAGGTGAACTTCGTGGAAAGCGACATCAAGTGGCCCTCCAGG
TGGGATGCCTACCTCAAGATGGAGGGGGCCAAGGTGCACTGGTTCTCCATTCTCAACTCC
CTCATGGTGATTGCCTTCCTTGCTGGTATTGTCTTTGTCATTTTGCTGAGGACCGTGAGG
CGTGATCTCACCAAGTACGAGGAGCTTGACAGTGAAGCGCAGGCCCAGATGAATGAGGAG
CTGTCCGGATGGAAGCTTGTGGTCAGTGATGTGTTCCGTGCGCCAAGCAACCCGATGCTG
CTTTGTATCATGGTTGGGGACGGTGTTCAGATCCTTGGGATGGCGGTTGTGACCATTCTC
TTTGCTGCGCTCGGGTTCATGTCCCCAGCCTCCCGTGGTACTCTGATCACGGGCATGCTG
TTCTTCTATCTGGTCCTTGGAATCCTGGCTGGATATGTTGGTGTTCGCGTATGGAAGACG
ATCAAGTGTGGGGATCACTCTGGGTGGGTCGCTGTGTCGTGGCGGGTGGCTTGCTTCTTC
CCCGGCATTGCATTCCTGATCCTGACCACACTCAACTTCCTATTGTGGGGAAGCCACAGC
ACTGGTGCCATCCCTTTCTCATTGTTCGTTGTGCTGCTTCTGCTCTGGTTCTGCATCTCC
GTGCCGCTCACGCTTGTTGGCGGGTTCCTTGGTGCCAAGGCTCCACATATTGAGTACCCT
GTCCGCACGAACCAGATCCCTCGTGAAATCCCTCCTCAGAAGTACCCATCCTGGTTGTTG
GTTCTTGGTGCTGGCACACTGCCCTTCGGCACCCTATTCATCGAGCTCTTCTTCATCATG
TCAAGCATATGGATGGGTCGTGTGTACTATGTCTTTGGGTTCCTCTTCGTCGTCTTGCTG
CTCCTGGTTATTGTCTGTGCTGAAGTTTCCCTGGTTCTAACTTACATGCACCTGTGTGTT
GAGGATTGGAAGTGGTGGTGGAAGTCATTCTTCTCATCTGGATCGGTGGCAATCTACATT
TTCTTGTACTCCATCAACTATCTTATTTTTGACCTCAAAAGCCTGAGTGGGCCAGTGTCT
GCTACCCTCTACATCGGTTACTCACTCTTCATGGTGATTGCTATCATGCTGGCAACTGGC
ACAGTTGGGTTTATTTCTTCATTCTGCTTCGTCCACTATCTTTTCTCATCGGTGAAAGCA
GATTAA

Peptide Sequence

PEP ID

Zm00001d018389_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:5:219814555:219816540:-1 gene:Zm00001d018389 transcript:Zm00001d018389_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane 9 superfamily protein member 2

Sequence

MARPGALLLAVAVAALLAAAVPGARGFYLPGSYPHKYNVGDDLNVKVNSLTSIDTEMPFS
YYSLPFCEPQDGVKDSAENLGELLMGDRIENSPYRFRMYTNESDVFLCRSPPLGADAFSL
LKKRIDEMYQVNLILDNLPAIRYTRKDDYIMRWTGYPVGIRVGVDYYVFNHLQFTVLVHK
YEDANVARVIGAADATDAIPSGAKDAASSSPGWMVVGFEVVPCSIKHNPEDVKSRKMYDS
YPSKIKCDPTTVSMSIKENEPIVYTYEVNFVESDIKWPSRWDAYLKMEGAKVHWFSILNS
LMVIAFLAGIVFVILLRTVRRDLTKYEELDSEAQAQMNEELSGWKLVVSDVFRAPSNPML
LCIMVGDGVQILGMAVVTILFAALGFMSPASRGTLITGMLFFYLVLGILAGYVGVRVWKT
IKCGDHSGWVAVSWRVACFFPGIAFLILTTLNFLLWGSHSTGAIPFSLFVVLLLLWFCIS
VPLTLVGGFLGAKAPHIEYPVRTNQIPREIPPQKYPSWLLVLGAGTLPFGTLFIELFFIM
SSIWMGRVYYVFGFLFVVLLLLVIVCAEVSLVLTYMHLCVEDWKWWWKSFFSSGSVAIYI
FLYSINYLIFDLKSLSGPVSATLYIGYSLFMVIAIMLATGTVGFISSFCFVHYLFSSVKA
D

Transcript Sequence

Transcript ID

Zm00001d018389_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:5:219814555:219816540:-1 gene:Zm00001d018389 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane 9 superfamily protein member 2

Sequence

ATGGCTCGCCCCGGCGCGCTCCTCCTCGCCGTCGCGGTGGCCGCGCTGCTCGCGGCCGCA
GTGCCGGGCGCCCGCGGATTCTACCTCCCGGGGAGCTACCCGCACAAGTACAACGTCGGG
GACGACCTCAACGTGAAGGTGAACTCCCTCACCTCCATCGACACCGAGATGCCCTTCAGC
TACTACAGCCTCCCCTTTTGCGAGCCACAAGACGGTGTCAAGGACAGCGCCGAGAACCTC
GGCGAGCTCCTCATGGGCGACCGCATCGAGAACTCGCCCTACCGCTTCCGCATGTACACC
AACGAGTCAGACGTCTTCCTCTGCCGCTCCCCACCGCTGGGCGCCGACGCCTTCTCTCTC
CTCAAGAAGCGCATCGACGAGATGTACCAGGTCAACCTCATCCTAGACAACCTCCCCGCC
ATCCGCTACACCAGGAAGGACGACTACATCATGCGCTGGACGGGGTACCCCGTCGGGATC
CGCGTCGGCGTCGACTACTACGTCTTCAACCACCTCCAGTTCACCGTCCTCGTCCACAAG
TACGAGGATGCCAATGTCGCGCGCGTCATAGGCGCCGCCGACGCCACCGACGCCATCCCC
TCCGGGGCTAAGGATGCCGCCTCCTCCTCCCCTGGATGGATGGTGGTCGGGTTCGAGGTT
GTGCCCTGCAGTATCAAGCACAACCCAGAGGACGTCAAGTCGCGCAAGATGTACGACAGC
TACCCCAGCAAGATCAAGTGCGACCCGACCACCGTGTCCATGAGCATCAAGGAGAACGAG
CCTATTGTCTACACCTATGAGGTGAACTTCGTGGAAAGCGACATCAAGTGGCCCTCCAGG
TGGGATGCCTACCTCAAGATGGAGGGGGCCAAGGTGCACTGGTTCTCCATTCTCAACTCC
CTCATGGTGATTGCCTTCCTTGCTGGTATTGTCTTTGTCATTTTGCTGAGGACCGTGAGG
CGTGATCTCACCAAGTACGAGGAGCTTGACAGTGAAGCGCAGGCCCAGATGAATGAGGAG
CTGTCCGGATGGAAGCTTGTGGTCAGTGATGTGTTCCGTGCGCCAAGCAACCCGATGCTG
CTTTGTATCATGGTTGGGGACGGTGTTCAGATCCTTGGGATGGCGGTTGTGACCATTCTC
TTTGCTGCGCTCGGGTTCATGTCCCCAGCCTCCCGTGGTACTCTGATCACGGGCATGCTG
TTCTTCTATCTGGTCCTTGGAATCCTGGCTGGATATGTTGGTGTTCGCGTATGGAAGACG
ATCAAGTGTGGGGATCACTCTGGGTGGGTCGCTGTGTCGTGGCGGGTGGCTTGCTTCTTC
CCCGGCATTGCATTCCTGATCCTGACCACACTCAACTTCCTATTGTGGGGAAGCCACAGC
ACTGGTGCCATCCCTTTCTCATTGTTCGTTGTGCTGCTTCTGCTCTGGTTCTGCATCTCC
GTGCCGCTCACGCTTGTTGGCGGGTTCCTTGGTGCCAAGGCTCCACATATTGAGTACCCT
GTCCGCACGAACCAGATCCCTCGTGAAATCCCTCCTCAGAAGTACCCATCCTGGTTGTTG
GTTCTTGGTGCTGGCACACTGCCCTTCGGCACCCTATTCATCGAGCTCTTCTTCATCATG
TCAAGCATATGGATGGGTCGTGTGTACTATGTCTTTGGGTTCCTCTTCGTCGTCTTGCTG
CTCCTGGTTATTGTCTGTGCTGAAGTTTCCCTGGTTCTAACTTACATGCACCTGTGTGTT
GAGGATTGGAAGTGGTGGTGGAAGTCATTCTTCTCATCTGGATCGGTGGCAATCTACATT
TTCTTGTACTCCATCAACTATCTTATTTTTGACCTCAAAAGCCTGAGTGGGCCAGTGTCT
GCTACCCTCTACATCGGTTACTCACTCTTCATGGTGATTGCTATCATGCTGGCAACTGGC
ACAGTTGGGTTTATTTCTTCATTCTGCTTCGTCCACTATCTTTTCTCATCGGTGAAAGCA
GATTAA